Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.25□□□□□ -1.89
MS4A3Q96HJ5 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
MS4A3Q96HJ5 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
MS4A3Q96HJ5 MIR1257-201ENST00000408490 117 ntBASIC3.24□□□□□ -1.89
MS4A3Q96HJ5 RNU6ATAC-201ENST00000408749 126 ntBASIC3.24□□□□□ -1.89
MS4A3Q96HJ5 RNU7-185P-201ENST00000459215 60 ntBASIC3.24□□□□□ -1.89
MS4A3Q96HJ5 U6.98-201ENST00000637157 84 ntBASIC3.24□□□□□ -1.89
MS4A3Q96HJ5 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
MS4A3Q96HJ5 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
MS4A3Q96HJ5 RNA5SP424-201ENST00000390988 115 ntBASIC3.23□□□□□ -1.89
MS4A3Q96HJ5 MIR5187-201ENST00000583479 76 ntBASIC3.23□□□□□ -1.89
MS4A3Q96HJ5 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
MS4A3Q96HJ5 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.23□□□□□ -1.89
MS4A3Q96HJ5 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
MS4A3Q96HJ5 RNU1-51P-201ENST00000365345 176 ntBASIC3.22□□□□□ -1.89
MS4A3Q96HJ5 RNU6-656P-201ENST00000516785 107 ntBASIC3.22□□□□□ -1.89
MS4A3Q96HJ5 RNU6-980P-201ENST00000516925 103 ntBASIC3.22□□□□□ -1.89
MS4A3Q96HJ5 U1.36-201ENST00000620684 176 ntBASIC3.22□□□□□ -1.89
MS4A3Q96HJ5 MIR7153-201ENST00000637758 57 ntBASIC3.22□□□□□ -1.89
MS4A3Q96HJ5 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
MS4A3Q96HJ5 MIR30E-201ENST00000362104 92 ntBASIC3.21□□□□□ -1.9
MS4A3Q96HJ5 SNORD9-201ENST00000362566 104 ntBASIC3.21□□□□□ -1.9
MS4A3Q96HJ5 RPL23AP83-201ENST00000434984 473 ntBASIC3.21□□□□□ -1.9
MS4A3Q96HJ5 MIR548V-201ENST00000584165 80 ntBASIC3.21□□□□□ -1.9
MS4A3Q96HJ5 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
MS4A3Q96HJ5 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.2□□□□□ -1.9
MS4A3Q96HJ5 RNU6-35P-201ENST00000384530 107 ntBASIC3.2□□□□□ -1.9
MS4A3Q96HJ5 RNU6-930P-201ENST00000390938 100 ntBASIC3.2□□□□□ -1.9
MS4A3Q96HJ5 RNA5SP100-201ENST00000410903 110 ntBASIC3.2□□□□□ -1.9
MS4A3Q96HJ5 RNA5SP59-201ENST00000410922 110 ntBASIC3.2□□□□□ -1.9
MS4A3Q96HJ5 AL035423.1-201ENST00000420331 213 ntBASIC3.2□□□□□ -1.9
MS4A3Q96HJ5 SNORA84-201ENST00000459229 133 ntBASIC3.2□□□□□ -1.9
MS4A3Q96HJ5 RNU6-922P-201ENST00000516753 99 ntBASIC3.2□□□□□ -1.9
MS4A3Q96HJ5 5S_rRNA.3-201ENST00000517021 110 ntBASIC3.2□□□□□ -1.9
MS4A3Q96HJ5 AP003716.2-201ENST00000528260 108 ntBASIC3.2□□□□□ -1.9
MS4A3Q96HJ5 5S_rRNA.19-201ENST00000612131 110 ntBASIC3.2□□□□□ -1.9
MS4A3Q96HJ5 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC3.2□□□□□ -1.9
MS4A3Q96HJ5 5S_rRNA.18-201ENST00000621941 110 ntBASIC3.2□□□□□ -1.9
MS4A3Q96HJ5 AP000553.6-201ENST00000641242 118 ntBASIC3.2□□□□□ -1.9
MS4A3Q96HJ5 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.2□□□□□ -1.9
MS4A3Q96HJ5 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
MS4A3Q96HJ5 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.2□□□□□ -1.9
MS4A3Q96HJ5 MAPK10-266ENST00000641066 6555 ntBASIC3.2□□□□□ -1.9
MS4A3Q96HJ5 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.2□□□□□ -1.9
MS4A3Q96HJ5 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
MS4A3Q96HJ5 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
MS4A3Q96HJ5 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
MS4A3Q96HJ5 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
MS4A3Q96HJ5 SNORA2.1-201ENST00000363089 137 ntBASIC3.19□□□□□ -1.9
MS4A3Q96HJ5 SNORA62.3-201ENST00000365110 153 ntBASIC3.19□□□□□ -1.9
MS4A3Q96HJ5 RNA5SP259-201ENST00000365541 109 ntBASIC3.19□□□□□ -1.9
MS4A3Q96HJ5 RNU6-260P-201ENST00000384092 107 ntBASIC3.19□□□□□ -1.9
MS4A3Q96HJ5 MIR1254-2-201ENST00000579553 63 ntBASIC3.19□□□□□ -1.9
MS4A3Q96HJ5 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.19□□□□□ -1.9
MS4A3Q96HJ5 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
MS4A3Q96HJ5 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
MS4A3Q96HJ5 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
MS4A3Q96HJ5 AL359837.1-201ENST00000381357 287 ntBASIC3.18□□□□□ -1.9
MS4A3Q96HJ5 SNORA5A-201ENST00000384111 134 ntBASIC3.18□□□□□ -1.9
MS4A3Q96HJ5 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
MS4A3Q96HJ5 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.18□□□□□ -1.9
MS4A3Q96HJ5 RN7SL442P-201ENST00000473804 320 ntBASIC3.18□□□□□ -1.9
MS4A3Q96HJ5 RNU1-95P-201ENST00000516357 160 ntBASIC3.18□□□□□ -1.9
MS4A3Q96HJ5 RNU1-128P-201ENST00000516704 160 ntBASIC3.18□□□□□ -1.9
MS4A3Q96HJ5 SNORA31.17-201ENST00000516953 127 ntBASIC3.18□□□□□ -1.9
MS4A3Q96HJ5 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
MS4A3Q96HJ5 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
MS4A3Q96HJ5 SNORA73.2-201ENST00000364946 201 ntBASIC3.17□□□□□ -1.9
MS4A3Q96HJ5 MIR183-201ENST00000384958 110 ntBASIC3.17□□□□□ -1.9
MS4A3Q96HJ5 MIR513A1-201ENST00000385138 129 ntBASIC3.17□□□□□ -1.9
MS4A3Q96HJ5 MIR3158-1-201ENST00000583596 81 ntBASIC3.17□□□□□ -1.9
MS4A3Q96HJ5 XIST_intron.1-201ENST00000619444 68 ntBASIC3.17□□□□□ -1.9
MS4A3Q96HJ5 AC034229.5-201ENST00000624258 185 ntBASIC3.17□□□□□ -1.9
MS4A3Q96HJ5 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.17□□□□□ -1.9
MS4A3Q96HJ5 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
MS4A3Q96HJ5 MIR1185-1-201ENST00000408598 86 ntBASIC3.16□□□□□ -1.9
MS4A3Q96HJ5 RNA5SP95-201ENST00000410319 137 ntBASIC3.16□□□□□ -1.9
MS4A3Q96HJ5 snoU13.25-201ENST00000458945 104 ntBASIC3.16□□□□□ -1.9
MS4A3Q96HJ5 SNORA67.7-201ENST00000516664 135 ntBASIC3.16□□□□□ -1.9
MS4A3Q96HJ5 MIR6739-201ENST00000622461 75 ntBASIC3.16□□□□□ -1.9
MS4A3Q96HJ5 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.16□□□□□ -1.9
MS4A3Q96HJ5 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
MS4A3Q96HJ5 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
MS4A3Q96HJ5 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
MS4A3Q96HJ5 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.15□□□□□ -1.9
MS4A3Q96HJ5 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
MS4A3Q96HJ5 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
MS4A3Q96HJ5 MIR627-201ENST00000384979 97 ntBASIC3.15□□□□□ -1.91
MS4A3Q96HJ5 SNORA11-201ENST00000408789 128 ntBASIC3.15□□□□□ -1.91
MS4A3Q96HJ5 UBBP3-201ENST00000445497 241 ntBASIC3.15□□□□□ -1.91
MS4A3Q96HJ5 AC244505.6-201ENST00000452829 130 ntBASIC3.15□□□□□ -1.91
MS4A3Q96HJ5 SNORA70.18-201ENST00000516696 98 ntBASIC3.15□□□□□ -1.91
MS4A3Q96HJ5 MIR8058-201ENST00000615737 89 ntBASIC3.15□□□□□ -1.91
MS4A3Q96HJ5 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
MS4A3Q96HJ5 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
MS4A3Q96HJ5 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
MS4A3Q96HJ5 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.14□□□□□ -1.91
MS4A3Q96HJ5 AC093908.1-201ENST00000623125 8092 ntBASIC3.14□□□□□ -1.91
MS4A3Q96HJ5 RNA5SP42-201ENST00000364278 115 ntBASIC3.14□□□□□ -1.91
MS4A3Q96HJ5 RNU7-13P-201ENST00000516413 62 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms