Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 SUMO1P4-201ENST00000429430 302 ntBASIC2.77□□□□□ -1.97
NEDD1Q8NHV4 AC023141.11-201ENST00000508864 202 ntBASIC2.77□□□□□ -1.97
NEDD1Q8NHV4 FGF7P7-201ENST00000514120 227 ntBASIC2.77□□□□□ -1.97
NEDD1Q8NHV4 Y_RNA.660-201ENST00000516002 120 ntBASIC2.77□□□□□ -1.97
NEDD1Q8NHV4 MIR5007-201ENST00000583098 95 ntBASIC2.77□□□□□ -1.97
NEDD1Q8NHV4 AL512598.1-201ENST00000610158 273 ntBASIC2.77□□□□□ -1.97
NEDD1Q8NHV4 MIR8066-201ENST00000617280 78 ntBASIC2.77□□□□□ -1.97
NEDD1Q8NHV4 Z97988.1-201ENST00000637697 135 ntBASIC2.77□□□□□ -1.97
NEDD1Q8NHV4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
NEDD1Q8NHV4 MIR21-201ENST00000362134 72 ntBASIC2.76□□□□□ -1.97
NEDD1Q8NHV4 RNU5F-1-201ENST00000362507 117 ntBASIC2.76□□□□□ -1.97
NEDD1Q8NHV4 Y_RNA.537-201ENST00000384626 109 ntBASIC2.76□□□□□ -1.97
NEDD1Q8NHV4 MIR452-201ENST00000385020 85 ntBASIC2.76□□□□□ -1.97
NEDD1Q8NHV4 Y_RNA.681-201ENST00000516445 113 ntBASIC2.76□□□□□ -1.97
NEDD1Q8NHV4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.76□□□□□ -1.97
NEDD1Q8NHV4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
NEDD1Q8NHV4 ZNF658B-202ENST00000615961 3375 ntBASIC2.75□□□□□ -1.97
NEDD1Q8NHV4 SNORD114-30-201ENST00000364448 72 ntBASIC2.75□□□□□ -1.97
NEDD1Q8NHV4 SNORD115-31-201ENST00000365318 82 ntBASIC2.75□□□□□ -1.97
NEDD1Q8NHV4 SNORD30.1-201ENST00000391309 70 ntBASIC2.75□□□□□ -1.97
NEDD1Q8NHV4 AC003685.2-201ENST00000422795 395 ntBASIC2.75□□□□□ -1.97
NEDD1Q8NHV4 AC074348.1-201ENST00000426503 132 ntBASIC2.75□□□□□ -1.97
NEDD1Q8NHV4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.75□□□□□ -1.97
NEDD1Q8NHV4 RNU1-41P-201ENST00000516161 162 ntBASIC2.75□□□□□ -1.97
NEDD1Q8NHV4 RNU1-48P-201ENST00000516400 162 ntBASIC2.75□□□□□ -1.97
NEDD1Q8NHV4 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.75□□□□□ -1.97
NEDD1Q8NHV4 RNU6-220P-201ENST00000390919 107 ntBASIC2.74□□□□□ -1.97
NEDD1Q8NHV4 snoU13.16-201ENST00000459350 104 ntBASIC2.74□□□□□ -1.97
NEDD1Q8NHV4 Y_RNA.648-201ENST00000459455 110 ntBASIC2.74□□□□□ -1.97
NEDD1Q8NHV4 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
NEDD1Q8NHV4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.74□□□□□ -1.97
NEDD1Q8NHV4 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.73□□□□□ -1.97
NEDD1Q8NHV4 SNORA38-201ENST00000363946 132 ntBASIC2.73□□□□□ -1.97
NEDD1Q8NHV4 SNRPGP12-201ENST00000449481 213 ntBASIC2.73□□□□□ -1.97
NEDD1Q8NHV4 SNORA18.5-201ENST00000516616 101 ntBASIC2.73□□□□□ -1.97
NEDD1Q8NHV4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
NEDD1Q8NHV4 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NEDD1Q8NHV4 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NEDD1Q8NHV4 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.72□□□□□ -1.97
NEDD1Q8NHV4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
NEDD1Q8NHV4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
NEDD1Q8NHV4 RNU6-132P-201ENST00000383863 107 ntBASIC2.72□□□□□ -1.97
NEDD1Q8NHV4 MIR9-2-201ENST00000384838 87 ntBASIC2.72□□□□□ -1.97
NEDD1Q8NHV4 SNORD90-201ENST00000391145 111 ntBASIC2.72□□□□□ -1.97
NEDD1Q8NHV4 AL034345.1-201ENST00000407768 123 ntBASIC2.72□□□□□ -1.97
NEDD1Q8NHV4 Y_RNA.596-201ENST00000410462 109 ntBASIC2.72□□□□□ -1.97
NEDD1Q8NHV4 RPS29P11-201ENST00000496507 171 ntBASIC2.72□□□□□ -1.97
NEDD1Q8NHV4 RNU6-807P-201ENST00000516805 107 ntBASIC2.72□□□□□ -1.97
NEDD1Q8NHV4 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.72□□□□□ -1.97
NEDD1Q8NHV4 AC090897.1-201ENST00000580909 226 ntBASIC2.72□□□□□ -1.97
NEDD1Q8NHV4 SNORD14A-201ENST00000606526 91 ntBASIC2.72□□□□□ -1.97
NEDD1Q8NHV4 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.72□□□□□ -1.97
NEDD1Q8NHV4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.72□□□□□ -1.97
NEDD1Q8NHV4 MIR1297-201ENST00000637311 77 ntBASIC2.72□□□□□ -1.97
NEDD1Q8NHV4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NEDD1Q8NHV4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NEDD1Q8NHV4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.72□□□□□ -1.97
NEDD1Q8NHV4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
NEDD1Q8NHV4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.71□□□□□ -1.98
NEDD1Q8NHV4 RNU6-461P-201ENST00000364195 107 ntBASIC2.71□□□□□ -1.98
NEDD1Q8NHV4 SNORA25.9-201ENST00000365087 128 ntBASIC2.71□□□□□ -1.98
NEDD1Q8NHV4 RNU6-1241P-201ENST00000384536 107 ntBASIC2.71□□□□□ -1.98
NEDD1Q8NHV4 RNU6-1237P-201ENST00000384777 107 ntBASIC2.71□□□□□ -1.98
NEDD1Q8NHV4 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.71□□□□□ -1.98
NEDD1Q8NHV4 RNU6-75P-201ENST00000515944 104 ntBASIC2.71□□□□□ -1.98
NEDD1Q8NHV4 RNU6-23P-201ENST00000363283 107 ntBASIC2.7□□□□□ -1.98
NEDD1Q8NHV4 RNU6-1019P-201ENST00000364424 107 ntBASIC2.7□□□□□ -1.98
NEDD1Q8NHV4 Y_RNA.354-201ENST00000365448 111 ntBASIC2.7□□□□□ -1.98
NEDD1Q8NHV4 RNU6-811P-201ENST00000384069 107 ntBASIC2.7□□□□□ -1.98
NEDD1Q8NHV4 SNORA70B-201ENST00000384210 135 ntBASIC2.7□□□□□ -1.98
NEDD1Q8NHV4 RNU6-296P-201ENST00000384608 107 ntBASIC2.7□□□□□ -1.98
NEDD1Q8NHV4 RNU6-1031P-201ENST00000384773 107 ntBASIC2.7□□□□□ -1.98
NEDD1Q8NHV4 SNORD77.2-201ENST00000391045 68 ntBASIC2.7□□□□□ -1.98
NEDD1Q8NHV4 AL356320.1-201ENST00000429616 163 ntBASIC2.7□□□□□ -1.98
NEDD1Q8NHV4 RNU6-850P-201ENST00000516934 103 ntBASIC2.7□□□□□ -1.98
NEDD1Q8NHV4 RNU7-156P-201ENST00000517214 74 ntBASIC2.7□□□□□ -1.98
NEDD1Q8NHV4 AC005520.4-201ENST00000604337 90 ntBASIC2.7□□□□□ -1.98
NEDD1Q8NHV4 Z82195.2-201ENST00000612348 18351 ntBASIC2.7□□□□□ -1.98
NEDD1Q8NHV4 RNY1P2-201ENST00000364820 117 ntBASIC2.69□□□□□ -1.98
NEDD1Q8NHV4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
NEDD1Q8NHV4 SNORA11.4-201ENST00000408823 129 ntBASIC2.69□□□□□ -1.98
NEDD1Q8NHV4 RNA5SP425-201ENST00000410336 112 ntBASIC2.69□□□□□ -1.98
NEDD1Q8NHV4 RN7SKP223-201ENST00000410582 62 ntBASIC2.69□□□□□ -1.98
NEDD1Q8NHV4 SCARNA16.3-201ENST00000516595 184 ntBASIC2.69□□□□□ -1.98
NEDD1Q8NHV4 RNU6-303P-201ENST00000517091 106 ntBASIC2.69□□□□□ -1.98
NEDD1Q8NHV4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.69□□□□□ -1.98
NEDD1Q8NHV4 FO624990.1-201ENST00000636373 85 ntBASIC2.69□□□□□ -1.98
NEDD1Q8NHV4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
NEDD1Q8NHV4 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NEDD1Q8NHV4 AC019129.1-201ENST00000403786 261 ntBASIC2.68□□□□□ -1.98
NEDD1Q8NHV4 AC141846.1-201ENST00000568348 142 ntBASIC2.68□□□□□ -1.98
NEDD1Q8NHV4 MIR3064-201ENST00000581130 66 ntBASIC2.68□□□□□ -1.98
NEDD1Q8NHV4 MIR6766-201ENST00000622641 72 ntBASIC2.68□□□□□ -1.98
NEDD1Q8NHV4 RNA5SP432-201ENST00000362480 116 ntBASIC2.67□□□□□ -1.98
NEDD1Q8NHV4 RNU6-499P-201ENST00000365615 107 ntBASIC2.67□□□□□ -1.98
NEDD1Q8NHV4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
NEDD1Q8NHV4 RNU6-663P-201ENST00000391105 106 ntBASIC2.67□□□□□ -1.98
NEDD1Q8NHV4 MIR1273D-201ENST00000577266 86 ntBASIC2.67□□□□□ -1.98
NEDD1Q8NHV4 MIR4446-201ENST00000578505 67 ntBASIC2.67□□□□□ -1.98
NEDD1Q8NHV4 AP000753.3-201ENST00000604083 169 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 186 ms