Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 RNU6-349P-201ENST00000362402 107 ntBASIC0.2□□□□□ -2.38
PTPN6P29350 RNA5SP257-201ENST00000363023 116 ntBASIC0.2□□□□□ -2.38
PTPN6P29350 RNA5SP62-201ENST00000363457 110 ntBASIC0.2□□□□□ -2.38
PTPN6P29350 SNORD118-201ENST00000363593 134 ntBASIC0.2□□□□□ -2.38
PTPN6P29350 RNU6-728P-201ENST00000365375 104 ntBASIC0.2□□□□□ -2.38
PTPN6P29350 RNU6-1109P-201ENST00000391187 107 ntBASIC0.2□□□□□ -2.38
PTPN6P29350 RNA5SP63-201ENST00000391225 112 ntBASIC0.2□□□□□ -2.38
PTPN6P29350 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.2□□□□□ -2.38
PTPN6P29350 RNU7-70P-201ENST00000516941 66 ntBASIC0.2□□□□□ -2.38
PTPN6P29350 AC133485.4-201ENST00000561835 220 ntBASIC0.2□□□□□ -2.38
PTPN6P29350 AL365265.1-201ENST00000621045 234 ntBASIC0.2□□□□□ -2.38
PTPN6P29350 AC091932.4-201ENST00000623386 200 ntBASIC0.2□□□□□ -2.38
PTPN6P29350 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.2□□□□□ -2.38
PTPN6P29350 MIR376A2-201ENST00000636782 80 ntBASIC0.2□□□□□ -2.38
PTPN6P29350 RNU6-403P-201ENST00000363163 104 ntBASIC0.19□□□□□ -2.38
PTPN6P29350 Y_RNA.251-201ENST00000364551 99 ntBASIC0.19□□□□□ -2.38
PTPN6P29350 Y_RNA.430-201ENST00000384081 110 ntBASIC0.19□□□□□ -2.38
PTPN6P29350 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.19□□□□□ -2.38
PTPN6P29350 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.19□□□□□ -2.38
PTPN6P29350 RNU6-797P-201ENST00000363101 109 ntBASIC0.18□□□□□ -2.38
PTPN6P29350 Y_RNA.176-201ENST00000363815 109 ntBASIC0.18□□□□□ -2.38
PTPN6P29350 AL442663.2-201ENST00000554385 511 ntBASIC0.18□□□□□ -2.38
PTPN6P29350 AC044792.1-201ENST00000593294 196 ntBASIC0.18□□□□□ -2.38
PTPN6P29350 MIR2909-201ENST00000617113 69 ntBASIC0.18□□□□□ -2.38
PTPN6P29350 MIR8066-201ENST00000617280 78 ntBASIC0.18□□□□□ -2.38
PTPN6P29350 U6.104-201ENST00000637979 90 ntBASIC0.18□□□□□ -2.38
PTPN6P29350 MIR335-201ENST00000362173 94 ntBASIC0.17□□□□□ -2.38
PTPN6P29350 Y_RNA.42-201ENST00000362660 108 ntBASIC0.17□□□□□ -2.38
PTPN6P29350 RNU4-17P-201ENST00000365598 141 ntBASIC0.17□□□□□ -2.38
PTPN6P29350 RNU6-1292P-201ENST00000383856 107 ntBASIC0.17□□□□□ -2.38
PTPN6P29350 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.17□□□□□ -2.38
PTPN6P29350 RNU6-381P-201ENST00000391259 108 ntBASIC0.17□□□□□ -2.38
PTPN6P29350 Y_RNA.617-201ENST00000410920 90 ntBASIC0.17□□□□□ -2.38
PTPN6P29350 SEPT7P4-201ENST00000437076 306 ntBASIC0.17□□□□□ -2.38
PTPN6P29350 Y_RNA.701-201ENST00000516812 110 ntBASIC0.17□□□□□ -2.38
PTPN6P29350 AP003327.1-201ENST00000529684 127 ntBASIC0.17□□□□□ -2.38
PTPN6P29350 Y_RNA.13-201ENST00000362403 112 ntBASIC0.16□□□□□ -2.38
PTPN6P29350 RNU6-597P-201ENST00000365620 102 ntBASIC0.16□□□□□ -2.38
PTPN6P29350 Y_RNA.416-201ENST00000384014 113 ntBASIC0.16□□□□□ -2.38
PTPN6P29350 Y_RNA.512-201ENST00000384518 102 ntBASIC0.16□□□□□ -2.38
PTPN6P29350 MIR644A-201ENST00000385262 94 ntBASIC0.16□□□□□ -2.38
PTPN6P29350 MIR1302-6-201ENST00000408466 90 ntBASIC0.16□□□□□ -2.38
PTPN6P29350 AL512326.2-201ENST00000426359 151 ntBASIC0.16□□□□□ -2.38
PTPN6P29350 AC073261.1-201ENST00000429409 121 ntBASIC0.16□□□□□ -2.38
PTPN6P29350 RNU6-863P-201ENST00000515989 104 ntBASIC0.16□□□□□ -2.38
PTPN6P29350 RNU6-561P-201ENST00000516222 102 ntBASIC0.16□□□□□ -2.38
PTPN6P29350 RNU6-635P-201ENST00000516651 102 ntBASIC0.16□□□□□ -2.38
PTPN6P29350 MIR4282-201ENST00000583613 67 ntBASIC0.16□□□□□ -2.38
PTPN6P29350 MIR6718-201ENST00000616153 80 ntBASIC0.16□□□□□ -2.38
PTPN6P29350 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
PTPN6P29350 RNU6-1099P-201ENST00000363533 107 ntBASIC0.15□□□□□ -2.39
PTPN6P29350 U8.15-201ENST00000390947 134 ntBASIC0.15□□□□□ -2.39
PTPN6P29350 RNA5SP299-201ENST00000391203 116 ntBASIC0.15□□□□□ -2.39
PTPN6P29350 AC141846.1-201ENST00000568348 142 ntBASIC0.15□□□□□ -2.39
PTPN6P29350 AL365205.2-201ENST00000594586 68 ntBASIC0.15□□□□□ -2.39
PTPN6P29350 MIR6082-201ENST00000613604 109 ntBASIC0.15□□□□□ -2.39
PTPN6P29350 SNORA22.1-201ENST00000362701 134 ntBASIC0.14□□□□□ -2.39
PTPN6P29350 RNU6-238P-201ENST00000363313 106 ntBASIC0.14□□□□□ -2.39
PTPN6P29350 Y_RNA.262-201ENST00000364641 102 ntBASIC0.14□□□□□ -2.39
PTPN6P29350 MIR1295A-201ENST00000408463 79 ntBASIC0.14□□□□□ -2.39
PTPN6P29350 MTCYBP6-201ENST00000441810 138 ntBASIC0.14□□□□□ -2.39
PTPN6P29350 AC078938.1-201ENST00000620993 318 ntBASIC0.14□□□□□ -2.39
PTPN6P29350 AC021613.1-201ENST00000623880 111 ntBASIC0.14□□□□□ -2.39
PTPN6P29350 SNORA36.1-201ENST00000363424 132 ntBASIC0.13□□□□□ -2.39
PTPN6P29350 RNU6-103P-201ENST00000363686 107 ntBASIC0.13□□□□□ -2.39
PTPN6P29350 Y_RNA.476-201ENST00000384347 108 ntBASIC0.13□□□□□ -2.39
PTPN6P29350 SNORA72.6-201ENST00000384520 129 ntBASIC0.13□□□□□ -2.39
PTPN6P29350 RNU4-43P-201ENST00000410628 137 ntBASIC0.13□□□□□ -2.39
PTPN6P29350 AL121914.1-201ENST00000450188 156 ntBASIC0.13□□□□□ -2.39
PTPN6P29350 SNORD116-25-201ENST00000516517 92 ntBASIC0.13□□□□□ -2.39
PTPN6P29350 RNA5SP268-201ENST00000516828 124 ntBASIC0.13□□□□□ -2.39
PTPN6P29350 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.13□□□□□ -2.39
PTPN6P29350 MIR4431-201ENST00000579990 94 ntBASIC0.13□□□□□ -2.39
PTPN6P29350 Y_RNA.174-201ENST00000363781 105 ntBASIC0.12□□□□□ -2.39
PTPN6P29350 RNU6-815P-201ENST00000384080 113 ntBASIC0.12□□□□□ -2.39
PTPN6P29350 Y_RNA.461-201ENST00000384263 103 ntBASIC0.12□□□□□ -2.39
PTPN6P29350 RNU2-59P-201ENST00000410482 191 ntBASIC0.12□□□□□ -2.39
PTPN6P29350 Y_RNA.681-201ENST00000516445 113 ntBASIC0.12□□□□□ -2.39
PTPN6P29350 RNU6-765P-201ENST00000516916 99 ntBASIC0.12□□□□□ -2.39
PTPN6P29350 MIR4491-201ENST00000581087 68 ntBASIC0.12□□□□□ -2.39
PTPN6P29350 MIR8062-201ENST00000621515 85 ntBASIC0.12□□□□□ -2.39
PTPN6P29350 Y_RNA.483-201ENST00000384380 101 ntBASIC0.11□□□□□ -2.39
PTPN6P29350 Y_RNA.588-201ENST00000391254 102 ntBASIC0.11□□□□□ -2.39
PTPN6P29350 RNU6-135P-201ENST00000516769 101 ntBASIC0.11□□□□□ -2.39
PTPN6P29350 AC069113.3-201ENST00000521019 150 ntBASIC0.11□□□□□ -2.39
PTPN6P29350 AC112693.2-201ENST00000556538 232 ntBASIC0.11□□□□□ -2.39
PTPN6P29350 MIR4315-1-201ENST00000636800 73 ntBASIC0.11□□□□□ -2.39
PTPN6P29350 MIR6841-201ENST00000637129 72 ntBASIC0.11□□□□□ -2.39
PTPN6P29350 MIR4315-2-201ENST00000640925 73 ntBASIC0.11□□□□□ -2.39
PTPN6P29350 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.1□□□□□ -2.39
PTPN6P29350 Y_RNA.32-201ENST00000362589 110 ntBASIC0.1□□□□□ -2.39
PTPN6P29350 Y_RNA.54-201ENST00000362766 105 ntBASIC0.1□□□□□ -2.39
PTPN6P29350 RNU6-1229P-201ENST00000364295 107 ntBASIC0.1□□□□□ -2.39
PTPN6P29350 RNU6-1227P-201ENST00000383981 107 ntBASIC0.1□□□□□ -2.39
PTPN6P29350 RNU6-949P-201ENST00000384040 107 ntBASIC0.1□□□□□ -2.39
PTPN6P29350 Y_RNA.422-201ENST00000384054 114 ntBASIC0.1□□□□□ -2.39
PTPN6P29350 SNORA18-201ENST00000384416 132 ntBASIC0.1□□□□□ -2.39
PTPN6P29350 Y_RNA.515-201ENST00000384535 112 ntBASIC0.1□□□□□ -2.39
PTPN6P29350 MT-TW-201ENST00000387382 68 ntBASIC0.1□□□□□ -2.39
PTPN6P29350 RNU5E-9P-201ENST00000411164 104 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms