Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 RNU1-52P-201ENST00000384190 164 ntBASIC2.66□□□□□ -1.98
CCDC116Q8IYX3 RNU6-360P-201ENST00000390944 104 ntBASIC2.66□□□□□ -1.98
CCDC116Q8IYX3 AC244023.1-201ENST00000426884 112 ntBASIC2.66□□□□□ -1.98
CCDC116Q8IYX3 snoU13.2-201ENST00000459201 104 ntBASIC2.66□□□□□ -1.98
CCDC116Q8IYX3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC116Q8IYX3 AC242498.1-201ENST00000604134 111 ntBASIC2.66□□□□□ -1.98
CCDC116Q8IYX3 U6.109-201ENST00000636749 87 ntBASIC2.66□□□□□ -1.98
CCDC116Q8IYX3 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC116Q8IYX3 SNORA63.2-201ENST00000362603 126 ntBASIC2.65□□□□□ -1.99
CCDC116Q8IYX3 RNU6-686P-201ENST00000364839 107 ntBASIC2.65□□□□□ -1.99
CCDC116Q8IYX3 RNU6-590P-201ENST00000365039 107 ntBASIC2.65□□□□□ -1.99
CCDC116Q8IYX3 RNU6-571P-201ENST00000384128 107 ntBASIC2.65□□□□□ -1.99
CCDC116Q8IYX3 MIR653-201ENST00000385279 96 ntBASIC2.65□□□□□ -1.99
CCDC116Q8IYX3 RNU6-380P-201ENST00000410207 107 ntBASIC2.65□□□□□ -1.99
CCDC116Q8IYX3 SCARNA18B-201ENST00000458806 135 ntBASIC2.65□□□□□ -1.99
CCDC116Q8IYX3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC116Q8IYX3 AC006386.2-201ENST00000624491 75 ntBASIC2.65□□□□□ -1.99
CCDC116Q8IYX3 AC012005.1-201ENST00000624575 75 ntBASIC2.65□□□□□ -1.99
CCDC116Q8IYX3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.65□□□□□ -1.99
CCDC116Q8IYX3 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
CCDC116Q8IYX3 RNA5SP432-201ENST00000362480 116 ntBASIC2.64□□□□□ -1.99
CCDC116Q8IYX3 RNA5SP48-201ENST00000363969 126 ntBASIC2.64□□□□□ -1.99
CCDC116Q8IYX3 SNORA44-201ENST00000384584 132 ntBASIC2.64□□□□□ -1.99
CCDC116Q8IYX3 BX276092.1-201ENST00000427368 251 ntBASIC2.64□□□□□ -1.99
CCDC116Q8IYX3 AL139132.1-201ENST00000431587 344 ntBASIC2.64□□□□□ -1.99
CCDC116Q8IYX3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC116Q8IYX3 SNORD111.1-201ENST00000516421 86 ntBASIC2.64□□□□□ -1.99
CCDC116Q8IYX3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC116Q8IYX3 MIR3134-201ENST00000579433 74 ntBASIC2.64□□□□□ -1.99
CCDC116Q8IYX3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CCDC116Q8IYX3 AC131280.1-202ENST00000624067 4211 ntBASIC2.63□□□□□ -1.99
CCDC116Q8IYX3 SNORA72.6-201ENST00000384520 129 ntBASIC2.63□□□□□ -1.99
CCDC116Q8IYX3 MIR588-201ENST00000384900 83 ntBASIC2.63□□□□□ -1.99
CCDC116Q8IYX3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CCDC116Q8IYX3 RNA5SP270-201ENST00000411361 118 ntBASIC2.63□□□□□ -1.99
CCDC116Q8IYX3 AC003982.1-202ENST00000469928 248 ntBASIC2.63□□□□□ -1.99
CCDC116Q8IYX3 AC023790.1-201ENST00000482174 347 ntBASIC2.63□□□□□ -1.99
CCDC116Q8IYX3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.63□□□□□ -1.99
CCDC116Q8IYX3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
CCDC116Q8IYX3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC116Q8IYX3 RNU6-161P-201ENST00000363051 106 ntBASIC2.62□□□□□ -1.99
CCDC116Q8IYX3 RNU6-811P-201ENST00000384069 107 ntBASIC2.62□□□□□ -1.99
CCDC116Q8IYX3 AC005908.1-201ENST00000468701 347 ntBASIC2.62□□□□□ -1.99
CCDC116Q8IYX3 RNA5SP82-201ENST00000516707 92 ntBASIC2.62□□□□□ -1.99
CCDC116Q8IYX3 MIR3605-201ENST00000583214 100 ntBASIC2.62□□□□□ -1.99
CCDC116Q8IYX3 PRELID3BP2-201ENST00000605362 201 ntBASIC2.62□□□□□ -1.99
CCDC116Q8IYX3 Y_RNA.119-201ENST00000363301 96 ntBASIC2.61□□□□□ -1.99
CCDC116Q8IYX3 MIR194-1-201ENST00000384892 85 ntBASIC2.61□□□□□ -1.99
CCDC116Q8IYX3 MIR563-201ENST00000385080 79 ntBASIC2.61□□□□□ -1.99
CCDC116Q8IYX3 RNA5SP292-201ENST00000390974 118 ntBASIC2.61□□□□□ -1.99
CCDC116Q8IYX3 AC004965.1-201ENST00000413033 213 ntBASIC2.61□□□□□ -1.99
CCDC116Q8IYX3 RNU6-1108P-201ENST00000516308 104 ntBASIC2.61□□□□□ -1.99
CCDC116Q8IYX3 SNORA4-201ENST00000584302 138 ntBASIC2.61□□□□□ -1.99
CCDC116Q8IYX3 AC245884.12-201ENST00000615364 59 ntBASIC2.61□□□□□ -1.99
CCDC116Q8IYX3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC116Q8IYX3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC116Q8IYX3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.6□□□□□ -1.99
CCDC116Q8IYX3 MIR26A1-201ENST00000362205 77 ntBASIC2.6□□□□□ -1.99
CCDC116Q8IYX3 RNU6-411P-201ENST00000384451 107 ntBASIC2.6□□□□□ -1.99
CCDC116Q8IYX3 RNA5SP450-201ENST00000411206 102 ntBASIC2.6□□□□□ -1.99
CCDC116Q8IYX3 FGF7P7-201ENST00000514120 227 ntBASIC2.6□□□□□ -1.99
CCDC116Q8IYX3 Y_RNA.660-201ENST00000516002 120 ntBASIC2.6□□□□□ -1.99
CCDC116Q8IYX3 SNORA9.3-201ENST00000516383 129 ntBASIC2.6□□□□□ -1.99
CCDC116Q8IYX3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC116Q8IYX3 MIR4536-1-201ENST00000583537 88 ntBASIC2.6□□□□□ -1.99
CCDC116Q8IYX3 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.6□□□□□ -1.99
CCDC116Q8IYX3 MIR7106-201ENST00000612419 65 ntBASIC2.6□□□□□ -1.99
CCDC116Q8IYX3 AL137790.1-201ENST00000634283 177 ntBASIC2.6□□□□□ -1.99
CCDC116Q8IYX3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC116Q8IYX3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC116Q8IYX3 SNORA25.9-201ENST00000365087 128 ntBASIC2.59□□□□□ -1.99
CCDC116Q8IYX3 RNA5SP126-201ENST00000365092 109 ntBASIC2.59□□□□□ -1.99
CCDC116Q8IYX3 SNORD88.1-201ENST00000408684 91 ntBASIC2.59□□□□□ -1.99
CCDC116Q8IYX3 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.59□□□□□ -1.99
CCDC116Q8IYX3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CCDC116Q8IYX3 MIR6740-201ENST00000618268 113 ntBASIC2.59□□□□□ -1.99
CCDC116Q8IYX3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC116Q8IYX3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CCDC116Q8IYX3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.59□□□□□ -2
CCDC116Q8IYX3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.58□□□□□ -2
CCDC116Q8IYX3 SNORA5B-201ENST00000363786 132 ntBASIC2.58□□□□□ -2
CCDC116Q8IYX3 SNORA80A-201ENST00000363922 136 ntBASIC2.58□□□□□ -2
CCDC116Q8IYX3 SNORA40.18-201ENST00000391200 128 ntBASIC2.58□□□□□ -2
CCDC116Q8IYX3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.58□□□□□ -2
CCDC116Q8IYX3 AC087499.2-201ENST00000432861 149 ntBASIC2.58□□□□□ -2
CCDC116Q8IYX3 SNORA18.5-201ENST00000516616 101 ntBASIC2.58□□□□□ -2
CCDC116Q8IYX3 RNU6-539P-201ENST00000516665 103 ntBASIC2.58□□□□□ -2
CCDC116Q8IYX3 AP000942.3-201ENST00000603702 160 ntBASIC2.58□□□□□ -2
CCDC116Q8IYX3 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.58□□□□□ -2
CCDC116Q8IYX3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CCDC116Q8IYX3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.57□□□□□ -2
CCDC116Q8IYX3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.57□□□□□ -2
CCDC116Q8IYX3 AC008163.1-202ENST00000636004 2889 ntBASIC2.57□□□□□ -2
CCDC116Q8IYX3 SNORD36A-201ENST00000362874 73 ntBASIC2.57□□□□□ -2
CCDC116Q8IYX3 RNU1-112P-201ENST00000364401 164 ntBASIC2.57□□□□□ -2
CCDC116Q8IYX3 RNA5SP259-201ENST00000365541 109 ntBASIC2.57□□□□□ -2
CCDC116Q8IYX3 HSPE1P24-201ENST00000450782 238 ntBASIC2.57□□□□□ -2
CCDC116Q8IYX3 MIR3192-201ENST00000584920 77 ntBASIC2.57□□□□□ -2
CCDC116Q8IYX3 AL096861.1-201ENST00000610899 123 ntBASIC2.57□□□□□ -2
CCDC116Q8IYX3 MIR6895-201ENST00000613497 78 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 184.9 ms