Protein–RNA interactions for Protein: Q9NQX3

GPHN, Gephyrin, humanhuman

Predicted RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPHNQ9NQX3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
GPHNQ9NQX3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
GPHNQ9NQX3 AC244023.1-201ENST00000426884 112 ntBASIC3.29□□□□□ -1.88
GPHNQ9NQX3 HSPE1P24-201ENST00000450782 238 ntBASIC3.29□□□□□ -1.88
GPHNQ9NQX3 SNORA31.15-201ENST00000516771 132 ntBASIC3.29□□□□□ -1.88
GPHNQ9NQX3 RNU6-1015P-201ENST00000517121 99 ntBASIC3.29□□□□□ -1.88
GPHNQ9NQX3 AL357312.1-201ENST00000603879 298 ntBASIC3.29□□□□□ -1.88
GPHNQ9NQX3 AC242498.1-201ENST00000604134 111 ntBASIC3.29□□□□□ -1.88
GPHNQ9NQX3 MIR1297-201ENST00000637311 77 ntBASIC3.29□□□□□ -1.88
GPHNQ9NQX3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
GPHNQ9NQX3 RNA5SP48-201ENST00000363969 126 ntBASIC3.28□□□□□ -1.88
GPHNQ9NQX3 Y_RNA.264-201ENST00000364665 102 ntBASIC3.28□□□□□ -1.88
GPHNQ9NQX3 Y_RNA.340-201ENST00000365330 92 ntBASIC3.28□□□□□ -1.88
GPHNQ9NQX3 RNA5SP292-201ENST00000390974 118 ntBASIC3.28□□□□□ -1.88
GPHNQ9NQX3 RNU6-243P-201ENST00000391140 107 ntBASIC3.28□□□□□ -1.88
GPHNQ9NQX3 RN7SL429P-201ENST00000479090 223 ntBASIC3.28□□□□□ -1.88
GPHNQ9NQX3 RN7SL489P-201ENST00000486185 223 ntBASIC3.28□□□□□ -1.88
GPHNQ9NQX3 RN7SL327P-201ENST00000488659 223 ntBASIC3.28□□□□□ -1.88
GPHNQ9NQX3 RNU6-70P-201ENST00000516438 60 ntBASIC3.28□□□□□ -1.88
GPHNQ9NQX3 RN7SL853P-201ENST00000617250 223 ntBASIC3.28□□□□□ -1.88
GPHNQ9NQX3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.28□□□□□ -1.88
GPHNQ9NQX3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
GPHNQ9NQX3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
GPHNQ9NQX3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
GPHNQ9NQX3 SNORD77.2-201ENST00000391045 68 ntBASIC3.27□□□□□ -1.89
GPHNQ9NQX3 UBBP3-201ENST00000445497 241 ntBASIC3.27□□□□□ -1.89
GPHNQ9NQX3 MIR4484-201ENST00000582855 83 ntBASIC3.27□□□□□ -1.89
GPHNQ9NQX3 SNORA4-201ENST00000584302 138 ntBASIC3.27□□□□□ -1.89
GPHNQ9NQX3 AL161722.3-201ENST00000605789 2983 ntBASIC3.27□□□□□ -1.89
GPHNQ9NQX3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.26□□□□□ -1.89
GPHNQ9NQX3 AC008163.1-202ENST00000636004 2889 ntBASIC3.26□□□□□ -1.89
GPHNQ9NQX3 RNA5SP126-201ENST00000365092 109 ntBASIC3.26□□□□□ -1.89
GPHNQ9NQX3 MIR653-201ENST00000385279 96 ntBASIC3.26□□□□□ -1.89
GPHNQ9NQX3 MIR548U-201ENST00000390728 81 ntBASIC3.26□□□□□ -1.89
GPHNQ9NQX3 RNU6-1254P-201ENST00000391266 104 ntBASIC3.26□□□□□ -1.89
GPHNQ9NQX3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC3.26□□□□□ -1.89
GPHNQ9NQX3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
GPHNQ9NQX3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
GPHNQ9NQX3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
GPHNQ9NQX3 SNORD56.5-201ENST00000364281 72 ntBASIC3.25□□□□□ -1.89
GPHNQ9NQX3 MIR635-201ENST00000384830 98 ntBASIC3.25□□□□□ -1.89
GPHNQ9NQX3 MIR196B-201ENST00000384852 84 ntBASIC3.25□□□□□ -1.89
GPHNQ9NQX3 RNA5SP100-201ENST00000410903 110 ntBASIC3.25□□□□□ -1.89
GPHNQ9NQX3 RNA5SP59-201ENST00000410922 110 ntBASIC3.25□□□□□ -1.89
GPHNQ9NQX3 5S_rRNA.3-201ENST00000517021 110 ntBASIC3.25□□□□□ -1.89
GPHNQ9NQX3 PRELID3BP2-201ENST00000605362 201 ntBASIC3.25□□□□□ -1.89
GPHNQ9NQX3 5S_rRNA.19-201ENST00000612131 110 ntBASIC3.25□□□□□ -1.89
GPHNQ9NQX3 5S_rRNA.18-201ENST00000621941 110 ntBASIC3.25□□□□□ -1.89
GPHNQ9NQX3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
GPHNQ9NQX3 AL138827.1-201ENST00000402666 306 ntBASIC3.24□□□□□ -1.89
GPHNQ9NQX3 RNA5SP385-201ENST00000515947 110 ntBASIC3.24□□□□□ -1.89
GPHNQ9NQX3 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.24□□□□□ -1.89
GPHNQ9NQX3 RNU6-56P-201ENST00000516986 93 ntBASIC3.24□□□□□ -1.89
GPHNQ9NQX3 AC104996.3-201ENST00000590718 94 ntBASIC3.24□□□□□ -1.89
GPHNQ9NQX3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
GPHNQ9NQX3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
GPHNQ9NQX3 AC062016.1-201ENST00000355719 319 ntBASIC3.23□□□□□ -1.89
GPHNQ9NQX3 SNORD36A-201ENST00000362874 73 ntBASIC3.23□□□□□ -1.89
GPHNQ9NQX3 MIR516A2-201ENST00000384888 90 ntBASIC3.23□□□□□ -1.89
GPHNQ9NQX3 MIR516A1-201ENST00000385033 90 ntBASIC3.23□□□□□ -1.89
GPHNQ9NQX3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
GPHNQ9NQX3 SNORA31.17-201ENST00000516953 127 ntBASIC3.23□□□□□ -1.89
GPHNQ9NQX3 MIR4435-1-201ENST00000582552 80 ntBASIC3.23□□□□□ -1.89
GPHNQ9NQX3 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.23□□□□□ -1.89
GPHNQ9NQX3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.23□□□□□ -1.89
GPHNQ9NQX3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
GPHNQ9NQX3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
GPHNQ9NQX3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.22□□□□□ -1.89
GPHNQ9NQX3 RNU6-396P-201ENST00000365369 105 ntBASIC3.22□□□□□ -1.89
GPHNQ9NQX3 RNU6-203P-201ENST00000384038 104 ntBASIC3.22□□□□□ -1.89
GPHNQ9NQX3 Y_RNA.491-201ENST00000384417 107 ntBASIC3.22□□□□□ -1.89
GPHNQ9NQX3 RNU6-466P-201ENST00000391224 103 ntBASIC3.22□□□□□ -1.89
GPHNQ9NQX3 RNA5SP270-201ENST00000411361 118 ntBASIC3.22□□□□□ -1.89
GPHNQ9NQX3 AC004965.1-201ENST00000413033 213 ntBASIC3.22□□□□□ -1.89
GPHNQ9NQX3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.22□□□□□ -1.89
GPHNQ9NQX3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.22□□□□□ -1.89
GPHNQ9NQX3 AC015818.7-201ENST00000428754 109 ntBASIC3.22□□□□□ -1.89
GPHNQ9NQX3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.22□□□□□ -1.89
GPHNQ9NQX3 AC005908.1-201ENST00000468701 347 ntBASIC3.22□□□□□ -1.89
GPHNQ9NQX3 SNORD111.1-201ENST00000516421 86 ntBASIC3.22□□□□□ -1.89
GPHNQ9NQX3 SNORD92-201ENST00000585078 85 ntBASIC3.22□□□□□ -1.89
GPHNQ9NQX3 Y_RNA.283-201ENST00000364798 112 ntBASIC3.21□□□□□ -1.9
GPHNQ9NQX3 AC108938.1-201ENST00000451204 136 ntBASIC3.21□□□□□ -1.9
GPHNQ9NQX3 SNORD109B-201ENST00000458961 67 ntBASIC3.21□□□□□ -1.9
GPHNQ9NQX3 SNORD109A-201ENST00000459128 67 ntBASIC3.21□□□□□ -1.9
GPHNQ9NQX3 RNU4ATAC9P-201ENST00000517146 126 ntBASIC3.21□□□□□ -1.9
GPHNQ9NQX3 AC121758.2-201ENST00000553271 193 ntBASIC3.21□□□□□ -1.9
GPHNQ9NQX3 MIR3064-201ENST00000581130 66 ntBASIC3.21□□□□□ -1.9
GPHNQ9NQX3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.21□□□□□ -1.9
GPHNQ9NQX3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
GPHNQ9NQX3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
GPHNQ9NQX3 RNU6-208P-201ENST00000362431 107 ntBASIC3.2□□□□□ -1.9
GPHNQ9NQX3 MIR563-201ENST00000385080 79 ntBASIC3.2□□□□□ -1.9
GPHNQ9NQX3 AC245517.4-201ENST00000448601 281 ntBASIC3.2□□□□□ -1.9
GPHNQ9NQX3 MIR4506-201ENST00000584693 77 ntBASIC3.2□□□□□ -1.9
GPHNQ9NQX3 AC067747.1-201ENST00000608026 250 ntBASIC3.2□□□□□ -1.9
GPHNQ9NQX3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
GPHNQ9NQX3 RNU6-634P-201ENST00000459134 106 ntBASIC3.19□□□□□ -1.9
GPHNQ9NQX3 SNORA31.26-201ENST00000517250 137 ntBASIC3.19□□□□□ -1.9
GPHNQ9NQX3 MIR4658-201ENST00000584344 65 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms