| FOXJ1 | Q92949 | CHD9-202 | ENST00000398510 | 11337 nt | TSL 1 (best) BASIC | 2.75 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | Y_RNA.57-201 | ENST00000362806 | 113 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | RNU4-32P-201 | ENST00000363404 | 141 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | RNU1-112P-201 | ENST00000364401 | 164 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | AC003982.1-202 | ENST00000469928 | 248 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | SNORA31.15-201 | ENST00000516771 | 132 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | AC090897.1-201 | ENST00000580909 | 226 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | ATP11C-202 | ENST00000361648 | 6010 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.75 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | AL161431.1-201 | ENST00000618966 | 4205 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | RNA5SP68-201 | ENST00000363885 | 119 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | SNORD56.5-201 | ENST00000364281 | 72 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | RNU6-571P-201 | ENST00000384128 | 107 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | RNU6-380P-201 | ENST00000410207 | 107 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | AL731684.2-201 | ENST00000426839 | 333 nt | TSL 5 BASIC | 2.74 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | LINC00393-201 | ENST00000443621 | 282 nt | TSL 3 BASIC | 2.74 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | snoU13.2-201 | ENST00000459201 | 104 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | snoU13.11-201 | ENST00000459219 | 104 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | Y_RNA.648-201 | ENST00000459455 | 110 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | RNU7-41P-201 | ENST00000515917 | 61 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | TRAJ36-201 | ENST00000614481 | 58 nt | APPRIS P1 BASIC | 2.74 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | MIR6715A-201 | ENST00000615929 | 79 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | ST7-AS2_1.1-201 | ENST00000622900 | 72 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | CENPE-201 | ENST00000265148 | 8612 nt | APPRIS P1 TSL 2 BASIC | 2.73 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | MIR26A1-201 | ENST00000362205 | 77 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | VTRNA1-1-201 | ENST00000363120 | 99 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | RNA5SP48-201 | ENST00000363969 | 126 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | AC009474.2-201 | ENST00000451383 | 136 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | RPS27P21-201 | ENST00000486977 | 252 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | MIR6817-201 | ENST00000615588 | 66 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | Metazoa_SRP.32-201 | ENST00000622685 | 286 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | BRDT-206 | ENST00000402388 | 3125 nt | APPRIS P3 TSL 1 (best) BASIC | 2.73 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | LIG4-203 | ENST00000442234 | 3982 nt | APPRIS P1 TSL 1 (best) BASIC | 2.72 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | FAR1-204 | ENST00000532502 | 5820 nt | TSL 2 BASIC | 2.72 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | SENP7-205 | ENST00000394091 | 4434 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.72 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | RNF219-AS1-214 | ENST00000607862 | 6001 nt | TSL 1 (best) BASIC | 2.72 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | RNU4-83P-201 | ENST00000410863 | 133 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | AL450471.1-201 | ENST00000447509 | 127 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | RNU7-85P-201 | ENST00000458851 | 63 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | RNU6-850P-201 | ENST00000516934 | 103 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | AC138749.4-201 | ENST00000563970 | 127 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | MIR4500-201 | ENST00000579472 | 76 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | GS1-279B7.1-204 | ENST00000641809 | 378 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | CCPG1-203 | ENST00000442196 | 3453 nt | APPRIS P1 TSL 2 BASIC | 2.72 | □□□□□ -1.97 | | |
| FOXJ1 | Q92949 | SLC6A15-202 | ENST00000309283 | 3108 nt | TSL 5 BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | Y_RNA.508-201 | ENST00000384502 | 114 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | MIR194-1-201 | ENST00000384892 | 85 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | RNA5SP270-201 | ENST00000411361 | 118 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | AC244023.1-201 | ENST00000426884 | 112 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | AC114801.3-201 | ENST00000510231 | 177 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | SNORA31.17-201 | ENST00000516953 | 127 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | DEFB122-202 | ENST00000569013 | 197 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | AC242498.1-201 | ENST00000604134 | 111 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | MYSM1-208 | ENST00000622766 | 6020 nt | TSL 1 (best) BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | SIRT1-203 | ENST00000406900 | 3295 nt | TSL 2 BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | RNU6-590P-201 | ENST00000365039 | 107 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | RNU6-203P-201 | ENST00000384038 | 104 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | SNORA70B-201 | ENST00000384210 | 135 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | RNU6ATAC42P-201 | ENST00000408637 | 95 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | MIR1261-201 | ENST00000408659 | 82 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | AC004965.1-201 | ENST00000413033 | 213 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | Y_RNA.660-201 | ENST00000516002 | 120 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | MIR4658-201 | ENST00000584344 | 65 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | NEDD4-205 | ENST00000506154 | 6751 nt | TSL 1 (best) BASIC | 2.69 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | MIRLET7A1-201 | ENST00000362295 | 80 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | RNU6-686P-201 | ENST00000364839 | 107 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | MIR563-201 | ENST00000385080 | 79 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | SNORA40.18-201 | ENST00000391200 | 128 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | RNA5SP148-201 | ENST00000516527 | 94 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | MIR4796-201 | ENST00000580742 | 81 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | MACC1-202 | ENST00000400331 | 9159 nt | APPRIS P1 TSL 2 BASIC | 2.68 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | SNORA63.2-201 | ENST00000362603 | 126 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | Z98742.3-201 | ENST00000418637 | 326 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | AC004223.1-201 | ENST00000479840 | 271 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | AC008413.1-201 | ENST00000511864 | 177 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | PRELID3BP2-201 | ENST00000605362 | 201 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | MIR588-201 | ENST00000384900 | 83 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | TRAJ1-201 | ENST00000390536 | 62 nt | APPRIS P1 BASIC | 2.67 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | RNA5SP450-201 | ENST00000411206 | 102 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | FGF7P7-201 | ENST00000514120 | 227 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | RNA5SP445-201 | ENST00000515889 | 115 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | RNU6-523P-201 | ENST00000516304 | 54 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | SNORA9.3-201 | ENST00000516383 | 129 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | SNORD111.1-201 | ENST00000516421 | 86 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | MIR3605-201 | ENST00000583214 | 100 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | SNORA4-201 | ENST00000584302 | 138 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | FO624990.1-201 | ENST00000636373 | 85 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | AC008163.1-202 | ENST00000636004 | 2889 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | DNAH7-201 | ENST00000312428 | 12394 nt | APPRIS P1 TSL 1 (best) BASIC | 2.67 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | SNORA72.6-201 | ENST00000384520 | 129 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | RNU4ATAC16P-201 | ENST00000408512 | 126 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | RNA5SP282-201 | ENST00000516355 | 108 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | RNA5SP24-201 | ENST00000516478 | 95 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | AC121758.2-201 | ENST00000553271 | 193 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | SNORD53-201 | ENST00000579969 | 78 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | AL357312.1-201 | ENST00000603879 | 298 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | U6.109-201 | ENST00000636749 | 87 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | TXLNGY-201 | ENST00000253320 | 7299 nt | TSL 2 BASIC | 2.65 | □□□□□ -1.98 | | |
| FOXJ1 | Q92949 | Y_RNA.119-201 | ENST00000363301 | 96 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| FOXJ1 | Q92949 | SNORA25.9-201 | ENST00000365087 | 128 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| FOXJ1 | Q92949 | SUMO1P4-201 | ENST00000429430 | 302 nt | BASIC | 2.65 | □□□□□ -1.99 | | |