Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 RNA5SP356-201ENST00000515972 94 ntBASIC3.43□□□□□ -1.86
NUBP1P53384 TRDV1-202ENST00000621643 102 ntBASIC3.43□□□□□ -1.86
NUBP1P53384 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.43□□□□□ -1.86
NUBP1P53384 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NUBP1P53384 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NUBP1P53384 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.42□□□□□ -1.86
NUBP1P53384 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NUBP1P53384 MIR9-2-201ENST00000384838 87 ntBASIC3.42□□□□□ -1.86
NUBP1P53384 MIR519A1-201ENST00000385257 85 ntBASIC3.42□□□□□ -1.86
NUBP1P53384 RNU7-195P-201ENST00000458793 62 ntBASIC3.42□□□□□ -1.86
NUBP1P53384 Y_RNA.809-201ENST00000516058 95 ntBASIC3.42□□□□□ -1.86
NUBP1P53384 RNU11-2P-201ENST00000516898 142 ntBASIC3.42□□□□□ -1.86
NUBP1P53384 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.42□□□□□ -1.86
NUBP1P53384 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
NUBP1P53384 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NUBP1P53384 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.41□□□□□ -1.86
NUBP1P53384 SNORA25.3-201ENST00000363205 127 ntBASIC3.41□□□□□ -1.86
NUBP1P53384 Y_RNA.443-201ENST00000384135 111 ntBASIC3.41□□□□□ -1.86
NUBP1P53384 SNORD41-201ENST00000386967 70 ntBASIC3.41□□□□□ -1.86
NUBP1P53384 RNU6-922P-201ENST00000516753 99 ntBASIC3.41□□□□□ -1.86
NUBP1P53384 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.41□□□□□ -1.86
NUBP1P53384 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
NUBP1P53384 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NUBP1P53384 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.41□□□□□ -1.86
NUBP1P53384 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NUBP1P53384 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NUBP1P53384 RNU6-664P-201ENST00000362381 107 ntBASIC3.4□□□□□ -1.87
NUBP1P53384 RNU6-403P-201ENST00000363163 104 ntBASIC3.4□□□□□ -1.87
NUBP1P53384 SNORD101-201ENST00000384027 73 ntBASIC3.4□□□□□ -1.87
NUBP1P53384 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.4□□□□□ -1.87
NUBP1P53384 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.4□□□□□ -1.87
NUBP1P53384 MIR18B-201ENST00000454574 71 ntBASIC3.4□□□□□ -1.87
NUBP1P53384 MIR486-1-201ENST00000612171 68 ntBASIC3.4□□□□□ -1.87
NUBP1P53384 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
NUBP1P53384 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
NUBP1P53384 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
NUBP1P53384 MIR377-201ENST00000362145 69 ntBASIC3.39□□□□□ -1.87
NUBP1P53384 AC092185.1-201ENST00000491371 97 ntBASIC3.39□□□□□ -1.87
NUBP1P53384 TRAJ51-201ENST00000504127 63 ntBASIC3.39□□□□□ -1.87
NUBP1P53384 AC097510.1-201ENST00000510945 133 ntBASIC3.39□□□□□ -1.87
NUBP1P53384 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC3.39□□□□□ -1.87
NUBP1P53384 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.39□□□□□ -1.87
NUBP1P53384 ZNF209P-201ENST00000593450 2304 ntBASIC3.39□□□□□ -1.87
NUBP1P53384 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
NUBP1P53384 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
NUBP1P53384 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.39□□□□□ -1.87
NUBP1P53384 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NUBP1P53384 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NUBP1P53384 RNU6-1260P-201ENST00000362944 107 ntBASIC3.38□□□□□ -1.87
NUBP1P53384 SNORD56.5-201ENST00000364281 72 ntBASIC3.38□□□□□ -1.87
NUBP1P53384 Y_RNA.588-201ENST00000391254 102 ntBASIC3.38□□□□□ -1.87
NUBP1P53384 RNU6-881P-201ENST00000516813 102 ntBASIC3.38□□□□□ -1.87
NUBP1P53384 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
NUBP1P53384 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
NUBP1P53384 RNU1-36P-201ENST00000365130 165 ntBASIC3.37□□□□□ -1.87
NUBP1P53384 SNORA54-201ENST00000384281 123 ntBASIC3.37□□□□□ -1.87
NUBP1P53384 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.37□□□□□ -1.87
NUBP1P53384 RN7SL863P-201ENST00000462370 296 ntBASIC3.37□□□□□ -1.87
NUBP1P53384 MIR514B-201ENST00000516774 80 ntBASIC3.37□□□□□ -1.87
NUBP1P53384 RNVU1-4-201ENST00000612985 164 ntBASIC3.37□□□□□ -1.87
NUBP1P53384 DLEU2_3.1-201ENST00000620005 73 ntBASIC3.37□□□□□ -1.87
NUBP1P53384 AC103706.3-201ENST00000636297 85 ntBASIC3.37□□□□□ -1.87
NUBP1P53384 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
NUBP1P53384 Y_RNA.56-201ENST00000362798 112 ntBASIC3.36□□□□□ -1.87
NUBP1P53384 SNORD45.1-201ENST00000363181 77 ntBASIC3.36□□□□□ -1.87
NUBP1P53384 SNORD45A-201ENST00000384512 84 ntBASIC3.36□□□□□ -1.87
NUBP1P53384 MIR4696-201ENST00000581431 70 ntBASIC3.36□□□□□ -1.87
NUBP1P53384 MIR4658-201ENST00000584344 65 ntBASIC3.36□□□□□ -1.87
NUBP1P53384 GHRLOS.1-201ENST00000610995 70 ntBASIC3.36□□□□□ -1.87
NUBP1P53384 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NUBP1P53384 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NUBP1P53384 RNU6-141P-201ENST00000410499 105 ntBASIC3.35□□□□□ -1.87
NUBP1P53384 RNA5SP184-201ENST00000411071 108 ntBASIC3.35□□□□□ -1.87
NUBP1P53384 RNA5SP450-201ENST00000411206 102 ntBASIC3.35□□□□□ -1.87
NUBP1P53384 AC092628.1-201ENST00000436250 252 ntBASIC3.35□□□□□ -1.87
NUBP1P53384 MIR4529-201ENST00000578110 78 ntBASIC3.35□□□□□ -1.87
NUBP1P53384 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
NUBP1P53384 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.34□□□□□ -1.87
NUBP1P53384 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.34□□□□□ -1.87
NUBP1P53384 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
NUBP1P53384 RNU2-19P-201ENST00000517288 84 ntBASIC3.34□□□□□ -1.87
NUBP1P53384 MIR622-201ENST00000638396 96 ntBASIC3.34□□□□□ -1.87
NUBP1P53384 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NUBP1P53384 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NUBP1P53384 RNU6-1216P-201ENST00000362590 107 ntBASIC3.33□□□□□ -1.88
NUBP1P53384 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.33□□□□□ -1.88
NUBP1P53384 JTBP1-201ENST00000441314 247 ntBASIC3.33□□□□□ -1.88
NUBP1P53384 RN7SL20P-201ENST00000488827 297 ntBASIC3.33□□□□□ -1.88
NUBP1P53384 TRBV12-2-201ENST00000489763 344 ntBASIC3.33□□□□□ -1.88
NUBP1P53384 AC026333.2-201ENST00000542164 106 ntBASIC3.33□□□□□ -1.88
NUBP1P53384 MIR3140-201ENST00000583685 90 ntBASIC3.33□□□□□ -1.88
NUBP1P53384 AC013244.2-201ENST00000603396 103 ntBASIC3.33□□□□□ -1.88
NUBP1P53384 uc_338.6-201ENST00000613544 171 ntBASIC3.33□□□□□ -1.88
NUBP1P53384 MIR6516-201ENST00000630554 81 ntBASIC3.33□□□□□ -1.88
NUBP1P53384 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NUBP1P53384 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
NUBP1P53384 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NUBP1P53384 SNORA24B-201ENST00000384176 131 ntBASIC3.32□□□□□ -1.88
NUBP1P53384 SNORA7.4-201ENST00000384249 137 ntBASIC3.32□□□□□ -1.88
NUBP1P53384 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms