Protein–RNA interactions for Protein: Q9H3S1

SEMA4A, Semaphorin-4A, humanhuman

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4AQ9H3S1 AC099513.1-201ENST00000490423 301 ntBASIC2.1□□□□□ -2.07
SEMA4AQ9H3S1 RNU6-158P-201ENST00000517104 100 ntBASIC2.1□□□□□ -2.07
SEMA4AQ9H3S1 MIR548AE2-201ENST00000583456 67 ntBASIC2.1□□□□□ -2.07
SEMA4AQ9H3S1 uc_338.20-201ENST00000621563 178 ntBASIC2.1□□□□□ -2.07
SEMA4AQ9H3S1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.09□□□□□ -2.07
SEMA4AQ9H3S1 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
SEMA4AQ9H3S1 RNU6-661P-201ENST00000362409 107 ntBASIC2.09□□□□□ -2.07
SEMA4AQ9H3S1 RNU6-832P-201ENST00000363319 107 ntBASIC2.09□□□□□ -2.07
SEMA4AQ9H3S1 RNU6-409P-201ENST00000384114 104 ntBASIC2.09□□□□□ -2.07
SEMA4AQ9H3S1 RNU6-820P-201ENST00000384273 107 ntBASIC2.09□□□□□ -2.07
SEMA4AQ9H3S1 Y_RNA.467-201ENST00000384297 102 ntBASIC2.09□□□□□ -2.07
SEMA4AQ9H3S1 SNORA67.5-201ENST00000391036 107 ntBASIC2.09□□□□□ -2.07
SEMA4AQ9H3S1 SNORA40.18-201ENST00000391200 128 ntBASIC2.09□□□□□ -2.07
SEMA4AQ9H3S1 Y_RNA.601-201ENST00000410500 113 ntBASIC2.09□□□□□ -2.07
SEMA4AQ9H3S1 RNU7-113P-201ENST00000459273 62 ntBASIC2.09□□□□□ -2.07
SEMA4AQ9H3S1 AC022137.1-201ENST00000483735 151 ntBASIC2.09□□□□□ -2.07
SEMA4AQ9H3S1 RNU6-638P-201ENST00000516582 104 ntBASIC2.09□□□□□ -2.07
SEMA4AQ9H3S1 RNA5SP33-201ENST00000516687 98 ntBASIC2.09□□□□□ -2.07
SEMA4AQ9H3S1 RNU6-228P-201ENST00000362700 106 ntBASIC2.08□□□□□ -2.08
SEMA4AQ9H3S1 RNU6-363P-201ENST00000362895 105 ntBASIC2.08□□□□□ -2.08
SEMA4AQ9H3S1 RNU6-1124P-201ENST00000384169 107 ntBASIC2.08□□□□□ -2.08
SEMA4AQ9H3S1 RNU6-1152P-201ENST00000384576 107 ntBASIC2.08□□□□□ -2.08
SEMA4AQ9H3S1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
SEMA4AQ9H3S1 SNORD78.1-201ENST00000390866 65 ntBASIC2.08□□□□□ -2.08
SEMA4AQ9H3S1 SNORD28B-201ENST00000390993 75 ntBASIC2.08□□□□□ -2.08
SEMA4AQ9H3S1 AP1B1P2-201ENST00000416196 106 ntBASIC2.08□□□□□ -2.08
SEMA4AQ9H3S1 RNU7-67P-201ENST00000459003 62 ntBASIC2.08□□□□□ -2.08
SEMA4AQ9H3S1 RNU6-267P-201ENST00000516714 103 ntBASIC2.08□□□□□ -2.08
SEMA4AQ9H3S1 RNA5SP364-201ENST00000516938 78 ntBASIC2.08□□□□□ -2.08
SEMA4AQ9H3S1 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.08□□□□□ -2.08
SEMA4AQ9H3S1 MIR4791-201ENST00000607666 84 ntBASIC2.08□□□□□ -2.08
SEMA4AQ9H3S1 SNORD3E-202ENST00000627253 216 ntBASIC2.08□□□□□ -2.08
SEMA4AQ9H3S1 RNA5SP276-201ENST00000362580 94 ntBASIC2.07□□□□□ -2.08
SEMA4AQ9H3S1 RNY1P1-201ENST00000364372 112 ntBASIC2.07□□□□□ -2.08
SEMA4AQ9H3S1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SEMA4AQ9H3S1 SUMO2P12-201ENST00000405924 140 ntBASIC2.07□□□□□ -2.08
SEMA4AQ9H3S1 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.07□□□□□ -2.08
SEMA4AQ9H3S1 HMGN1P33-201ENST00000432945 451 ntBASIC2.07□□□□□ -2.08
SEMA4AQ9H3S1 RPL23AP6-201ENST00000446637 472 ntBASIC2.07□□□□□ -2.08
SEMA4AQ9H3S1 RNU7-96P-201ENST00000459535 64 ntBASIC2.07□□□□□ -2.08
SEMA4AQ9H3S1 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.07□□□□□ -2.08
SEMA4AQ9H3S1 MIR4713-201ENST00000582691 75 ntBASIC2.07□□□□□ -2.08
SEMA4AQ9H3S1 MIR4777-201ENST00000583710 86 ntBASIC2.07□□□□□ -2.08
SEMA4AQ9H3S1 FAM71BP1-201ENST00000604431 523 ntBASIC2.07□□□□□ -2.08
SEMA4AQ9H3S1 SNORD115-34-201ENST00000362441 82 ntBASIC2.06□□□□□ -2.08
SEMA4AQ9H3S1 SNORD115-12-201ENST00000362583 82 ntBASIC2.06□□□□□ -2.08
SEMA4AQ9H3S1 SNORD115-29-201ENST00000362834 82 ntBASIC2.06□□□□□ -2.08
SEMA4AQ9H3S1 SNORD115-9-201ENST00000362912 82 ntBASIC2.06□□□□□ -2.08
SEMA4AQ9H3S1 SNORD115-21-201ENST00000362963 81 ntBASIC2.06□□□□□ -2.08
SEMA4AQ9H3S1 SNORD115-14-201ENST00000363090 81 ntBASIC2.06□□□□□ -2.08
SEMA4AQ9H3S1 SNORD115-19-201ENST00000363098 82 ntBASIC2.06□□□□□ -2.08
SEMA4AQ9H3S1 SNORD115-18-201ENST00000363293 82 ntBASIC2.06□□□□□ -2.08
SEMA4AQ9H3S1 SNORD115-13-201ENST00000363358 82 ntBASIC2.06□□□□□ -2.08
SEMA4AQ9H3S1 SNORD115-41-201ENST00000363608 82 ntBASIC2.06□□□□□ -2.08
SEMA4AQ9H3S1 SNORD115-11-201ENST00000363616 82 ntBASIC2.06□□□□□ -2.08
SEMA4AQ9H3S1 SNORD115-5-201ENST00000363633 82 ntBASIC2.06□□□□□ -2.08
SEMA4AQ9H3S1 SNORD115-39-201ENST00000363694 82 ntBASIC2.06□□□□□ -2.08
SEMA4AQ9H3S1 SNORD115-4-201ENST00000363810 82 ntBASIC2.06□□□□□ -2.08
SEMA4AQ9H3S1 SNORD115-16-201ENST00000363887 82 ntBASIC2.06□□□□□ -2.08
SEMA4AQ9H3S1 SNORD115-6-201ENST00000363942 82 ntBASIC2.06□□□□□ -2.08
SEMA4AQ9H3S1 RNU6-457P-201ENST00000363999 107 ntBASIC2.06□□□□□ -2.08
SEMA4AQ9H3S1 SNORD115-42-201ENST00000364273 82 ntBASIC2.06□□□□□ -2.08
SEMA4AQ9H3S1 SNORD115-17-201ENST00000364612 82 ntBASIC2.06□□□□□ -2.08
SEMA4AQ9H3S1 SNORD115-15-201ENST00000364809 81 ntBASIC2.06□□□□□ -2.08
SEMA4AQ9H3S1 SNORD115-1-201ENST00000364961 82 ntBASIC2.06□□□□□ -2.08
SEMA4AQ9H3S1 SNORD115-26-201ENST00000365067 82 ntBASIC2.06□□□□□ -2.08
SEMA4AQ9H3S1 SNORD115-10-201ENST00000365073 81 ntBASIC2.06□□□□□ -2.08
SEMA4AQ9H3S1 SNORD115-43-201ENST00000365503 82 ntBASIC2.06□□□□□ -2.08
SEMA4AQ9H3S1 SNORD115-36-201ENST00000365629 82 ntBASIC2.06□□□□□ -2.08
SEMA4AQ9H3S1 MIR1255A-201ENST00000408338 113 ntBASIC2.06□□□□□ -2.08
SEMA4AQ9H3S1 RNU4-69P-201ENST00000410677 143 ntBASIC2.06□□□□□ -2.08
SEMA4AQ9H3S1 Y_RNA.659-201ENST00000515994 113 ntBASIC2.06□□□□□ -2.08
SEMA4AQ9H3S1 MIR4694-201ENST00000578534 80 ntBASIC2.06□□□□□ -2.08
SEMA4AQ9H3S1 MIR5089-201ENST00000580047 84 ntBASIC2.06□□□□□ -2.08
SEMA4AQ9H3S1 AC012493.3-201ENST00000604494 112 ntBASIC2.06□□□□□ -2.08
SEMA4AQ9H3S1 IGLL4P-201ENST00000614590 133 ntBASIC2.06□□□□□ -2.08
SEMA4AQ9H3S1 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.06□□□□□ -2.08
SEMA4AQ9H3S1 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SEMA4AQ9H3S1 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.05□□□□□ -2.08
SEMA4AQ9H3S1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
SEMA4AQ9H3S1 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.05□□□□□ -2.08
SEMA4AQ9H3S1 SNORA22.1-201ENST00000362701 134 ntBASIC2.05□□□□□ -2.08
SEMA4AQ9H3S1 RNU6-1125P-201ENST00000363601 107 ntBASIC2.05□□□□□ -2.08
SEMA4AQ9H3S1 RNA5SP190-201ENST00000365222 118 ntBASIC2.05□□□□□ -2.08
SEMA4AQ9H3S1 Y_RNA.370-201ENST00000365589 108 ntBASIC2.05□□□□□ -2.08
SEMA4AQ9H3S1 MIR136-201ENST00000385207 82 ntBASIC2.05□□□□□ -2.08
SEMA4AQ9H3S1 RNU6-913P-201ENST00000390913 95 ntBASIC2.05□□□□□ -2.08
SEMA4AQ9H3S1 MRPL35P3-201ENST00000421557 364 ntBASIC2.05□□□□□ -2.08
SEMA4AQ9H3S1 AC004941.2-201ENST00000427009 228 ntBASIC2.05□□□□□ -2.08
SEMA4AQ9H3S1 JTBP1-201ENST00000441314 247 ntBASIC2.05□□□□□ -2.08
SEMA4AQ9H3S1 AC109327.2-201ENST00000448339 378 ntBASIC2.05□□□□□ -2.08
SEMA4AQ9H3S1 RNU6-521P-201ENST00000516663 105 ntBASIC2.05□□□□□ -2.08
SEMA4AQ9H3S1 MIR548AR-201ENST00000582191 57 ntBASIC2.05□□□□□ -2.08
SEMA4AQ9H3S1 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SEMA4AQ9H3S1 Y_RNA.224-201ENST00000364308 111 ntBASIC2.04□□□□□ -2.08
SEMA4AQ9H3S1 Y_RNA.247-201ENST00000364500 92 ntBASIC2.04□□□□□ -2.08
SEMA4AQ9H3S1 RNU6-60P-201ENST00000364792 103 ntBASIC2.04□□□□□ -2.08
SEMA4AQ9H3S1 SNORA1.2-201ENST00000365189 134 ntBASIC2.04□□□□□ -2.08
SEMA4AQ9H3S1 MIR194-1-201ENST00000384892 85 ntBASIC2.04□□□□□ -2.08
SEMA4AQ9H3S1 RNU6-402P-201ENST00000410678 103 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 206.5 ms