Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 MIR526A1-201ENST00000384897 85 ntBASIC2.8□□□□□ -1.96
COL25A1Q9BXS0 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
COL25A1Q9BXS0 AC090897.1-201ENST00000580909 226 ntBASIC2.8□□□□□ -1.96
COL25A1Q9BXS0 AC067747.1-201ENST00000608026 250 ntBASIC2.8□□□□□ -1.96
COL25A1Q9BXS0 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
COL25A1Q9BXS0 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
COL25A1Q9BXS0 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
COL25A1Q9BXS0 MIR154-201ENST00000385243 84 ntBASIC2.79□□□□□ -1.96
COL25A1Q9BXS0 RNU6-850P-201ENST00000516934 103 ntBASIC2.79□□□□□ -1.96
COL25A1Q9BXS0 MIR3064-201ENST00000581130 66 ntBASIC2.79□□□□□ -1.96
COL25A1Q9BXS0 MIR4536-1-201ENST00000583537 88 ntBASIC2.79□□□□□ -1.96
COL25A1Q9BXS0 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.79□□□□□ -1.96
COL25A1Q9BXS0 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.79□□□□□ -1.96
COL25A1Q9BXS0 Y_RNA.178-201ENST00000363832 102 ntBASIC2.78□□□□□ -1.96
COL25A1Q9BXS0 RNU6-132P-201ENST00000383863 107 ntBASIC2.78□□□□□ -1.96
COL25A1Q9BXS0 RNU6-1237P-201ENST00000384777 107 ntBASIC2.78□□□□□ -1.96
COL25A1Q9BXS0 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.78□□□□□ -1.96
COL25A1Q9BXS0 RN7SL442P-201ENST00000473804 320 ntBASIC2.78□□□□□ -1.96
COL25A1Q9BXS0 AC023790.1-201ENST00000482174 347 ntBASIC2.78□□□□□ -1.96
COL25A1Q9BXS0 AC092185.1-201ENST00000491371 97 ntBASIC2.78□□□□□ -1.96
COL25A1Q9BXS0 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.78□□□□□ -1.96
COL25A1Q9BXS0 AC104996.3-201ENST00000590718 94 ntBASIC2.78□□□□□ -1.96
COL25A1Q9BXS0 AC069114.2-201ENST00000604699 304 ntBASIC2.78□□□□□ -1.96
COL25A1Q9BXS0 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.78□□□□□ -1.97
COL25A1Q9BXS0 SNORA72.6-201ENST00000384520 129 ntBASIC2.77□□□□□ -1.97
COL25A1Q9BXS0 RNU6-950P-201ENST00000384651 107 ntBASIC2.77□□□□□ -1.97
COL25A1Q9BXS0 RNU6-1031P-201ENST00000384773 107 ntBASIC2.77□□□□□ -1.97
COL25A1Q9BXS0 AC015818.7-201ENST00000428754 109 ntBASIC2.77□□□□□ -1.97
COL25A1Q9BXS0 HSPE1P24-201ENST00000450782 238 ntBASIC2.77□□□□□ -1.97
COL25A1Q9BXS0 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.77□□□□□ -1.97
COL25A1Q9BXS0 AC141846.1-201ENST00000568348 142 ntBASIC2.77□□□□□ -1.97
COL25A1Q9BXS0 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
COL25A1Q9BXS0 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.77□□□□□ -1.97
COL25A1Q9BXS0 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
COL25A1Q9BXS0 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.77□□□□□ -1.97
COL25A1Q9BXS0 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
COL25A1Q9BXS0 RNA5SP139-201ENST00000364340 117 ntBASIC2.76□□□□□ -1.97
COL25A1Q9BXS0 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
COL25A1Q9BXS0 RNU6-220P-201ENST00000390919 107 ntBASIC2.76□□□□□ -1.97
COL25A1Q9BXS0 RNU6-75P-201ENST00000515944 104 ntBASIC2.76□□□□□ -1.97
COL25A1Q9BXS0 RNA5SP320-201ENST00000516263 124 ntBASIC2.76□□□□□ -1.97
COL25A1Q9BXS0 RNU6-295P-201ENST00000516901 104 ntBASIC2.76□□□□□ -1.97
COL25A1Q9BXS0 CYP3A52P-201ENST00000563326 91 ntBASIC2.76□□□□□ -1.97
COL25A1Q9BXS0 AC005786.1-201ENST00000588553 154 ntBASIC2.76□□□□□ -1.97
COL25A1Q9BXS0 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
COL25A1Q9BXS0 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
COL25A1Q9BXS0 AP000648.3-201ENST00000623539 4507 ntBASIC2.75□□□□□ -1.97
COL25A1Q9BXS0 Y_RNA.12-201ENST00000362393 112 ntBASIC2.75□□□□□ -1.97
COL25A1Q9BXS0 RNA5SP383-201ENST00000362934 120 ntBASIC2.75□□□□□ -1.97
COL25A1Q9BXS0 SNORD114-26-201ENST00000363543 72 ntBASIC2.75□□□□□ -1.97
COL25A1Q9BXS0 RNU6-571P-201ENST00000384128 107 ntBASIC2.75□□□□□ -1.97
COL25A1Q9BXS0 Y_RNA.491-201ENST00000384417 107 ntBASIC2.75□□□□□ -1.97
COL25A1Q9BXS0 AC244636.1-201ENST00000421152 228 ntBASIC2.75□□□□□ -1.97
COL25A1Q9BXS0 RPS27P21-201ENST00000486977 252 ntBASIC2.75□□□□□ -1.97
COL25A1Q9BXS0 RNA5SP380-201ENST00000517190 98 ntBASIC2.75□□□□□ -1.97
COL25A1Q9BXS0 AC104027.1-201ENST00000521887 300 ntBASIC2.75□□□□□ -1.97
COL25A1Q9BXS0 YWHAEP2-201ENST00000580066 112 ntBASIC2.75□□□□□ -1.97
COL25A1Q9BXS0 YWHAEP3-201ENST00000582767 121 ntBASIC2.75□□□□□ -1.97
COL25A1Q9BXS0 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.75□□□□□ -1.97
COL25A1Q9BXS0 SNORA8.1-201ENST00000384250 140 ntBASIC2.74□□□□□ -1.97
COL25A1Q9BXS0 RNU6-205P-201ENST00000390858 107 ntBASIC2.74□□□□□ -1.97
COL25A1Q9BXS0 TRMT112P2-201ENST00000512910 132 ntBASIC2.74□□□□□ -1.97
COL25A1Q9BXS0 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.74□□□□□ -1.97
COL25A1Q9BXS0 SNORA74.3-201ENST00000517108 154 ntBASIC2.74□□□□□ -1.97
COL25A1Q9BXS0 MIR4500-201ENST00000579472 76 ntBASIC2.74□□□□□ -1.97
COL25A1Q9BXS0 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
COL25A1Q9BXS0 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
COL25A1Q9BXS0 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
COL25A1Q9BXS0 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
COL25A1Q9BXS0 Y_RNA.36-201ENST00000362602 112 ntBASIC2.73□□□□□ -1.97
COL25A1Q9BXS0 SNORD36A-201ENST00000362874 73 ntBASIC2.73□□□□□ -1.97
COL25A1Q9BXS0 SNORD90-201ENST00000391145 111 ntBASIC2.73□□□□□ -1.97
COL25A1Q9BXS0 SNORA26.9-201ENST00000391322 122 ntBASIC2.73□□□□□ -1.97
COL25A1Q9BXS0 AC138749.4-201ENST00000563970 127 ntBASIC2.73□□□□□ -1.97
COL25A1Q9BXS0 AL357312.1-201ENST00000603879 298 ntBASIC2.73□□□□□ -1.97
COL25A1Q9BXS0 U4.3-201ENST00000621047 82 ntBASIC2.73□□□□□ -1.97
COL25A1Q9BXS0 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
COL25A1Q9BXS0 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
COL25A1Q9BXS0 MIR378A-201ENST00000362177 66 ntBASIC2.72□□□□□ -1.97
COL25A1Q9BXS0 RNU6-330P-201ENST00000363015 107 ntBASIC2.72□□□□□ -1.97
COL25A1Q9BXS0 Y_RNA.283-201ENST00000364798 112 ntBASIC2.72□□□□□ -1.97
COL25A1Q9BXS0 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
COL25A1Q9BXS0 MIR548U-201ENST00000390728 81 ntBASIC2.72□□□□□ -1.97
COL25A1Q9BXS0 MIR942-201ENST00000401111 86 ntBASIC2.72□□□□□ -1.97
COL25A1Q9BXS0 SCARNA16.3-201ENST00000516595 184 ntBASIC2.72□□□□□ -1.97
COL25A1Q9BXS0 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.72□□□□□ -1.97
COL25A1Q9BXS0 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.72□□□□□ -1.97
COL25A1Q9BXS0 RNU6-949P-201ENST00000384040 107 ntBASIC2.71□□□□□ -1.98
COL25A1Q9BXS0 RNU6-630P-201ENST00000391258 106 ntBASIC2.71□□□□□ -1.98
COL25A1Q9BXS0 RNA5SP237-201ENST00000410414 113 ntBASIC2.71□□□□□ -1.98
COL25A1Q9BXS0 AC027119.1-201ENST00000440877 241 ntBASIC2.71□□□□□ -1.98
COL25A1Q9BXS0 MIR5094-201ENST00000578766 85 ntBASIC2.71□□□□□ -1.98
COL25A1Q9BXS0 AL359821.1-201ENST00000605519 182 ntBASIC2.71□□□□□ -1.98
COL25A1Q9BXS0 AL662814.1-201ENST00000617364 121 ntBASIC2.71□□□□□ -1.98
COL25A1Q9BXS0 AC008133.2-201ENST00000624540 351 ntBASIC2.71□□□□□ -1.98
COL25A1Q9BXS0 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.71□□□□□ -1.98
COL25A1Q9BXS0 RNU1-91P-201ENST00000364746 163 ntBASIC2.7□□□□□ -1.98
COL25A1Q9BXS0 SNORD38B-201ENST00000384690 67 ntBASIC2.7□□□□□ -1.98
COL25A1Q9BXS0 MIR660-201ENST00000385235 97 ntBASIC2.7□□□□□ -1.98
COL25A1Q9BXS0 BX276092.1-201ENST00000427368 251 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms