Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 RNU6-1258P-201ENST00000516911 111 ntBASIC1.23□□□□□ -2.21
DDX56Q9NY93 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.23□□□□□ -2.21
DDX56Q9NY93 AC011603.4-201ENST00000611325 277 ntBASIC1.23□□□□□ -2.21
DDX56Q9NY93 MIR6740-201ENST00000618268 113 ntBASIC1.23□□□□□ -2.21
DDX56Q9NY93 MIR6841-201ENST00000637129 72 ntBASIC1.23□□□□□ -2.21
DDX56Q9NY93 RNY1P5-201ENST00000383890 115 ntBASIC1.22□□□□□ -2.21
DDX56Q9NY93 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.22□□□□□ -2.21
DDX56Q9NY93 AP1B1P2-201ENST00000416196 106 ntBASIC1.22□□□□□ -2.21
DDX56Q9NY93 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.22□□□□□ -2.21
DDX56Q9NY93 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.22□□□□□ -2.21
DDX56Q9NY93 AP001328.1-201ENST00000528550 176 ntBASIC1.22□□□□□ -2.21
DDX56Q9NY93 MIR3121-201ENST00000579680 77 ntBASIC1.22□□□□□ -2.21
DDX56Q9NY93 AP001340.1-201ENST00000624405 217 ntBASIC1.22□□□□□ -2.21
DDX56Q9NY93 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
DDX56Q9NY93 RNU6-774P-201ENST00000363238 107 ntBASIC1.21□□□□□ -2.22
DDX56Q9NY93 Y_RNA.171-201ENST00000363760 102 ntBASIC1.21□□□□□ -2.22
DDX56Q9NY93 RNU6-1237P-201ENST00000384777 107 ntBASIC1.21□□□□□ -2.22
DDX56Q9NY93 RNA5SP144-201ENST00000410846 116 ntBASIC1.21□□□□□ -2.22
DDX56Q9NY93 BTF3P4-201ENST00000418852 495 ntBASIC1.21□□□□□ -2.22
DDX56Q9NY93 snoU13.2-201ENST00000459201 104 ntBASIC1.21□□□□□ -2.22
DDX56Q9NY93 snoU13.21-201ENST00000459368 105 ntBASIC1.21□□□□□ -2.22
DDX56Q9NY93 Y_RNA.692-201ENST00000516627 105 ntBASIC1.21□□□□□ -2.22
DDX56Q9NY93 Y_RNA.757-201ENST00000578934 114 ntBASIC1.21□□□□□ -2.22
DDX56Q9NY93 uc_338.6-201ENST00000613544 171 ntBASIC1.21□□□□□ -2.22
DDX56Q9NY93 AL353770.2-201ENST00000620024 78 ntBASIC1.21□□□□□ -2.22
DDX56Q9NY93 SNORD89-201ENST00000390981 114 ntBASIC1.2□□□□□ -2.22
DDX56Q9NY93 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.2□□□□□ -2.22
DDX56Q9NY93 AC108729.3-201ENST00000513484 108 ntBASIC1.2□□□□□ -2.22
DDX56Q9NY93 RNU6-113P-201ENST00000516653 101 ntBASIC1.2□□□□□ -2.22
DDX56Q9NY93 AC133485.4-201ENST00000561835 220 ntBASIC1.2□□□□□ -2.22
DDX56Q9NY93 AC138907.4-201ENST00000570107 226 ntBASIC1.2□□□□□ -2.22
DDX56Q9NY93 MIR4305-201ENST00000583252 102 ntBASIC1.2□□□□□ -2.22
DDX56Q9NY93 AC108081.1-201ENST00000604358 221 ntBASIC1.2□□□□□ -2.22
DDX56Q9NY93 snoU13.31-201ENST00000607291 104 ntBASIC1.2□□□□□ -2.22
DDX56Q9NY93 Y_RNA.294-201ENST00000364916 102 ntBASIC1.19□□□□□ -2.22
DDX56Q9NY93 RNU6-934P-201ENST00000365154 107 ntBASIC1.19□□□□□ -2.22
DDX56Q9NY93 Y_RNA.343-201ENST00000365354 112 ntBASIC1.19□□□□□ -2.22
DDX56Q9NY93 MIR100-201ENST00000385259 80 ntBASIC1.19□□□□□ -2.22
DDX56Q9NY93 MIR1285-1-201ENST00000408593 84 ntBASIC1.19□□□□□ -2.22
DDX56Q9NY93 MIR18B-201ENST00000454574 71 ntBASIC1.19□□□□□ -2.22
DDX56Q9NY93 AL157834.3-201ENST00000615543 103 ntBASIC1.19□□□□□ -2.22
DDX56Q9NY93 RNU1-36P-201ENST00000365130 165 ntBASIC1.18□□□□□ -2.22
DDX56Q9NY93 Y_RNA.338-201ENST00000365320 114 ntBASIC1.18□□□□□ -2.22
DDX56Q9NY93 Y_RNA.366-201ENST00000365540 102 ntBASIC1.18□□□□□ -2.22
DDX56Q9NY93 MIR1827-201ENST00000408549 66 ntBASIC1.18□□□□□ -2.22
DDX56Q9NY93 SNORD83.1-201ENST00000411362 77 ntBASIC1.18□□□□□ -2.22
DDX56Q9NY93 AL022718.1-201ENST00000412004 84 ntBASIC1.18□□□□□ -2.22
DDX56Q9NY93 RNU2-35P-201ENST00000516446 142 ntBASIC1.18□□□□□ -2.22
DDX56Q9NY93 MIR4498-201ENST00000577599 66 ntBASIC1.18□□□□□ -2.22
DDX56Q9NY93 MIR3133-201ENST00000583157 78 ntBASIC1.18□□□□□ -2.22
DDX56Q9NY93 AC021443.1-201ENST00000604478 211 ntBASIC1.18□□□□□ -2.22
DDX56Q9NY93 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.18□□□□□ -2.22
DDX56Q9NY93 AC010332.2-201ENST00000613083 1904 ntBASIC1.18□□□□□ -2.22
DDX56Q9NY93 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.17□□□□□ -2.22
DDX56Q9NY93 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
DDX56Q9NY93 AL512326.2-201ENST00000426359 151 ntBASIC1.17□□□□□ -2.22
DDX56Q9NY93 AC113410.1-201ENST00000505029 247 ntBASIC1.17□□□□□ -2.22
DDX56Q9NY93 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.17□□□□□ -2.22
DDX56Q9NY93 Y_RNA.568-201ENST00000384742 113 ntBASIC1.16□□□□□ -2.22
DDX56Q9NY93 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.16□□□□□ -2.22
DDX56Q9NY93 RNU6-1165P-201ENST00000410119 107 ntBASIC1.16□□□□□ -2.22
DDX56Q9NY93 RPS26P5-201ENST00000418544 335 ntBASIC1.16□□□□□ -2.22
DDX56Q9NY93 AC015818.7-201ENST00000428754 109 ntBASIC1.16□□□□□ -2.22
DDX56Q9NY93 AC087499.7-201ENST00000441958 109 ntBASIC1.16□□□□□ -2.22
DDX56Q9NY93 RNU7-164P-201ENST00000459221 62 ntBASIC1.16□□□□□ -2.22
DDX56Q9NY93 RNU7-113P-201ENST00000459273 62 ntBASIC1.16□□□□□ -2.22
DDX56Q9NY93 Y_RNA.114-201ENST00000363265 113 ntBASIC1.15□□□□□ -2.23
DDX56Q9NY93 Y_RNA.470-201ENST00000384307 117 ntBASIC1.15□□□□□ -2.23
DDX56Q9NY93 RNU6-342P-201ENST00000384521 104 ntBASIC1.15□□□□□ -2.23
DDX56Q9NY93 MIR563-201ENST00000385080 79 ntBASIC1.15□□□□□ -2.23
DDX56Q9NY93 RNA5SP237-201ENST00000410414 113 ntBASIC1.15□□□□□ -2.23
DDX56Q9NY93 MTND4LP9-201ENST00000427694 174 ntBASIC1.15□□□□□ -2.23
DDX56Q9NY93 AL137067.1-201ENST00000615933 120 ntBASIC1.15□□□□□ -2.23
DDX56Q9NY93 RNU6-746P-201ENST00000384112 109 ntBASIC1.14□□□□□ -2.23
DDX56Q9NY93 SNORA18-201ENST00000384416 132 ntBASIC1.14□□□□□ -2.23
DDX56Q9NY93 RNU6-257P-201ENST00000410238 98 ntBASIC1.14□□□□□ -2.23
DDX56Q9NY93 RNA5SP33-201ENST00000516687 98 ntBASIC1.14□□□□□ -2.23
DDX56Q9NY93 Y_RNA.703-201ENST00000516846 111 ntBASIC1.14□□□□□ -2.23
DDX56Q9NY93 AC004812.1-201ENST00000540773 146 ntBASIC1.14□□□□□ -2.23
DDX56Q9NY93 AC211469.2-201ENST00000605461 205 ntBASIC1.14□□□□□ -2.23
DDX56Q9NY93 U7.2-201ENST00000607576 63 ntBASIC1.14□□□□□ -2.23
DDX56Q9NY93 MIR6078-201ENST00000611069 100 ntBASIC1.14□□□□□ -2.23
DDX56Q9NY93 MIR30D-201ENST00000362283 70 ntBASIC1.13□□□□□ -2.23
DDX56Q9NY93 Y_RNA.531-201ENST00000384589 121 ntBASIC1.13□□□□□ -2.23
DDX56Q9NY93 MIR608-201ENST00000384820 100 ntBASIC1.13□□□□□ -2.23
DDX56Q9NY93 MT-TF-201ENST00000387314 71 ntBASIC1.13□□□□□ -2.23
DDX56Q9NY93 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.13□□□□□ -2.23
DDX56Q9NY93 RNU7-123P-201ENST00000515911 60 ntBASIC1.13□□□□□ -2.23
DDX56Q9NY93 RNU6-1053P-201ENST00000515930 101 ntBASIC1.13□□□□□ -2.23
DDX56Q9NY93 RNU6-977P-201ENST00000516411 103 ntBASIC1.13□□□□□ -2.23
DDX56Q9NY93 MIR4771-2-201ENST00000577758 74 ntBASIC1.13□□□□□ -2.23
DDX56Q9NY93 MIR4771-1-201ENST00000582617 74 ntBASIC1.13□□□□□ -2.23
DDX56Q9NY93 Y_RNA.298-201ENST00000364960 107 ntBASIC1.12□□□□□ -2.23
DDX56Q9NY93 RNU6-187P-201ENST00000384139 106 ntBASIC1.12□□□□□ -2.23
DDX56Q9NY93 SNORD105-201ENST00000386910 85 ntBASIC1.12□□□□□ -2.23
DDX56Q9NY93 SNORA40-201ENST00000388090 126 ntBASIC1.12□□□□□ -2.23
DDX56Q9NY93 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.12□□□□□ -2.23
DDX56Q9NY93 RPL39P25-201ENST00000449384 154 ntBASIC1.12□□□□□ -2.23
DDX56Q9NY93 IGKV1-22-201ENST00000524313 326 ntBASIC1.12□□□□□ -2.23
DDX56Q9NY93 AL662814.1-201ENST00000617364 121 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms