Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 MIR507-201ENST00000385234 94 ntBASIC-3.1□□□□□ -2.91
LINC00643Q86TS7 RNU7-63P-201ENST00000459054 62 ntBASIC-3.1□□□□□ -2.91
LINC00643Q86TS7 AC024933.1-201ENST00000608472 348 ntBASIC-3.1□□□□□ -2.91
LINC00643Q86TS7 Y_RNA.72-201ENST00000362894 103 ntBASIC-3.11□□□□□ -2.91
LINC00643Q86TS7 RNU6-1200P-201ENST00000384162 107 ntBASIC-3.11□□□□□ -2.91
LINC00643Q86TS7 Y_RNA.458-201ENST00000384240 102 ntBASIC-3.11□□□□□ -2.91
LINC00643Q86TS7 Y_RNA.470-201ENST00000384307 117 ntBASIC-3.11□□□□□ -2.91
LINC00643Q86TS7 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-3.11□□□□□ -2.91
LINC00643Q86TS7 Y_RNA.678-201ENST00000516408 96 ntBASIC-3.11□□□□□ -2.91
LINC00643Q86TS7 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-3.11□□□□□ -2.91
LINC00643Q86TS7 Y_RNA.374-201ENST00000365606 101 ntBASIC-3.12□□□□□ -2.91
LINC00643Q86TS7 MIR548H3-201ENST00000408771 118 ntBASIC-3.12□□□□□ -2.91
LINC00643Q86TS7 Y_RNA.596-201ENST00000410462 109 ntBASIC-3.12□□□□□ -2.91
LINC00643Q86TS7 RNU6-126P-201ENST00000516685 103 ntBASIC-3.12□□□□□ -2.91
LINC00643Q86TS7 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-3.12□□□□□ -2.91
LINC00643Q86TS7 AC144568.1-201ENST00000520139 137 ntBASIC-3.12□□□□□ -2.91
LINC00643Q86TS7 AC084781.2-201ENST00000615568 161 ntBASIC-3.12□□□□□ -2.91
LINC00643Q86TS7 RNU6-1120P-201ENST00000362988 108 ntBASIC-3.13□□□□□ -2.91
LINC00643Q86TS7 RNU6-181P-201ENST00000363225 107 ntBASIC-3.13□□□□□ -2.91
LINC00643Q86TS7 Y_RNA.515-201ENST00000384535 112 ntBASIC-3.13□□□□□ -2.91
LINC00643Q86TS7 AC024067.1-201ENST00000426199 223 ntBASIC-3.13□□□□□ -2.91
LINC00643Q86TS7 RNU6-445P-201ENST00000516949 107 ntBASIC-3.13□□□□□ -2.91
LINC00643Q86TS7 AC005014.3-201ENST00000605985 190 ntBASIC-3.13□□□□□ -2.91
LINC00643Q86TS7 MIR335-201ENST00000362173 94 ntBASIC-3.14□□□□□ -2.91
LINC00643Q86TS7 RNU6-1301P-201ENST00000362724 104 ntBASIC-3.14□□□□□ -2.91
LINC00643Q86TS7 Y_RNA.250-201ENST00000364542 110 ntBASIC-3.14□□□□□ -2.91
LINC00643Q86TS7 SNORA72.4-201ENST00000384174 132 ntBASIC-3.14□□□□□ -2.91
LINC00643Q86TS7 RNY3P4-201ENST00000384428 101 ntBASIC-3.14□□□□□ -2.91
LINC00643Q86TS7 AL353691.2-201ENST00000443795 59 ntBASIC-3.14□□□□□ -2.91
LINC00643Q86TS7 Y_RNA.653-201ENST00000459091 95 ntBASIC-3.14□□□□□ -2.91
LINC00643Q86TS7 Y_RNA.136-201ENST00000363444 102 ntBASIC-3.15□□□□□ -2.91
LINC00643Q86TS7 RNU6-596P-201ENST00000365395 98 ntBASIC-3.15□□□□□ -2.91
LINC00643Q86TS7 Y_RNA.502-201ENST00000384478 113 ntBASIC-3.15□□□□□ -2.91
LINC00643Q86TS7 RNU6-1321P-201ENST00000390905 107 ntBASIC-3.15□□□□□ -2.91
LINC00643Q86TS7 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-3.15□□□□□ -2.91
LINC00643Q86TS7 RNU6-720P-201ENST00000516363 108 ntBASIC-3.15□□□□□ -2.91
LINC00643Q86TS7 U6.100-201ENST00000636230 99 ntBASIC-3.15□□□□□ -2.91
LINC00643Q86TS7 RNU6-874P-201ENST00000362390 105 ntBASIC-3.16□□□□□ -2.92
LINC00643Q86TS7 RNU6-1233P-201ENST00000362922 102 ntBASIC-3.16□□□□□ -2.92
LINC00643Q86TS7 RNU6-522P-201ENST00000364497 107 ntBASIC-3.16□□□□□ -2.92
LINC00643Q86TS7 AC006504.6-201ENST00000590142 199 ntBASIC-3.16□□□□□ -2.92
LINC00643Q86TS7 TRDV1-202ENST00000621643 102 ntBASIC-3.16□□□□□ -2.92
LINC00643Q86TS7 SNORA63.6-201ENST00000364921 119 ntBASIC-3.17□□□□□ -2.92
LINC00643Q86TS7 RNU6-54P-201ENST00000365563 107 ntBASIC-3.17□□□□□ -2.92
LINC00643Q86TS7 RNU6-400P-201ENST00000391173 106 ntBASIC-3.17□□□□□ -2.92
LINC00643Q86TS7 SNORD75.2-201ENST00000408784 58 ntBASIC-3.17□□□□□ -2.92
LINC00643Q86TS7 RNU7-48P-201ENST00000458875 63 ntBASIC-3.17□□□□□ -2.92
LINC00643Q86TS7 RNU6-1333P-201ENST00000516162 93 ntBASIC-3.17□□□□□ -2.92
LINC00643Q86TS7 RNU6-751P-201ENST00000516382 101 ntBASIC-3.17□□□□□ -2.92
LINC00643Q86TS7 MIR5701-3-201ENST00000578890 82 ntBASIC-3.17□□□□□ -2.92
LINC00643Q86TS7 MIR5701-1-201ENST00000585138 82 ntBASIC-3.17□□□□□ -2.92
LINC00643Q86TS7 MIR5701-2-201ENST00000615634 82 ntBASIC-3.17□□□□□ -2.92
LINC00643Q86TS7 Y_RNA.66-201ENST00000362862 102 ntBASIC-3.18□□□□□ -2.92
LINC00643Q86TS7 RNU4-68P-201ENST00000364314 141 ntBASIC-3.18□□□□□ -2.92
LINC00643Q86TS7 RNU4-10P-201ENST00000364383 140 ntBASIC-3.18□□□□□ -2.92
LINC00643Q86TS7 SNORD115-22-201ENST00000364456 82 ntBASIC-3.18□□□□□ -2.92
LINC00643Q86TS7 RNU6-20P-201ENST00000384106 107 ntBASIC-3.18□□□□□ -2.92
LINC00643Q86TS7 MTATP6P19-201ENST00000413797 659 ntBASIC-3.18□□□□□ -2.92
LINC00643Q86TS7 RNU7-113P-201ENST00000459273 62 ntBASIC-3.18□□□□□ -2.92
LINC00643Q86TS7 RNU6-228P-201ENST00000362700 106 ntBASIC-3.19□□□□□ -2.92
LINC00643Q86TS7 RNU6-38P-201ENST00000384085 107 ntBASIC-3.19□□□□□ -2.92
LINC00643Q86TS7 MTND3P16-201ENST00000452205 344 ntBASIC-3.19□□□□□ -2.92
LINC00643Q86TS7 RNU6-1057P-201ENST00000517162 102 ntBASIC-3.19□□□□□ -2.92
LINC00643Q86TS7 Y_RNA.342-201ENST00000365352 113 ntBASIC-3.2□□□□□ -2.92
LINC00643Q86TS7 MIR487B-201ENST00000385021 84 ntBASIC-3.2□□□□□ -2.92
LINC00643Q86TS7 SNORD37.1-201ENST00000390968 65 ntBASIC-3.2□□□□□ -2.92
LINC00643Q86TS7 SNORD115-47-201ENST00000391226 86 ntBASIC-3.2□□□□□ -2.92
LINC00643Q86TS7 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-3.2□□□□□ -2.92
LINC00643Q86TS7 RNU6-168P-201ENST00000516189 101 ntBASIC-3.2□□□□□ -2.92
LINC00643Q86TS7 MIR5197-201ENST00000583721 112 ntBASIC-3.2□□□□□ -2.92
LINC00643Q86TS7 DEFB117-201ENST00000602356 141 ntBASIC-3.2□□□□□ -2.92
LINC00643Q86TS7 AC108081.1-201ENST00000604358 221 ntBASIC-3.2□□□□□ -2.92
LINC00643Q86TS7 AP001362.1-201ENST00000625165 124 ntBASIC-3.2□□□□□ -2.92
LINC00643Q86TS7 FGF7P2-201ENST00000332473 296 ntBASIC-3.21□□□□□ -2.92
LINC00643Q86TS7 Y_RNA.98-201ENST00000363109 102 ntBASIC-3.21□□□□□ -2.92
LINC00643Q86TS7 RNU6-626P-201ENST00000363354 107 ntBASIC-3.21□□□□□ -2.92
LINC00643Q86TS7 MIR516A2-201ENST00000384888 90 ntBASIC-3.21□□□□□ -2.92
LINC00643Q86TS7 MIR516A1-201ENST00000385033 90 ntBASIC-3.21□□□□□ -2.92
LINC00643Q86TS7 AC108019.1-201ENST00000512540 175 ntBASIC-3.21□□□□□ -2.92
LINC00643Q86TS7 RNU7-70P-201ENST00000516941 66 ntBASIC-3.21□□□□□ -2.92
LINC00643Q86TS7 Y_RNA.48-201ENST00000362710 103 ntBASIC-3.22□□□□□ -2.92
LINC00643Q86TS7 RNA5SP476-201ENST00000516613 103 ntBASIC-3.22□□□□□ -2.92
LINC00643Q86TS7 MIR4999-201ENST00000585029 91 ntBASIC-3.22□□□□□ -2.92
LINC00643Q86TS7 RNU6-254P-201ENST00000363377 107 ntBASIC-3.23□□□□□ -2.93
LINC00643Q86TS7 SNORD115-20-201ENST00000365099 82 ntBASIC-3.23□□□□□ -2.93
LINC00643Q86TS7 RNU6-1290P-201ENST00000362957 109 ntBASIC-3.24□□□□□ -2.93
LINC00643Q86TS7 Y_RNA.304-201ENST00000365011 112 ntBASIC-3.24□□□□□ -2.93
LINC00643Q86TS7 Y_RNA.448-201ENST00000384185 108 ntBASIC-3.24□□□□□ -2.93
LINC00643Q86TS7 Y_RNA.461-201ENST00000384263 103 ntBASIC-3.24□□□□□ -2.93
LINC00643Q86TS7 RNU6-383P-201ENST00000410864 94 ntBASIC-3.24□□□□□ -2.93
LINC00643Q86TS7 MTND1P34-201ENST00000438556 671 ntBASIC-3.24□□□□□ -2.93
LINC00643Q86TS7 RNU6-397P-201ENST00000516226 104 ntBASIC-3.24□□□□□ -2.93
LINC00643Q86TS7 AP000240.1-201ENST00000609910 452 ntBASIC-3.24□□□□□ -2.93
LINC00643Q86TS7 AC099654.14-201ENST00000638599 341 ntBASIC-3.24□□□□□ -2.93
LINC00643Q86TS7 Y_RNA.54-201ENST00000362766 105 ntBASIC-3.25□□□□□ -2.93
LINC00643Q86TS7 Y_RNA.145-201ENST00000363527 102 ntBASIC-3.25□□□□□ -2.93
LINC00643Q86TS7 Y_RNA.225-201ENST00000364326 97 ntBASIC-3.25□□□□□ -2.93
LINC00643Q86TS7 AL161932.1-201ENST00000437408 146 ntBASIC-3.25□□□□□ -2.93
LINC00643Q86TS7 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-3.25□□□□□ -2.93
LINC00643Q86TS7 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-3.25□□□□□ -2.93
Retrieved 100 of 98,524 protein–RNA pairs in 175.8 ms