Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 MIR3121-201ENST00000579680 77 ntBASIC1.31□□□□□ -2.2
COL20A1Q9P218 AC027335.2-201ENST00000624030 375 ntBASIC1.31□□□□□ -2.2
COL20A1Q9P218 MIR6516-201ENST00000630554 81 ntBASIC1.31□□□□□ -2.2
COL20A1Q9P218 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
COL20A1Q9P218 RNU6-704P-201ENST00000364162 103 ntBASIC1.3□□□□□ -2.2
COL20A1Q9P218 AC063976.4-201ENST00000421971 163 ntBASIC1.3□□□□□ -2.2
COL20A1Q9P218 MIR377-201ENST00000362145 69 ntBASIC1.29□□□□□ -2.2
COL20A1Q9P218 RNU1-93P-201ENST00000364704 169 ntBASIC1.29□□□□□ -2.2
COL20A1Q9P218 HMGN1P33-201ENST00000432945 451 ntBASIC1.29□□□□□ -2.2
COL20A1Q9P218 AL078603.1-201ENST00000603824 313 ntBASIC1.29□□□□□ -2.2
COL20A1Q9P218 MIR6841-201ENST00000637129 72 ntBASIC1.29□□□□□ -2.2
COL20A1Q9P218 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
COL20A1Q9P218 AC008163.1-202ENST00000636004 2889 ntBASIC1.28□□□□□ -2.2
COL20A1Q9P218 RNU6-690P-201ENST00000365242 106 ntBASIC1.28□□□□□ -2.2
COL20A1Q9P218 RNU6-42P-201ENST00000384165 107 ntBASIC1.28□□□□□ -2.2
COL20A1Q9P218 MIR489-201ENST00000384923 84 ntBASIC1.28□□□□□ -2.2
COL20A1Q9P218 MIR150-201ENST00000385048 84 ntBASIC1.28□□□□□ -2.2
COL20A1Q9P218 MIR618-201ENST00000385287 98 ntBASIC1.28□□□□□ -2.2
COL20A1Q9P218 RNU6-257P-201ENST00000410238 98 ntBASIC1.28□□□□□ -2.2
COL20A1Q9P218 RNU6-1190P-201ENST00000410811 104 ntBASIC1.28□□□□□ -2.2
COL20A1Q9P218 RNU6-602P-201ENST00000411155 105 ntBASIC1.28□□□□□ -2.2
COL20A1Q9P218 MTND4LP9-201ENST00000427694 174 ntBASIC1.28□□□□□ -2.2
COL20A1Q9P218 RNU7-45P-201ENST00000459460 63 ntBASIC1.28□□□□□ -2.2
COL20A1Q9P218 RNU7-40P-201ENST00000516397 64 ntBASIC1.28□□□□□ -2.2
COL20A1Q9P218 RNU6-406P-201ENST00000516470 107 ntBASIC1.28□□□□□ -2.2
COL20A1Q9P218 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
COL20A1Q9P218 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.21
COL20A1Q9P218 Y_RNA.168-201ENST00000363740 102 ntBASIC1.27□□□□□ -2.21
COL20A1Q9P218 SNORD113.3-201ENST00000364630 78 ntBASIC1.27□□□□□ -2.21
COL20A1Q9P218 SNORD111-201ENST00000408139 94 ntBASIC1.27□□□□□ -2.21
COL20A1Q9P218 AC002429.1-201ENST00000437672 148 ntBASIC1.27□□□□□ -2.21
COL20A1Q9P218 RNA5SP272-201ENST00000516095 111 ntBASIC1.27□□□□□ -2.21
COL20A1Q9P218 MIR3910-1-201ENST00000580936 111 ntBASIC1.27□□□□□ -2.21
COL20A1Q9P218 AL157777.2-201ENST00000258070 137 ntBASIC1.26□□□□□ -2.21
COL20A1Q9P218 RNU6-647P-201ENST00000364243 107 ntBASIC1.26□□□□□ -2.21
COL20A1Q9P218 Y_RNA.280-201ENST00000364765 112 ntBASIC1.26□□□□□ -2.21
COL20A1Q9P218 MIR539-201ENST00000365690 78 ntBASIC1.26□□□□□ -2.21
COL20A1Q9P218 MIR19B1-201ENST00000384829 87 ntBASIC1.26□□□□□ -2.21
COL20A1Q9P218 Y_RNA.586-201ENST00000391146 98 ntBASIC1.26□□□□□ -2.21
COL20A1Q9P218 AC090844.1-201ENST00000422019 156 ntBASIC1.26□□□□□ -2.21
COL20A1Q9P218 RNA5SP220-201ENST00000516298 104 ntBASIC1.26□□□□□ -2.21
COL20A1Q9P218 RNU6-789P-201ENST00000517105 102 ntBASIC1.26□□□□□ -2.21
COL20A1Q9P218 AC133485.4-201ENST00000561835 220 ntBASIC1.26□□□□□ -2.21
COL20A1Q9P218 AC138907.4-201ENST00000570107 226 ntBASIC1.26□□□□□ -2.21
COL20A1Q9P218 MIR6734-201ENST00000621166 68 ntBASIC1.26□□□□□ -2.21
COL20A1Q9P218 SNORA22.1-201ENST00000362701 134 ntBASIC1.25□□□□□ -2.21
COL20A1Q9P218 RNU6-508P-201ENST00000363231 103 ntBASIC1.25□□□□□ -2.21
COL20A1Q9P218 Y_RNA.114-201ENST00000363265 113 ntBASIC1.25□□□□□ -2.21
COL20A1Q9P218 RNU6-654P-201ENST00000364373 107 ntBASIC1.25□□□□□ -2.21
COL20A1Q9P218 SNORA2B-201ENST00000384583 137 ntBASIC1.25□□□□□ -2.21
COL20A1Q9P218 RNA5SP144-201ENST00000410846 116 ntBASIC1.25□□□□□ -2.21
COL20A1Q9P218 AL022718.1-201ENST00000412004 84 ntBASIC1.25□□□□□ -2.21
COL20A1Q9P218 TMSB4XP3-201ENST00000445144 114 ntBASIC1.25□□□□□ -2.21
COL20A1Q9P218 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.25□□□□□ -2.21
COL20A1Q9P218 HSPE1P19-201ENST00000603327 295 ntBASIC1.25□□□□□ -2.21
COL20A1Q9P218 AC106800.4-201ENST00000614905 153 ntBASIC1.25□□□□□ -2.21
COL20A1Q9P218 U2.22-201ENST00000636441 106 ntBASIC1.25□□□□□ -2.21
COL20A1Q9P218 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.24□□□□□ -2.21
COL20A1Q9P218 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
COL20A1Q9P218 RNU1-124P-201ENST00000363861 145 ntBASIC1.24□□□□□ -2.21
COL20A1Q9P218 Y_RNA.191-201ENST00000363972 113 ntBASIC1.24□□□□□ -2.21
COL20A1Q9P218 RNU4-16P-201ENST00000364737 141 ntBASIC1.24□□□□□ -2.21
COL20A1Q9P218 SNORA19-201ENST00000384737 128 ntBASIC1.24□□□□□ -2.21
COL20A1Q9P218 POLR2J4-204ENST00000418424 324 ntBASIC1.24□□□□□ -2.21
COL20A1Q9P218 AC244023.1-201ENST00000426884 112 ntBASIC1.24□□□□□ -2.21
COL20A1Q9P218 AL158147.1-201ENST00000443970 75 ntBASIC1.24□□□□□ -2.21
COL20A1Q9P218 RNU6-240P-201ENST00000516098 97 ntBASIC1.24□□□□□ -2.21
COL20A1Q9P218 RNA5SP404-201ENST00000517118 132 ntBASIC1.24□□□□□ -2.21
COL20A1Q9P218 AC036111.3-201ENST00000526389 112 ntBASIC1.24□□□□□ -2.21
COL20A1Q9P218 MIR4452-201ENST00000583004 71 ntBASIC1.24□□□□□ -2.21
COL20A1Q9P218 MIR4305-201ENST00000583252 102 ntBASIC1.24□□□□□ -2.21
COL20A1Q9P218 MIR4295-201ENST00000585286 85 ntBASIC1.24□□□□□ -2.21
COL20A1Q9P218 AC242498.1-201ENST00000604134 111 ntBASIC1.24□□□□□ -2.21
COL20A1Q9P218 RNU6-580P-201ENST00000365159 107 ntBASIC1.23□□□□□ -2.21
COL20A1Q9P218 RNU6-939P-201ENST00000384634 107 ntBASIC1.23□□□□□ -2.21
COL20A1Q9P218 MIR200A-201ENST00000384875 90 ntBASIC1.23□□□□□ -2.21
COL20A1Q9P218 RNU6-205P-201ENST00000390858 107 ntBASIC1.23□□□□□ -2.21
COL20A1Q9P218 RNU5E-3P-201ENST00000515913 68 ntBASIC1.23□□□□□ -2.21
COL20A1Q9P218 AC023827.1-201ENST00000569247 97 ntBASIC1.23□□□□□ -2.21
COL20A1Q9P218 AC021443.1-201ENST00000604478 211 ntBASIC1.23□□□□□ -2.21
COL20A1Q9P218 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.23□□□□□ -2.21
COL20A1Q9P218 AC132825.6-201ENST00000638861 357 ntBASIC1.23□□□□□ -2.21
COL20A1Q9P218 RNU7-62P-201ENST00000458856 62 ntBASIC1.22□□□□□ -2.21
COL20A1Q9P218 AC087343.1-201ENST00000477341 475 ntBASIC1.22□□□□□ -2.21
COL20A1Q9P218 SNORA4-201ENST00000584302 138 ntBASIC1.22□□□□□ -2.21
COL20A1Q9P218 SNORD114-21-201ENST00000606412 72 ntBASIC1.22□□□□□ -2.21
COL20A1Q9P218 AL137067.1-201ENST00000615933 120 ntBASIC1.22□□□□□ -2.21
COL20A1Q9P218 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
COL20A1Q9P218 Y_RNA.366-201ENST00000365540 102 ntBASIC1.21□□□□□ -2.22
COL20A1Q9P218 AC067940.1-201ENST00000458411 300 ntBASIC1.21□□□□□ -2.22
COL20A1Q9P218 snoU13.2-201ENST00000459201 104 ntBASIC1.21□□□□□ -2.22
COL20A1Q9P218 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.21□□□□□ -2.22
COL20A1Q9P218 AC108081.1-201ENST00000604358 221 ntBASIC1.21□□□□□ -2.22
COL20A1Q9P218 AC012676.2-201ENST00000619258 186 ntBASIC1.21□□□□□ -2.22
COL20A1Q9P218 SNORD115-2-201ENST00000362842 82 ntBASIC1.2□□□□□ -2.22
COL20A1Q9P218 SNORD115-20-201ENST00000365099 82 ntBASIC1.2□□□□□ -2.22
COL20A1Q9P218 RNU6-81P-201ENST00000365608 104 ntBASIC1.2□□□□□ -2.22
COL20A1Q9P218 MIR520E-201ENST00000384867 87 ntBASIC1.2□□□□□ -2.22
COL20A1Q9P218 MIR588-201ENST00000384900 83 ntBASIC1.2□□□□□ -2.22
COL20A1Q9P218 RNA5SP95-201ENST00000410319 137 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms