Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
NCBP3Q53F19 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
NCBP3Q53F19 SNORD116-24-201ENST00000384549 92 ntBASIC4.52□□□□□ -1.69
NCBP3Q53F19 MIR524-201ENST00000385242 87 ntBASIC4.52□□□□□ -1.69
NCBP3Q53F19 RNU6ATAC37P-201ENST00000408328 131 ntBASIC4.52□□□□□ -1.69
NCBP3Q53F19 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4.52□□□□□ -1.69
NCBP3Q53F19 RPL30P7-201ENST00000479312 323 ntBASIC4.52□□□□□ -1.69
NCBP3Q53F19 IGKV2-26-201ENST00000518305 343 ntBASIC4.52□□□□□ -1.69
NCBP3Q53F19 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
NCBP3Q53F19 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.51□□□□□ -1.69
NCBP3Q53F19 FTX-214ENST00000638437 12267 ntTSL 5 BASIC4.51□□□□□ -1.69
NCBP3Q53F19 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
NCBP3Q53F19 RNA5SP119-201ENST00000362715 117 ntBASIC4.51□□□□□ -1.69
NCBP3Q53F19 SNORD113.1-201ENST00000363280 73 ntBASIC4.51□□□□□ -1.69
NCBP3Q53F19 MIR194-1-201ENST00000384892 85 ntBASIC4.51□□□□□ -1.69
NCBP3Q53F19 RNU6-1052P-201ENST00000411398 104 ntBASIC4.51□□□□□ -1.69
NCBP3Q53F19 RNU6-719P-201ENST00000516671 104 ntBASIC4.51□□□□□ -1.69
NCBP3Q53F19 MIR548H5-201ENST00000580314 60 ntBASIC4.51□□□□□ -1.69
NCBP3Q53F19 U4.6-201ENST00000621618 127 ntBASIC4.51□□□□□ -1.69
NCBP3Q53F19 U6.100-201ENST00000636230 99 ntBASIC4.51□□□□□ -1.69
NCBP3Q53F19 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
NCBP3Q53F19 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NCBP3Q53F19 AC093908.1-201ENST00000623125 8092 ntBASIC4.5□□□□□ -1.69
NCBP3Q53F19 RNU1-52P-201ENST00000384190 164 ntBASIC4.5□□□□□ -1.69
NCBP3Q53F19 AC013244.2-201ENST00000603396 103 ntBASIC4.5□□□□□ -1.69
NCBP3Q53F19 RNU7-10P-201ENST00000607194 63 ntBASIC4.5□□□□□ -1.69
NCBP3Q53F19 U6.81-201ENST00000612550 106 ntBASIC4.5□□□□□ -1.69
NCBP3Q53F19 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
NCBP3Q53F19 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
NCBP3Q53F19 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
NCBP3Q53F19 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
NCBP3Q53F19 RNU6-824P-201ENST00000363724 104 ntBASIC4.49□□□□□ -1.69
NCBP3Q53F19 MT-TN-201ENST00000387400 73 ntBASIC4.49□□□□□ -1.69
NCBP3Q53F19 RN7SL442P-201ENST00000473804 320 ntBASIC4.49□□□□□ -1.69
NCBP3Q53F19 AP004217.1-201ENST00000480579 346 ntBASIC4.49□□□□□ -1.69
NCBP3Q53F19 AC007179.3-201ENST00000604976 235 ntBASIC4.49□□□□□ -1.69
NCBP3Q53F19 U3.45-201ENST00000607547 219 ntBASIC4.49□□□□□ -1.69
NCBP3Q53F19 DLEU2_3.2-201ENST00000612883 73 ntBASIC4.49□□□□□ -1.69
NCBP3Q53F19 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
NCBP3Q53F19 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NCBP3Q53F19 RNU6-604P-201ENST00000390917 100 ntBASIC4.48□□□□□ -1.69
NCBP3Q53F19 AC110620.1-201ENST00000416042 228 ntBASIC4.48□□□□□ -1.69
NCBP3Q53F19 MAPK10-266ENST00000641066 6555 ntBASIC4.48□□□□□ -1.69
NCBP3Q53F19 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
NCBP3Q53F19 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NCBP3Q53F19 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NCBP3Q53F19 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NCBP3Q53F19 RNU6-1260P-201ENST00000362944 107 ntBASIC4.47□□□□□ -1.69
NCBP3Q53F19 RNU1-33P-201ENST00000364249 162 ntBASIC4.47□□□□□ -1.69
NCBP3Q53F19 RNU1-36P-201ENST00000365130 165 ntBASIC4.47□□□□□ -1.69
NCBP3Q53F19 MIR218-2-201ENST00000385006 110 ntBASIC4.47□□□□□ -1.69
NCBP3Q53F19 RN7SL274P-201ENST00000492268 272 ntBASIC4.47□□□□□ -1.69
NCBP3Q53F19 MIR2276-201ENST00000516886 89 ntBASIC4.47□□□□□ -1.69
NCBP3Q53F19 RNA5SP380-201ENST00000517190 98 ntBASIC4.47□□□□□ -1.69
NCBP3Q53F19 SNORA70.24-201ENST00000517233 118 ntBASIC4.47□□□□□ -1.69
NCBP3Q53F19 MIR3922-201ENST00000585192 84 ntBASIC4.47□□□□□ -1.69
NCBP3Q53F19 AC073476.4-201ENST00000628409 72 ntBASIC4.47□□□□□ -1.69
NCBP3Q53F19 AC093010.3-201ENST00000570269 15214 ntBASIC4.46□□□□□ -1.7
NCBP3Q53F19 RNU4-35P-201ENST00000362588 141 ntBASIC4.46□□□□□ -1.7
NCBP3Q53F19 MIR483-201ENST00000385070 76 ntBASIC4.46□□□□□ -1.7
NCBP3Q53F19 MIR513A1-201ENST00000385138 129 ntBASIC4.46□□□□□ -1.7
NCBP3Q53F19 MIR519A1-201ENST00000385257 85 ntBASIC4.46□□□□□ -1.7
NCBP3Q53F19 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC4.46□□□□□ -1.7
NCBP3Q53F19 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
NCBP3Q53F19 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NCBP3Q53F19 MIR30E-201ENST00000362104 92 ntBASIC4.45□□□□□ -1.7
NCBP3Q53F19 MIR491-201ENST00000384877 84 ntBASIC4.45□□□□□ -1.7
NCBP3Q53F19 AC079150.2-201ENST00000443733 78 ntBASIC4.45□□□□□ -1.7
NCBP3Q53F19 EIF4BP1-201ENST00000554881 351 ntBASIC4.45□□□□□ -1.7
NCBP3Q53F19 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC4.45□□□□□ -1.7
NCBP3Q53F19 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NCBP3Q53F19 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
NCBP3Q53F19 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NCBP3Q53F19 SNORA24B-201ENST00000384176 131 ntBASIC4.44□□□□□ -1.7
NCBP3Q53F19 RNU6-1054P-201ENST00000411293 104 ntBASIC4.44□□□□□ -1.7
NCBP3Q53F19 MIR4506-201ENST00000584693 77 ntBASIC4.44□□□□□ -1.7
NCBP3Q53F19 MIR6516-201ENST00000630554 81 ntBASIC4.44□□□□□ -1.7
NCBP3Q53F19 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NCBP3Q53F19 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
NCBP3Q53F19 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NCBP3Q53F19 RN7SL293P-201ENST00000481765 281 ntBASIC4.43□□□□□ -1.7
NCBP3Q53F19 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.43□□□□□ -1.7
NCBP3Q53F19 MIR5194-201ENST00000582634 120 ntBASIC4.43□□□□□ -1.7
NCBP3Q53F19 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC4.43□□□□□ -1.7
NCBP3Q53F19 AC007318.2-201ENST00000620999 243 ntBASIC4.43□□□□□ -1.7
NCBP3Q53F19 MIR7153-201ENST00000637758 57 ntBASIC4.43□□□□□ -1.7
NCBP3Q53F19 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NCBP3Q53F19 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC4.43□□□□□ -1.7
NCBP3Q53F19 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC4.43□□□□□ -1.7
NCBP3Q53F19 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.43□□□□□ -1.7
NCBP3Q53F19 MIR183-201ENST00000384958 110 ntBASIC4.42□□□□□ -1.7
NCBP3Q53F19 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC4.42□□□□□ -1.7
NCBP3Q53F19 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NCBP3Q53F19 MIR34B-201ENST00000385076 84 ntBASIC4.41□□□□□ -1.7
NCBP3Q53F19 RNU6-947P-201ENST00000516264 106 ntBASIC4.41□□□□□ -1.7
NCBP3Q53F19 AC069503.3-201ENST00000618674 145 ntBASIC4.41□□□□□ -1.7
NCBP3Q53F19 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NCBP3Q53F19 MIR184-201ENST00000384962 84 ntBASIC4.4□□□□□ -1.71
NCBP3Q53F19 RNA5SP229-201ENST00000410809 99 ntBASIC4.4□□□□□ -1.71
NCBP3Q53F19 AC025518.1-201ENST00000479856 347 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms