Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 SNORD38.1-201ENST00000363863 68 ntBASIC2.35□□□□□ -2.03
CNTN3Q9P232 RNA5SP48-201ENST00000363969 126 ntBASIC2.35□□□□□ -2.03
CNTN3Q9P232 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CNTN3Q9P232 SNORA48.3-201ENST00000391081 134 ntBASIC2.35□□□□□ -2.03
CNTN3Q9P232 RNU6-887P-201ENST00000410660 100 ntBASIC2.35□□□□□ -2.03
CNTN3Q9P232 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.35□□□□□ -2.03
CNTN3Q9P232 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.35□□□□□ -2.03
CNTN3Q9P232 AC091304.10-201ENST00000641554 121 ntBASIC2.35□□□□□ -2.03
CNTN3Q9P232 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CNTN3Q9P232 SNORA64-201ENST00000384674 134 ntBASIC2.34□□□□□ -2.03
CNTN3Q9P232 RNU2-40P-201ENST00000410833 196 ntBASIC2.34□□□□□ -2.03
CNTN3Q9P232 AC104435.1-201ENST00000483483 166 ntBASIC2.34□□□□□ -2.03
CNTN3Q9P232 AC022254.1-201ENST00000567857 235 ntBASIC2.34□□□□□ -2.03
CNTN3Q9P232 MIR548Z-201ENST00000584743 97 ntBASIC2.34□□□□□ -2.03
CNTN3Q9P232 AL357312.1-201ENST00000603879 298 ntBASIC2.34□□□□□ -2.03
CNTN3Q9P232 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.34□□□□□ -2.03
CNTN3Q9P232 AL445685.2-201ENST00000422551 342 ntBASIC2.33□□□□□ -2.04
CNTN3Q9P232 RNU7-41P-201ENST00000515917 61 ntBASIC2.33□□□□□ -2.04
CNTN3Q9P232 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CNTN3Q9P232 AL596028.1-201ENST00000326971 197 ntBASIC2.32□□□□□ -2.04
CNTN3Q9P232 Y_RNA.17-201ENST00000362433 111 ntBASIC2.32□□□□□ -2.04
CNTN3Q9P232 RNU6-865P-201ENST00000364772 107 ntBASIC2.32□□□□□ -2.04
CNTN3Q9P232 RNU6-1152P-201ENST00000384576 107 ntBASIC2.32□□□□□ -2.04
CNTN3Q9P232 RNU6-813P-201ENST00000384691 107 ntBASIC2.32□□□□□ -2.04
CNTN3Q9P232 AL356379.1-201ENST00000414105 126 ntBASIC2.32□□□□□ -2.04
CNTN3Q9P232 AC090844.1-201ENST00000422019 156 ntBASIC2.32□□□□□ -2.04
CNTN3Q9P232 UBL5P1-201ENST00000507979 193 ntBASIC2.32□□□□□ -2.04
CNTN3Q9P232 RNU6-162P-201ENST00000516228 103 ntBASIC2.32□□□□□ -2.04
CNTN3Q9P232 SNORD67.1-201ENST00000516618 108 ntBASIC2.32□□□□□ -2.04
CNTN3Q9P232 MIR514B-201ENST00000516774 80 ntBASIC2.32□□□□□ -2.04
CNTN3Q9P232 MIR219B-201ENST00000637023 88 ntBASIC2.32□□□□□ -2.04
CNTN3Q9P232 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CNTN3Q9P232 Y_RNA.140-201ENST00000363474 103 ntBASIC2.31□□□□□ -2.04
CNTN3Q9P232 RNA5SP173-201ENST00000364857 136 ntBASIC2.31□□□□□ -2.04
CNTN3Q9P232 Y_RNA.467-201ENST00000384297 102 ntBASIC2.31□□□□□ -2.04
CNTN3Q9P232 RPL31P63-201ENST00000422565 375 ntBASIC2.31□□□□□ -2.04
CNTN3Q9P232 RPS29P28-201ENST00000446439 141 ntBASIC2.31□□□□□ -2.04
CNTN3Q9P232 AC009474.2-201ENST00000451383 136 ntBASIC2.31□□□□□ -2.04
CNTN3Q9P232 SNORD111.1-201ENST00000516421 86 ntBASIC2.31□□□□□ -2.04
CNTN3Q9P232 RNU6-1006P-201ENST00000516998 103 ntBASIC2.31□□□□□ -2.04
CNTN3Q9P232 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CNTN3Q9P232 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.3□□□□□ -2.04
CNTN3Q9P232 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
CNTN3Q9P232 Y_RNA.98-201ENST00000363109 102 ntBASIC2.3□□□□□ -2.04
CNTN3Q9P232 SNORA67.3-201ENST00000384366 140 ntBASIC2.3□□□□□ -2.04
CNTN3Q9P232 BTF3P4-201ENST00000418852 495 ntBASIC2.3□□□□□ -2.04
CNTN3Q9P232 AC109327.2-201ENST00000448339 378 ntBASIC2.3□□□□□ -2.04
CNTN3Q9P232 snoU13.15-201ENST00000459407 104 ntBASIC2.3□□□□□ -2.04
CNTN3Q9P232 RNU7-137P-201ENST00000516788 62 ntBASIC2.3□□□□□ -2.04
CNTN3Q9P232 MIR376B-201ENST00000614515 100 ntBASIC2.3□□□□□ -2.04
CNTN3Q9P232 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
CNTN3Q9P232 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.29□□□□□ -2.04
CNTN3Q9P232 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CNTN3Q9P232 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
CNTN3Q9P232 SNORD116-10-201ENST00000363791 102 ntBASIC2.29□□□□□ -2.04
CNTN3Q9P232 Y_RNA.448-201ENST00000384185 108 ntBASIC2.29□□□□□ -2.04
CNTN3Q9P232 SNORD38.2-201ENST00000384470 69 ntBASIC2.29□□□□□ -2.04
CNTN3Q9P232 SNORD41-201ENST00000386967 70 ntBASIC2.29□□□□□ -2.04
CNTN3Q9P232 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CNTN3Q9P232 Y_RNA.593-201ENST00000410292 98 ntBASIC2.29□□□□□ -2.04
CNTN3Q9P232 RNA5SP237-201ENST00000410414 113 ntBASIC2.29□□□□□ -2.04
CNTN3Q9P232 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.29□□□□□ -2.04
CNTN3Q9P232 AP003327.1-201ENST00000529684 127 ntBASIC2.29□□□□□ -2.04
CNTN3Q9P232 IGLL4P-201ENST00000614590 133 ntBASIC2.29□□□□□ -2.04
CNTN3Q9P232 MIR8074-201ENST00000615081 81 ntBASIC2.29□□□□□ -2.04
CNTN3Q9P232 MIR494-201ENST00000349529 81 ntBASIC2.28□□□□□ -2.04
CNTN3Q9P232 SNORD114-1-201ENST00000362705 72 ntBASIC2.28□□□□□ -2.04
CNTN3Q9P232 RNY1P10-201ENST00000363268 113 ntBASIC2.28□□□□□ -2.04
CNTN3Q9P232 SNORD116-22-201ENST00000384430 92 ntBASIC2.28□□□□□ -2.04
CNTN3Q9P232 MIR34C-201ENST00000384831 77 ntBASIC2.28□□□□□ -2.04
CNTN3Q9P232 AC019129.1-201ENST00000403786 261 ntBASIC2.28□□□□□ -2.04
CNTN3Q9P232 HMGN2P19-201ENST00000425149 265 ntBASIC2.28□□□□□ -2.04
CNTN3Q9P232 AL096840.1-201ENST00000603287 93 ntBASIC2.28□□□□□ -2.04
CNTN3Q9P232 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.28□□□□□ -2.04
CNTN3Q9P232 RNY1P1-201ENST00000364372 112 ntBASIC2.27□□□□□ -2.05
CNTN3Q9P232 Y_RNA.247-201ENST00000364500 92 ntBASIC2.27□□□□□ -2.05
CNTN3Q9P232 SNORD58A-201ENST00000383875 65 ntBASIC2.27□□□□□ -2.05
CNTN3Q9P232 RNU6-1237P-201ENST00000384777 107 ntBASIC2.27□□□□□ -2.05
CNTN3Q9P232 RNU6-1321P-201ENST00000390905 107 ntBASIC2.27□□□□□ -2.05
CNTN3Q9P232 U8.15-201ENST00000390947 134 ntBASIC2.27□□□□□ -2.05
CNTN3Q9P232 RNU7-48P-201ENST00000458875 63 ntBASIC2.27□□□□□ -2.05
CNTN3Q9P232 snoU13.26-201ENST00000459452 105 ntBASIC2.27□□□□□ -2.05
CNTN3Q9P232 AC079804.2-201ENST00000490376 200 ntBASIC2.27□□□□□ -2.05
CNTN3Q9P232 AC015688.6-201ENST00000577737 104 ntBASIC2.27□□□□□ -2.05
CNTN3Q9P232 SNORA77B-201ENST00000578179 125 ntBASIC2.27□□□□□ -2.05
CNTN3Q9P232 RNU6-90P-201ENST00000606352 106 ntBASIC2.27□□□□□ -2.05
CNTN3Q9P232 GHRLOS.1-201ENST00000610995 70 ntBASIC2.27□□□□□ -2.05
CNTN3Q9P232 ZNF355P-201ENST00000427301 3216 ntBASIC2.27□□□□□ -2.05
CNTN3Q9P232 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
CNTN3Q9P232 MIRLET7G-201ENST00000362280 84 ntBASIC2.26□□□□□ -2.05
CNTN3Q9P232 Y_RNA.190-201ENST00000363964 101 ntBASIC2.26□□□□□ -2.05
CNTN3Q9P232 RNU6-1163P-201ENST00000364516 107 ntBASIC2.26□□□□□ -2.05
CNTN3Q9P232 RNY1P13-201ENST00000365030 105 ntBASIC2.26□□□□□ -2.05
CNTN3Q9P232 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CNTN3Q9P232 RNU6-1307P-201ENST00000391012 103 ntBASIC2.26□□□□□ -2.05
CNTN3Q9P232 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CNTN3Q9P232 HSPE1P24-201ENST00000450782 238 ntBASIC2.26□□□□□ -2.05
CNTN3Q9P232 RNU6-922P-201ENST00000516753 99 ntBASIC2.26□□□□□ -2.05
CNTN3Q9P232 AC141846.1-201ENST00000568348 142 ntBASIC2.26□□□□□ -2.05
CNTN3Q9P232 MIR5002-201ENST00000584713 97 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 176.1 ms