Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 SNORA31.17-201ENST00000516953 127 ntBASIC2.57□□□□□ -2
RNF144AP50876 MIR4796-201ENST00000580742 81 ntBASIC2.57□□□□□ -2
RNF144AP50876 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.57□□□□□ -2
RNF144AP50876 AC242498.1-201ENST00000604134 111 ntBASIC2.57□□□□□ -2
RNF144AP50876 Y_RNA.788-201ENST00000622394 112 ntBASIC2.57□□□□□ -2
RNF144AP50876 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.57□□□□□ -2
RNF144AP50876 AC006386.2-201ENST00000624491 75 ntBASIC2.57□□□□□ -2
RNF144AP50876 AC012005.1-201ENST00000624575 75 ntBASIC2.57□□□□□ -2
RNF144AP50876 U6.109-201ENST00000636749 87 ntBASIC2.57□□□□□ -2
RNF144AP50876 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.57□□□□□ -2
RNF144AP50876 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.57□□□□□ -2
RNF144AP50876 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.56□□□□□ -2
RNF144AP50876 RNU1-112P-201ENST00000364401 164 ntBASIC2.56□□□□□ -2
RNF144AP50876 RNU6-686P-201ENST00000364839 107 ntBASIC2.56□□□□□ -2
RNF144AP50876 RNU6-203P-201ENST00000384038 104 ntBASIC2.56□□□□□ -2
RNF144AP50876 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.56□□□□□ -2
RNF144AP50876 RNA5SP270-201ENST00000411361 118 ntBASIC2.56□□□□□ -2
RNF144AP50876 BX276092.1-201ENST00000427368 251 ntBASIC2.56□□□□□ -2
RNF144AP50876 RNU6-557P-201ENST00000516842 110 ntBASIC2.56□□□□□ -2
RNF144AP50876 MIR3605-201ENST00000583214 100 ntBASIC2.56□□□□□ -2
RNF144AP50876 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.56□□□□□ -2
RNF144AP50876 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.55□□□□□ -2
RNF144AP50876 SNORA63.2-201ENST00000362603 126 ntBASIC2.55□□□□□ -2
RNF144AP50876 RNU6-571P-201ENST00000384128 107 ntBASIC2.55□□□□□ -2
RNF144AP50876 SNORA72.6-201ENST00000384520 129 ntBASIC2.55□□□□□ -2
RNF144AP50876 MIR588-201ENST00000384900 83 ntBASIC2.55□□□□□ -2
RNF144AP50876 AL161722.3-201ENST00000605789 2983 ntBASIC2.55□□□□□ -2
RNF144AP50876 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
RNF144AP50876 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RNF144AP50876 MIRLET7A1-201ENST00000362295 80 ntBASIC2.54□□□□□ -2
RNF144AP50876 Y_RNA.119-201ENST00000363301 96 ntBASIC2.54□□□□□ -2
RNF144AP50876 MIR653-201ENST00000385279 96 ntBASIC2.54□□□□□ -2
RNF144AP50876 RNU6-523P-201ENST00000516304 54 ntBASIC2.54□□□□□ -2
RNF144AP50876 MIR4536-1-201ENST00000583537 88 ntBASIC2.54□□□□□ -2
RNF144AP50876 PRELID3BP2-201ENST00000605362 201 ntBASIC2.54□□□□□ -2
RNF144AP50876 RNU6-161P-201ENST00000363051 106 ntBASIC2.53□□□□□ -2
RNF144AP50876 RNA5SP48-201ENST00000363969 126 ntBASIC2.53□□□□□ -2
RNF144AP50876 SNORA67.1-201ENST00000364749 141 ntBASIC2.53□□□□□ -2
RNF144AP50876 RNU6-590P-201ENST00000365039 107 ntBASIC2.53□□□□□ -2
RNF144AP50876 MIR634-201ENST00000385208 97 ntBASIC2.53□□□□□ -2
RNF144AP50876 AC004965.1-201ENST00000413033 213 ntBASIC2.53□□□□□ -2
RNF144AP50876 SCARNA13-201ENST00000516672 275 ntBASIC2.53□□□□□ -2
RNF144AP50876 AL033523.1-201ENST00000605153 153 ntBASIC2.53□□□□□ -2
RNF144AP50876 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.53□□□□□ -2
RNF144AP50876 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.53□□□□□ -2
RNF144AP50876 WWP1P1-201ENST00000466609 2769 ntBASIC2.52□□□□□ -2.01
RNF144AP50876 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
RNF144AP50876 MIR26A1-201ENST00000362205 77 ntBASIC2.52□□□□□ -2.01
RNF144AP50876 SNORA25.9-201ENST00000365087 128 ntBASIC2.52□□□□□ -2.01
RNF144AP50876 RNU6-811P-201ENST00000384069 107 ntBASIC2.52□□□□□ -2.01
RNF144AP50876 COTL1P1-201ENST00000422309 375 ntBASIC2.52□□□□□ -2.01
RNF144AP50876 AC087499.2-201ENST00000432861 149 ntBASIC2.52□□□□□ -2.01
RNF144AP50876 SCARNA18B-201ENST00000458806 135 ntBASIC2.52□□□□□ -2.01
RNF144AP50876 SNORD111.1-201ENST00000516421 86 ntBASIC2.52□□□□□ -2.01
RNF144AP50876 MIR3134-201ENST00000579433 74 ntBASIC2.52□□□□□ -2.01
RNF144AP50876 AL096861.1-201ENST00000610899 123 ntBASIC2.52□□□□□ -2.01
RNF144AP50876 RNA5SP210-201ENST00000391034 120 ntBASIC2.51□□□□□ -2.01
RNF144AP50876 AL138827.1-201ENST00000402666 306 ntBASIC2.51□□□□□ -2.01
RNF144AP50876 RNU6-1108P-201ENST00000516308 104 ntBASIC2.51□□□□□ -2.01
RNF144AP50876 RNA5SP82-201ENST00000516707 92 ntBASIC2.51□□□□□ -2.01
RNF144AP50876 MIR3670-2-201ENST00000582974 65 ntBASIC2.51□□□□□ -2.01
RNF144AP50876 MIR3670-1-201ENST00000584160 65 ntBASIC2.51□□□□□ -2.01
RNF144AP50876 SNORA4-201ENST00000584302 138 ntBASIC2.51□□□□□ -2.01
RNF144AP50876 MIR3670-3-201ENST00000584855 65 ntBASIC2.51□□□□□ -2.01
RNF144AP50876 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.51□□□□□ -2.01
RNF144AP50876 MIR3670-4-201ENST00000612260 65 ntBASIC2.51□□□□□ -2.01
RNF144AP50876 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.51□□□□□ -2.01
RNF144AP50876 RNA5SP259-201ENST00000365541 109 ntBASIC2.5□□□□□ -2.01
RNF144AP50876 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.5□□□□□ -2.01
RNF144AP50876 Y_RNA.660-201ENST00000516002 120 ntBASIC2.5□□□□□ -2.01
RNF144AP50876 EIF4BP1-201ENST00000554881 351 ntBASIC2.5□□□□□ -2.01
RNF144AP50876 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.5□□□□□ -2.01
RNF144AP50876 MIR4635-201ENST00000583759 79 ntBASIC2.5□□□□□ -2.01
RNF144AP50876 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
RNF144AP50876 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
RNF144AP50876 RNU6-411P-201ENST00000384451 107 ntBASIC2.49□□□□□ -2.01
RNF144AP50876 MIR194-1-201ENST00000384892 85 ntBASIC2.49□□□□□ -2.01
RNF144AP50876 MIR524-201ENST00000385242 87 ntBASIC2.49□□□□□ -2.01
RNF144AP50876 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
RNF144AP50876 RNA5SP292-201ENST00000390974 118 ntBASIC2.49□□□□□ -2.01
RNF144AP50876 SNORA40.18-201ENST00000391200 128 ntBASIC2.49□□□□□ -2.01
RNF144AP50876 HSPE1P24-201ENST00000450782 238 ntBASIC2.49□□□□□ -2.01
RNF144AP50876 FGF7P7-201ENST00000514120 227 ntBASIC2.49□□□□□ -2.01
RNF144AP50876 SNORA18.5-201ENST00000516616 101 ntBASIC2.49□□□□□ -2.01
RNF144AP50876 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RNF144AP50876 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
RNF144AP50876 RNU6-396P-201ENST00000365369 105 ntBASIC2.48□□□□□ -2.01
RNF144AP50876 MIR516A2-201ENST00000384888 90 ntBASIC2.48□□□□□ -2.01
RNF144AP50876 MIR516A1-201ENST00000385033 90 ntBASIC2.48□□□□□ -2.01
RNF144AP50876 MIR563-201ENST00000385080 79 ntBASIC2.48□□□□□ -2.01
RNF144AP50876 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
RNF144AP50876 RNU6-243P-201ENST00000391140 107 ntBASIC2.48□□□□□ -2.01
RNF144AP50876 RNU6-1254P-201ENST00000391266 104 ntBASIC2.48□□□□□ -2.01
RNF144AP50876 RNA5SP450-201ENST00000411206 102 ntBASIC2.48□□□□□ -2.01
RNF144AP50876 MIR7106-201ENST00000612419 65 ntBASIC2.48□□□□□ -2.01
RNF144AP50876 MIR6740-201ENST00000618268 113 ntBASIC2.48□□□□□ -2.01
RNF144AP50876 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.48□□□□□ -2.01
RNF144AP50876 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
RNF144AP50876 SNORD36A-201ENST00000362874 73 ntBASIC2.47□□□□□ -2.01
RNF144AP50876 AC005908.1-201ENST00000468701 347 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms