Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 MIR548A3-201ENST00000385297 97 ntBASIC1.57□□□□□ -2.16
DKK3Q9UBP4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.57□□□□□ -2.16
DKK3Q9UBP4 POLR2J4-204ENST00000418424 324 ntBASIC1.57□□□□□ -2.16
DKK3Q9UBP4 RNU1-123P-201ENST00000458950 160 ntBASIC1.57□□□□□ -2.16
DKK3Q9UBP4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.57□□□□□ -2.16
DKK3Q9UBP4 MIR6717-201ENST00000622747 73 ntBASIC1.57□□□□□ -2.16
DKK3Q9UBP4 Y_RNA.36-201ENST00000362602 112 ntBASIC1.56□□□□□ -2.16
DKK3Q9UBP4 RNU6-60P-201ENST00000364792 103 ntBASIC1.56□□□□□ -2.16
DKK3Q9UBP4 RNU6-1325P-201ENST00000364905 105 ntBASIC1.56□□□□□ -2.16
DKK3Q9UBP4 MIR150-201ENST00000385048 84 ntBASIC1.56□□□□□ -2.16
DKK3Q9UBP4 AL022718.1-201ENST00000412004 84 ntBASIC1.56□□□□□ -2.16
DKK3Q9UBP4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.56□□□□□ -2.16
DKK3Q9UBP4 Y_RNA.649-201ENST00000459077 103 ntBASIC1.56□□□□□ -2.16
DKK3Q9UBP4 RNU7-123P-201ENST00000515911 60 ntBASIC1.56□□□□□ -2.16
DKK3Q9UBP4 RNU2-35P-201ENST00000516446 142 ntBASIC1.56□□□□□ -2.16
DKK3Q9UBP4 RNU6-922P-201ENST00000516753 99 ntBASIC1.56□□□□□ -2.16
DKK3Q9UBP4 MIR4251-201ENST00000635819 61 ntBASIC1.56□□□□□ -2.16
DKK3Q9UBP4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
DKK3Q9UBP4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
DKK3Q9UBP4 SNORD115-2-201ENST00000362842 82 ntBASIC1.55□□□□□ -2.16
DKK3Q9UBP4 RNU4-16P-201ENST00000364737 141 ntBASIC1.55□□□□□ -2.16
DKK3Q9UBP4 SNORD115-20-201ENST00000365099 82 ntBASIC1.55□□□□□ -2.16
DKK3Q9UBP4 RNU6-429P-201ENST00000384582 108 ntBASIC1.55□□□□□ -2.16
DKK3Q9UBP4 RNU7-45P-201ENST00000459460 63 ntBASIC1.55□□□□□ -2.16
DKK3Q9UBP4 AC079140.2-201ENST00000506193 142 ntBASIC1.55□□□□□ -2.16
DKK3Q9UBP4 RNU7-41P-201ENST00000515917 61 ntBASIC1.55□□□□□ -2.16
DKK3Q9UBP4 SNORD111.1-201ENST00000516421 86 ntBASIC1.55□□□□□ -2.16
DKK3Q9UBP4 RNA5SP102-201ENST00000516865 106 ntBASIC1.55□□□□□ -2.16
DKK3Q9UBP4 AL121890.5-201ENST00000620848 304 ntBASIC1.55□□□□□ -2.16
DKK3Q9UBP4 Z97988.1-201ENST00000637697 135 ntBASIC1.55□□□□□ -2.16
DKK3Q9UBP4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
DKK3Q9UBP4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
DKK3Q9UBP4 RNA5SP48-201ENST00000363969 126 ntBASIC1.54□□□□□ -2.16
DKK3Q9UBP4 Y_RNA.213-201ENST00000364178 111 ntBASIC1.54□□□□□ -2.16
DKK3Q9UBP4 MIR759-201ENST00000390224 91 ntBASIC1.54□□□□□ -2.16
DKK3Q9UBP4 SNORA67.6-201ENST00000391093 99 ntBASIC1.54□□□□□ -2.16
DKK3Q9UBP4 AC027119.1-201ENST00000440877 241 ntBASIC1.54□□□□□ -2.16
DKK3Q9UBP4 RNU6-589P-201ENST00000516485 107 ntBASIC1.54□□□□□ -2.16
DKK3Q9UBP4 RNU6-919P-201ENST00000516731 104 ntBASIC1.54□□□□□ -2.16
DKK3Q9UBP4 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.54□□□□□ -2.16
DKK3Q9UBP4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.54□□□□□ -2.16
DKK3Q9UBP4 MTND5P34-201ENST00000568888 325 ntBASIC1.54□□□□□ -2.16
DKK3Q9UBP4 MIR6515-201ENST00000619843 57 ntBASIC1.54□□□□□ -2.16
DKK3Q9UBP4 MIR8063-201ENST00000621930 81 ntBASIC1.54□□□□□ -2.16
DKK3Q9UBP4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.54□□□□□ -2.16
DKK3Q9UBP4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
DKK3Q9UBP4 SNORA22.1-201ENST00000362701 134 ntBASIC1.53□□□□□ -2.16
DKK3Q9UBP4 SNORD116-21-201ENST00000384507 92 ntBASIC1.53□□□□□ -2.16
DKK3Q9UBP4 Y_RNA.531-201ENST00000384589 121 ntBASIC1.53□□□□□ -2.16
DKK3Q9UBP4 RNU6-1190P-201ENST00000410811 104 ntBASIC1.53□□□□□ -2.16
DKK3Q9UBP4 RPS3AP1-201ENST00000413190 320 ntBASIC1.53□□□□□ -2.16
DKK3Q9UBP4 AC004812.1-201ENST00000540773 146 ntBASIC1.53□□□□□ -2.16
DKK3Q9UBP4 MIR4679-2-201ENST00000578358 77 ntBASIC1.53□□□□□ -2.16
DKK3Q9UBP4 MIR6129-201ENST00000616087 109 ntBASIC1.53□□□□□ -2.16
DKK3Q9UBP4 RNY4P6-201ENST00000363667 96 ntBASIC1.52□□□□□ -2.17
DKK3Q9UBP4 SNORA7.1-201ENST00000363750 139 ntBASIC1.52□□□□□ -2.17
DKK3Q9UBP4 RNU1-42P-201ENST00000364033 160 ntBASIC1.52□□□□□ -2.17
DKK3Q9UBP4 SNORA1.1-201ENST00000364671 133 ntBASIC1.52□□□□□ -2.17
DKK3Q9UBP4 Y_RNA.299-201ENST00000364973 94 ntBASIC1.52□□□□□ -2.17
DKK3Q9UBP4 Y_RNA.354-201ENST00000365448 111 ntBASIC1.52□□□□□ -2.17
DKK3Q9UBP4 RNU6-1065P-201ENST00000384513 106 ntBASIC1.52□□□□□ -2.17
DKK3Q9UBP4 RNU6-1104P-201ENST00000384723 104 ntBASIC1.52□□□□□ -2.17
DKK3Q9UBP4 MIR1323-201ENST00000408090 73 ntBASIC1.52□□□□□ -2.17
DKK3Q9UBP4 AL512326.2-201ENST00000426359 151 ntBASIC1.52□□□□□ -2.17
DKK3Q9UBP4 RPL30P7-201ENST00000479312 323 ntBASIC1.52□□□□□ -2.17
DKK3Q9UBP4 Y_RNA.709-201ENST00000516952 92 ntBASIC1.52□□□□□ -2.17
DKK3Q9UBP4 SNORA31.24-201ENST00000517232 57 ntBASIC1.52□□□□□ -2.17
DKK3Q9UBP4 MIR548AO-201ENST00000579992 96 ntBASIC1.52□□□□□ -2.17
DKK3Q9UBP4 MIR3192-201ENST00000584920 77 ntBASIC1.52□□□□□ -2.17
DKK3Q9UBP4 AL645939.4-201ENST00000604495 135 ntBASIC1.52□□□□□ -2.17
DKK3Q9UBP4 AL096861.1-201ENST00000610899 123 ntBASIC1.52□□□□□ -2.17
DKK3Q9UBP4 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.52□□□□□ -2.17
DKK3Q9UBP4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.52□□□□□ -2.17
DKK3Q9UBP4 AP000648.3-201ENST00000623539 4507 ntBASIC1.51□□□□□ -2.17
DKK3Q9UBP4 Y_RNA.81-201ENST00000362997 102 ntBASIC1.51□□□□□ -2.17
DKK3Q9UBP4 RNU6-342P-201ENST00000384521 104 ntBASIC1.51□□□□□ -2.17
DKK3Q9UBP4 RNU6-880P-201ENST00000384526 107 ntBASIC1.51□□□□□ -2.17
DKK3Q9UBP4 AL035461.1-201ENST00000421490 332 ntBASIC1.51□□□□□ -2.17
DKK3Q9UBP4 RPS23P4-201ENST00000487908 423 ntBASIC1.51□□□□□ -2.17
DKK3Q9UBP4 AL157834.3-201ENST00000615543 103 ntBASIC1.51□□□□□ -2.17
DKK3Q9UBP4 Y_RNA.374-201ENST00000365606 101 ntBASIC1.5□□□□□ -2.17
DKK3Q9UBP4 MIR548A1-201ENST00000385041 97 ntBASIC1.5□□□□□ -2.17
DKK3Q9UBP4 MT-TI-201ENST00000387365 69 ntBASIC1.5□□□□□ -2.17
DKK3Q9UBP4 RNY4P18-201ENST00000391107 89 ntBASIC1.5□□□□□ -2.17
DKK3Q9UBP4 RPL39P39-201ENST00000455840 151 ntBASIC1.5□□□□□ -2.17
DKK3Q9UBP4 RNU7-113P-201ENST00000459273 62 ntBASIC1.5□□□□□ -2.17
DKK3Q9UBP4 AL133373.1-201ENST00000497098 94 ntBASIC1.5□□□□□ -2.17
DKK3Q9UBP4 AC113410.1-201ENST00000505029 247 ntBASIC1.5□□□□□ -2.17
DKK3Q9UBP4 RNU6-1258P-201ENST00000516911 111 ntBASIC1.5□□□□□ -2.17
DKK3Q9UBP4 AC007012.1-201ENST00000567192 175 ntBASIC1.5□□□□□ -2.17
DKK3Q9UBP4 MIR3664-201ENST00000579074 99 ntBASIC1.5□□□□□ -2.17
DKK3Q9UBP4 MIR3163-201ENST00000581592 73 ntBASIC1.5□□□□□ -2.17
DKK3Q9UBP4 AC022709.1-201ENST00000615967 87 ntBASIC1.5□□□□□ -2.17
DKK3Q9UBP4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
DKK3Q9UBP4 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.5□□□□□ -2.17
DKK3Q9UBP4 Y_RNA.281-201ENST00000364774 94 ntBASIC1.49□□□□□ -2.17
DKK3Q9UBP4 SNORD114-22-201ENST00000365423 72 ntBASIC1.49□□□□□ -2.17
DKK3Q9UBP4 MIR1304-201ENST00000408243 91 ntBASIC1.49□□□□□ -2.17
DKK3Q9UBP4 RNU6-602P-201ENST00000411155 105 ntBASIC1.49□□□□□ -2.17
DKK3Q9UBP4 AC063976.4-201ENST00000421971 163 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 164.4 ms