Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
PKNOX1P55347 RNU6-985P-201ENST00000410182 104 ntBASIC0.05□□□□□ -2.4
PKNOX1P55347 AC069271.1-201ENST00000445577 156 ntBASIC0.05□□□□□ -2.4
PKNOX1P55347 TRBVB-201ENST00000477100 408 ntBASIC0.05□□□□□ -2.4
PKNOX1P55347 AL442663.2-201ENST00000554385 511 ntBASIC0.05□□□□□ -2.4
PKNOX1P55347 MIR4282-201ENST00000583613 67 ntBASIC0.05□□□□□ -2.4
PKNOX1P55347 AL365265.1-201ENST00000621045 234 ntBASIC0.05□□□□□ -2.4
PKNOX1P55347 MIR6828-201ENST00000636181 60 ntBASIC0.05□□□□□ -2.4
PKNOX1P55347 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
PKNOX1P55347 SNORA42.1-201ENST00000363515 137 ntBASIC0.04□□□□□ -2.4
PKNOX1P55347 Y_RNA.176-201ENST00000363815 109 ntBASIC0.04□□□□□ -2.4
PKNOX1P55347 RNU4-67P-201ENST00000364569 141 ntBASIC0.04□□□□□ -2.4
PKNOX1P55347 Y_RNA.355-201ENST00000365462 98 ntBASIC0.04□□□□□ -2.4
PKNOX1P55347 RNU6-949P-201ENST00000384040 107 ntBASIC0.04□□□□□ -2.4
PKNOX1P55347 MIR613-201ENST00000385248 95 ntBASIC0.04□□□□□ -2.4
PKNOX1P55347 SUMO1P3-201ENST00000439961 304 ntBASIC0.04□□□□□ -2.4
PKNOX1P55347 MIR3152-201ENST00000579801 74 ntBASIC0.04□□□□□ -2.4
PKNOX1P55347 AC021613.1-201ENST00000623880 111 ntBASIC0.04□□□□□ -2.4
PKNOX1P55347 SNORA22.1-201ENST00000362701 134 ntBASIC0.03□□□□□ -2.4
PKNOX1P55347 RNU6-291P-201ENST00000384720 107 ntBASIC0.03□□□□□ -2.4
PKNOX1P55347 Y_RNA.590-201ENST00000410140 107 ntBASIC0.03□□□□□ -2.4
PKNOX1P55347 SEPT7P4-201ENST00000437076 306 ntBASIC0.03□□□□□ -2.4
PKNOX1P55347 Y_RNA.174-201ENST00000363781 105 ntBASIC0.02□□□□□ -2.41
PKNOX1P55347 Y_RNA.476-201ENST00000384347 108 ntBASIC0.02□□□□□ -2.41
PKNOX1P55347 Y_RNA.512-201ENST00000384518 102 ntBASIC0.02□□□□□ -2.41
PKNOX1P55347 SNORA72.6-201ENST00000384520 129 ntBASIC0.02□□□□□ -2.41
PKNOX1P55347 SNORA20-201ENST00000384662 132 ntBASIC0.02□□□□□ -2.41
PKNOX1P55347 RNU6-1109P-201ENST00000391187 107 ntBASIC0.02□□□□□ -2.41
PKNOX1P55347 RNU4-43P-201ENST00000410628 137 ntBASIC0.02□□□□□ -2.41
PKNOX1P55347 SCARNA16.5-201ENST00000517114 183 ntBASIC0.02□□□□□ -2.41
PKNOX1P55347 RNA5SP47-201ENST00000517230 109 ntBASIC0.02□□□□□ -2.41
PKNOX1P55347 MTND5P34-201ENST00000568888 325 ntBASIC0.02□□□□□ -2.41
PKNOX1P55347 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.02□□□□□ -2.41
PKNOX1P55347 Y_RNA.36-201ENST00000362602 112 ntBASIC0.01□□□□□ -2.41
PKNOX1P55347 SNORD114-16-201ENST00000363044 70 ntBASIC0.01□□□□□ -2.41
PKNOX1P55347 Y_RNA.202-201ENST00000364083 110 ntBASIC0.01□□□□□ -2.41
PKNOX1P55347 SNORD114-9-201ENST00000364370 72 ntBASIC0.01□□□□□ -2.41
PKNOX1P55347 RNU6-728P-201ENST00000365375 104 ntBASIC0.01□□□□□ -2.41
PKNOX1P55347 SNORA33.2-201ENST00000365413 134 ntBASIC0.01□□□□□ -2.41
PKNOX1P55347 RNU4-17P-201ENST00000365598 141 ntBASIC0.01□□□□□ -2.41
PKNOX1P55347 Y_RNA.393-201ENST00000383936 102 ntBASIC0.01□□□□□ -2.41
PKNOX1P55347 Y_RNA.416-201ENST00000384014 113 ntBASIC0.01□□□□□ -2.41
PKNOX1P55347 RNU6-187P-201ENST00000384139 106 ntBASIC0.01□□□□□ -2.41
PKNOX1P55347 SNORA18-201ENST00000384416 132 ntBASIC0.01□□□□□ -2.41
PKNOX1P55347 Y_RNA.536-201ENST00000384621 113 ntBASIC0.01□□□□□ -2.41
PKNOX1P55347 Y_RNA.539-201ENST00000384635 107 ntBASIC0.01□□□□□ -2.41
PKNOX1P55347 MTCYBP6-201ENST00000441810 138 ntBASIC0.01□□□□□ -2.41
PKNOX1P55347 SNORA25.16-201ENST00000516741 121 ntBASIC0.01□□□□□ -2.41
PKNOX1P55347 SCARNA15-202ENST00000516881 127 ntBASIC0.01□□□□□ -2.41
PKNOX1P55347 AC023932.2-201ENST00000603176 175 ntBASIC0.01□□□□□ -2.41
PKNOX1P55347 PVT1_3.1-201ENST00000620853 95 ntBASIC0.01□□□□□ -2.41
PKNOX1P55347 MIR335-201ENST00000362173 94 ntBASIC0□□□□□ -2.41
PKNOX1P55347 RNU6-867P-201ENST00000364956 107 ntBASIC0□□□□□ -2.41
PKNOX1P55347 RNY1P13-201ENST00000365030 105 ntBASIC0□□□□□ -2.41
PKNOX1P55347 SNORD28-201ENST00000384706 75 ntBASIC0□□□□□ -2.41
PKNOX1P55347 PCNPP3-201ENST00000393579 471 ntBASIC0□□□□□ -2.41
PKNOX1P55347 SNORA79-201ENST00000408376 140 ntBASIC0□□□□□ -2.41
PKNOX1P55347 RNA5SP227-201ENST00000516184 113 ntBASIC0□□□□□ -2.41
PKNOX1P55347 Y_RNA.679-201ENST00000516416 91 ntBASIC0□□□□□ -2.41
PKNOX1P55347 RNU6-135P-201ENST00000516769 101 ntBASIC0□□□□□ -2.41
PKNOX1P55347 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0□□□□□ -2.41
PKNOX1P55347 AP001094.1-201ENST00000579805 193 ntBASIC0□□□□□ -2.41
PKNOX1P55347 AL356055.1-201ENST00000602528 446 ntBASIC0□□□□□ -2.41
PKNOX1P55347 RNA5SP214-201ENST00000363378 118 ntBASIC-0.01□□□□□ -2.41
PKNOX1P55347 RNU6-978P-201ENST00000364371 103 ntBASIC-0.01□□□□□ -2.41
PKNOX1P55347 RNU6-535P-201ENST00000384722 107 ntBASIC-0.01□□□□□ -2.41
PKNOX1P55347 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.01□□□□□ -2.41
PKNOX1P55347 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.01□□□□□ -2.41
PKNOX1P55347 MIR4667-201ENST00000578933 66 ntBASIC-0.01□□□□□ -2.41
PKNOX1P55347 SNORA9.1-201ENST00000362412 131 ntBASIC-0.02□□□□□ -2.41
PKNOX1P55347 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.02□□□□□ -2.41
PKNOX1P55347 RNU4-16P-201ENST00000364737 141 ntBASIC-0.02□□□□□ -2.41
PKNOX1P55347 RNU6-716P-201ENST00000365621 103 ntBASIC-0.02□□□□□ -2.41
PKNOX1P55347 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.02□□□□□ -2.41
PKNOX1P55347 MT-TW-201ENST00000387382 68 ntBASIC-0.02□□□□□ -2.41
PKNOX1P55347 Y_RNA.673-201ENST00000516306 88 ntBASIC-0.02□□□□□ -2.41
PKNOX1P55347 MIR1273G-201ENST00000577677 100 ntBASIC-0.02□□□□□ -2.41
PKNOX1P55347 MIR4639-201ENST00000584938 69 ntBASIC-0.02□□□□□ -2.41
PKNOX1P55347 AC104408.1-201ENST00000605241 170 ntBASIC-0.02□□□□□ -2.41
PKNOX1P55347 AC011921.3-201ENST00000605540 361 ntBASIC-0.02□□□□□ -2.41
PKNOX1P55347 AC091304.10-201ENST00000641554 121 ntBASIC-0.02□□□□□ -2.41
PKNOX1P55347 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.03□□□□□ -2.41
PKNOX1P55347 RNU6-639P-201ENST00000384074 107 ntBASIC-0.03□□□□□ -2.41
PKNOX1P55347 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.03□□□□□ -2.41
PKNOX1P55347 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.03□□□□□ -2.41
PKNOX1P55347 RNU6-713P-201ENST00000384761 107 ntBASIC-0.03□□□□□ -2.41
PKNOX1P55347 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.03□□□□□ -2.41
PKNOX1P55347 MIR4643-201ENST00000577473 78 ntBASIC-0.03□□□□□ -2.41
PKNOX1P55347 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.03□□□□□ -2.41
PKNOX1P55347 MIR4768-201ENST00000585270 74 ntBASIC-0.03□□□□□ -2.41
PKNOX1P55347 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.03□□□□□ -2.41
PKNOX1P55347 RNU6-103P-201ENST00000363686 107 ntBASIC-0.04□□□□□ -2.42
PKNOX1P55347 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.04□□□□□ -2.42
PKNOX1P55347 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.04□□□□□ -2.42
PKNOX1P55347 SNORD116-25-201ENST00000516517 92 ntBASIC-0.04□□□□□ -2.42
PKNOX1P55347 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.04□□□□□ -2.42
PKNOX1P55347 RNU7-70P-201ENST00000516941 66 ntBASIC-0.04□□□□□ -2.42
PKNOX1P55347 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.04□□□□□ -2.42
PKNOX1P55347 AC244669.1-204ENST00000621564 178 ntBASIC-0.04□□□□□ -2.42
PKNOX1P55347 MTND5P32-201ENST00000560711 1802 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 289.8 ms