Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 RNA5SP147-201ENST00000516493 109 ntBASIC2.22□□□□□ -2.05
PAX4O43316 RNU6-531P-201ENST00000516694 104 ntBASIC2.22□□□□□ -2.05
PAX4O43316 MIR2682-201ENST00000580305 110 ntBASIC2.22□□□□□ -2.05
PAX4O43316 MIR3920-201ENST00000581751 86 ntBASIC2.22□□□□□ -2.05
PAX4O43316 uc_338.6-201ENST00000613544 171 ntBASIC2.22□□□□□ -2.05
PAX4O43316 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
PAX4O43316 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
PAX4O43316 RNU6-664P-201ENST00000362381 107 ntBASIC2.21□□□□□ -2.06
PAX4O43316 Y_RNA.239-201ENST00000364444 113 ntBASIC2.21□□□□□ -2.06
PAX4O43316 RNU6-1031P-201ENST00000384773 107 ntBASIC2.21□□□□□ -2.06
PAX4O43316 AL034345.1-201ENST00000407768 123 ntBASIC2.21□□□□□ -2.06
PAX4O43316 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.21□□□□□ -2.06
PAX4O43316 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.21□□□□□ -2.06
PAX4O43316 SCARNA16.3-201ENST00000516595 184 ntBASIC2.21□□□□□ -2.06
PAX4O43316 GTF3AP2-201ENST00000557014 266 ntBASIC2.21□□□□□ -2.06
PAX4O43316 SCARNA4.1-201ENST00000628597 123 ntBASIC2.21□□□□□ -2.06
PAX4O43316 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
PAX4O43316 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.21□□□□□ -2.06
PAX4O43316 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
PAX4O43316 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
PAX4O43316 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
PAX4O43316 RNU6-668P-201ENST00000364180 107 ntBASIC2.2□□□□□ -2.06
PAX4O43316 RNU6-461P-201ENST00000364195 107 ntBASIC2.2□□□□□ -2.06
PAX4O43316 SNORD38B-201ENST00000384690 67 ntBASIC2.2□□□□□ -2.06
PAX4O43316 RNA5SP274-201ENST00000410484 108 ntBASIC2.2□□□□□ -2.06
PAX4O43316 RPL23AP83-201ENST00000434984 473 ntBASIC2.2□□□□□ -2.06
PAX4O43316 AC011753.1-201ENST00000451001 220 ntBASIC2.2□□□□□ -2.06
PAX4O43316 CKS1BP2-201ENST00000497342 240 ntBASIC2.2□□□□□ -2.06
PAX4O43316 SNORA25.16-201ENST00000516741 121 ntBASIC2.2□□□□□ -2.06
PAX4O43316 Y_RNA.697-201ENST00000516776 113 ntBASIC2.2□□□□□ -2.06
PAX4O43316 RNU6-122P-201ENST00000516818 107 ntBASIC2.2□□□□□ -2.06
PAX4O43316 SCARNA11.3-201ENST00000517276 130 ntBASIC2.2□□□□□ -2.06
PAX4O43316 AC019176.1-201ENST00000518519 225 ntBASIC2.2□□□□□ -2.06
PAX4O43316 AC121758.2-201ENST00000553271 193 ntBASIC2.2□□□□□ -2.06
PAX4O43316 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.2□□□□□ -2.06
PAX4O43316 MIR7112-201ENST00000616126 65 ntBASIC2.2□□□□□ -2.06
PAX4O43316 AC007318.2-201ENST00000620999 243 ntBASIC2.2□□□□□ -2.06
PAX4O43316 SNORD38B-202ENST00000625943 69 ntBASIC2.2□□□□□ -2.06
PAX4O43316 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
PAX4O43316 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
PAX4O43316 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
PAX4O43316 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.19□□□□□ -2.06
PAX4O43316 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
PAX4O43316 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
PAX4O43316 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.19□□□□□ -2.06
PAX4O43316 SNORD46.1-201ENST00000364139 104 ntBASIC2.19□□□□□ -2.06
PAX4O43316 SNORD56.5-201ENST00000364281 72 ntBASIC2.19□□□□□ -2.06
PAX4O43316 RNU6-654P-201ENST00000364373 107 ntBASIC2.19□□□□□ -2.06
PAX4O43316 RNA5SP299-201ENST00000391203 116 ntBASIC2.19□□□□□ -2.06
PAX4O43316 SNORA11-201ENST00000408789 128 ntBASIC2.19□□□□□ -2.06
PAX4O43316 RNA5SP344-201ENST00000411081 104 ntBASIC2.19□□□□□ -2.06
PAX4O43316 AC244098.3-201ENST00000424803 96 ntBASIC2.19□□□□□ -2.06
PAX4O43316 MICF-203ENST00000432679 129 ntBASIC2.19□□□□□ -2.06
PAX4O43316 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.19□□□□□ -2.06
PAX4O43316 UBBP3-201ENST00000445497 241 ntBASIC2.19□□□□□ -2.06
PAX4O43316 UQCRHP3-201ENST00000451503 251 ntBASIC2.19□□□□□ -2.06
PAX4O43316 snoU13.2-201ENST00000459201 104 ntBASIC2.19□□□□□ -2.06
PAX4O43316 AL355297.2-201ENST00000604792 129 ntBASIC2.19□□□□□ -2.06
PAX4O43316 MIR6740-201ENST00000618268 113 ntBASIC2.19□□□□□ -2.06
PAX4O43316 MIR622-201ENST00000638396 96 ntBASIC2.19□□□□□ -2.06
PAX4O43316 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
PAX4O43316 MIR30D-201ENST00000362283 70 ntBASIC2.18□□□□□ -2.06
PAX4O43316 RNY4P3-201ENST00000365254 95 ntBASIC2.18□□□□□ -2.06
PAX4O43316 SNORA25B-201ENST00000365507 128 ntBASIC2.18□□□□□ -2.06
PAX4O43316 SNORD101-201ENST00000384027 73 ntBASIC2.18□□□□□ -2.06
PAX4O43316 RPS27P16-201ENST00000425758 201 ntBASIC2.18□□□□□ -2.06
PAX4O43316 AL139132.1-201ENST00000431587 344 ntBASIC2.18□□□□□ -2.06
PAX4O43316 RPL23AP42-201ENST00000471152 471 ntBASIC2.18□□□□□ -2.06
PAX4O43316 AC099513.1-201ENST00000490423 301 ntBASIC2.18□□□□□ -2.06
PAX4O43316 RNU7-41P-201ENST00000515917 61 ntBASIC2.18□□□□□ -2.06
PAX4O43316 RNU1-143P-201ENST00000516296 146 ntBASIC2.18□□□□□ -2.06
PAX4O43316 RNU6-980P-201ENST00000516925 103 ntBASIC2.18□□□□□ -2.06
PAX4O43316 UBL5P2-201ENST00000583788 219 ntBASIC2.18□□□□□ -2.06
PAX4O43316 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.18□□□□□ -2.06
PAX4O43316 U1.23-201ENST00000610293 146 ntBASIC2.18□□□□□ -2.06
PAX4O43316 AC021506.2-201ENST00000612354 169 ntBASIC2.18□□□□□ -2.06
PAX4O43316 RNU1-68P-201ENST00000615382 146 ntBASIC2.18□□□□□ -2.06
PAX4O43316 U1.39-201ENST00000621562 146 ntBASIC2.18□□□□□ -2.06
PAX4O43316 AC110079.1-202ENST00000635213 138 ntBASIC2.18□□□□□ -2.06
PAX4O43316 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
PAX4O43316 SNORD60.1-201ENST00000362451 73 ntBASIC2.17□□□□□ -2.06
PAX4O43316 RNU1-105P-201ENST00000363470 161 ntBASIC2.17□□□□□ -2.06
PAX4O43316 RNU1-109P-201ENST00000383960 147 ntBASIC2.17□□□□□ -2.06
PAX4O43316 SNORA7.4-201ENST00000384249 137 ntBASIC2.17□□□□□ -2.06
PAX4O43316 Y_RNA.510-201ENST00000384511 114 ntBASIC2.17□□□□□ -2.06
PAX4O43316 MIR588-201ENST00000384900 83 ntBASIC2.17□□□□□ -2.06
PAX4O43316 MIR563-201ENST00000385080 79 ntBASIC2.17□□□□□ -2.06
PAX4O43316 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.17□□□□□ -2.06
PAX4O43316 AC022018.1-201ENST00000430685 241 ntBASIC2.17□□□□□ -2.06
PAX4O43316 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.17□□□□□ -2.06
PAX4O43316 SCARNA20.6-201ENST00000517251 106 ntBASIC2.17□□□□□ -2.06
PAX4O43316 MIR5094-201ENST00000578766 85 ntBASIC2.17□□□□□ -2.06
PAX4O43316 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PAX4O43316 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
PAX4O43316 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
PAX4O43316 RNU6-23P-201ENST00000363283 107 ntBASIC2.16□□□□□ -2.06
PAX4O43316 SNORA46-201ENST00000384762 135 ntBASIC2.16□□□□□ -2.06
PAX4O43316 MIR203A-201ENST00000384836 110 ntBASIC2.16□□□□□ -2.06
PAX4O43316 MIR451A-201ENST00000385059 72 ntBASIC2.16□□□□□ -2.06
PAX4O43316 SNORD67-201ENST00000390833 111 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 196.4 ms