Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RNF223E7ERA6 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.97
RNF223E7ERA6 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.71□□□□□ -1.98
RNF223E7ERA6 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
RNF223E7ERA6 MT-TN-201ENST00000387400 73 ntBASIC2.71□□□□□ -1.98
RNF223E7ERA6 U8.13-201ENST00000390842 128 ntBASIC2.71□□□□□ -1.98
RNF223E7ERA6 MIR548H5-201ENST00000580314 60 ntBASIC2.71□□□□□ -1.98
RNF223E7ERA6 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.71□□□□□ -1.98
RNF223E7ERA6 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC2.71□□□□□ -1.98
RNF223E7ERA6 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
RNF223E7ERA6 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
RNF223E7ERA6 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
RNF223E7ERA6 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
RNF223E7ERA6 RNU6-829P-201ENST00000363700 112 ntBASIC2.7□□□□□ -1.98
RNF223E7ERA6 Y_RNA.236-201ENST00000364427 111 ntBASIC2.7□□□□□ -1.98
RNF223E7ERA6 MIR184-201ENST00000384962 84 ntBASIC2.7□□□□□ -1.98
RNF223E7ERA6 RNU6-360P-201ENST00000390944 104 ntBASIC2.7□□□□□ -1.98
RNF223E7ERA6 ARF4P2-201ENST00000430209 526 ntBASIC2.7□□□□□ -1.98
RNF223E7ERA6 AL139132.1-201ENST00000431587 344 ntBASIC2.7□□□□□ -1.98
RNF223E7ERA6 RN7SL429P-201ENST00000479090 223 ntBASIC2.7□□□□□ -1.98
RNF223E7ERA6 RN7SL489P-201ENST00000486185 223 ntBASIC2.7□□□□□ -1.98
RNF223E7ERA6 RN7SL327P-201ENST00000488659 223 ntBASIC2.7□□□□□ -1.98
RNF223E7ERA6 AC008885.1-201ENST00000514930 301 ntBASIC2.7□□□□□ -1.98
RNF223E7ERA6 GTF3AP2-201ENST00000557014 266 ntBASIC2.7□□□□□ -1.98
RNF223E7ERA6 MTRNR2L2-201ENST00000604882 87 ntBASIC2.7□□□□□ -1.98
RNF223E7ERA6 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.7□□□□□ -1.98
RNF223E7ERA6 RN7SL853P-201ENST00000617250 223 ntBASIC2.7□□□□□ -1.98
RNF223E7ERA6 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
RNF223E7ERA6 U6.100-201ENST00000636230 99 ntBASIC2.7□□□□□ -1.98
RNF223E7ERA6 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
RNF223E7ERA6 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RNF223E7ERA6 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.69□□□□□ -1.98
RNF223E7ERA6 AC073325.2-201ENST00000339545 159 ntBASIC2.69□□□□□ -1.98
RNF223E7ERA6 MIR101-2-201ENST00000362195 79 ntBASIC2.69□□□□□ -1.98
RNF223E7ERA6 RNU6-301P-201ENST00000384277 107 ntBASIC2.69□□□□□ -1.98
RNF223E7ERA6 AC022018.1-201ENST00000430685 241 ntBASIC2.69□□□□□ -1.98
RNF223E7ERA6 RPL30P7-201ENST00000479312 323 ntBASIC2.69□□□□□ -1.98
RNF223E7ERA6 MIR3192-201ENST00000584920 77 ntBASIC2.69□□□□□ -1.98
RNF223E7ERA6 AC007318.2-201ENST00000620999 243 ntBASIC2.69□□□□□ -1.98
RNF223E7ERA6 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.68□□□□□ -1.98
RNF223E7ERA6 RNU6-1187P-201ENST00000364771 110 ntBASIC2.68□□□□□ -1.98
RNF223E7ERA6 RNU6-203P-201ENST00000384038 104 ntBASIC2.68□□□□□ -1.98
RNF223E7ERA6 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.68□□□□□ -1.98
RNF223E7ERA6 SNORD93-201ENST00000408813 74 ntBASIC2.68□□□□□ -1.98
RNF223E7ERA6 AC003982.1-202ENST00000469928 248 ntBASIC2.68□□□□□ -1.98
RNF223E7ERA6 MIR2115-201ENST00000516657 100 ntBASIC2.68□□□□□ -1.98
RNF223E7ERA6 MIR4425-201ENST00000580572 84 ntBASIC2.68□□□□□ -1.98
RNF223E7ERA6 uc_338.6-201ENST00000613544 171 ntBASIC2.68□□□□□ -1.98
RNF223E7ERA6 AL109933.3-201ENST00000619095 188 ntBASIC2.68□□□□□ -1.98
RNF223E7ERA6 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RNF223E7ERA6 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RNF223E7ERA6 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
RNF223E7ERA6 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RNF223E7ERA6 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
RNF223E7ERA6 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RNF223E7ERA6 AC131280.1-202ENST00000624067 4211 ntBASIC2.67□□□□□ -1.98
RNF223E7ERA6 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RNF223E7ERA6 SNORA25.3-201ENST00000363205 127 ntBASIC2.67□□□□□ -1.98
RNF223E7ERA6 RNU1-51P-201ENST00000365345 176 ntBASIC2.67□□□□□ -1.98
RNF223E7ERA6 RNU6-935P-201ENST00000410371 100 ntBASIC2.67□□□□□ -1.98
RNF223E7ERA6 RNA5SP344-201ENST00000411081 104 ntBASIC2.67□□□□□ -1.98
RNF223E7ERA6 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.67□□□□□ -1.98
RNF223E7ERA6 AC092427.1-202ENST00000430569 476 ntBASIC2.67□□□□□ -1.98
RNF223E7ERA6 MIR4644-201ENST00000579929 84 ntBASIC2.67□□□□□ -1.98
RNF223E7ERA6 MIR4672-201ENST00000583126 81 ntBASIC2.67□□□□□ -1.98
RNF223E7ERA6 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.67□□□□□ -1.98
RNF223E7ERA6 uc_338.1-201ENST00000612113 180 ntBASIC2.67□□□□□ -1.98
RNF223E7ERA6 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.67□□□□□ -1.98
RNF223E7ERA6 U1.36-201ENST00000620684 176 ntBASIC2.67□□□□□ -1.98
RNF223E7ERA6 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.67□□□□□ -1.98
RNF223E7ERA6 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
RNF223E7ERA6 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RNF223E7ERA6 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
RNF223E7ERA6 MIR449A-201ENST00000362113 91 ntBASIC2.66□□□□□ -1.98
RNF223E7ERA6 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.66□□□□□ -1.98
RNF223E7ERA6 RNA5SP100-201ENST00000410903 110 ntBASIC2.66□□□□□ -1.98
RNF223E7ERA6 RNA5SP59-201ENST00000410922 110 ntBASIC2.66□□□□□ -1.98
RNF223E7ERA6 AC004965.1-201ENST00000413033 213 ntBASIC2.66□□□□□ -1.98
RNF223E7ERA6 AL691482.2-201ENST00000457453 84 ntBASIC2.66□□□□□ -1.98
RNF223E7ERA6 RNU6-752P-201ENST00000516376 102 ntBASIC2.66□□□□□ -1.98
RNF223E7ERA6 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.66□□□□□ -1.98
RNF223E7ERA6 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.66□□□□□ -1.98
RNF223E7ERA6 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.66□□□□□ -1.98
RNF223E7ERA6 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.98
RNF223E7ERA6 Y_RNA.56-201ENST00000362798 112 ntBASIC2.65□□□□□ -1.99
RNF223E7ERA6 SNORA71.1-201ENST00000364523 117 ntBASIC2.65□□□□□ -1.99
RNF223E7ERA6 RNA5SP126-201ENST00000365092 109 ntBASIC2.65□□□□□ -1.99
RNF223E7ERA6 MIR194-1-201ENST00000384892 85 ntBASIC2.65□□□□□ -1.99
RNF223E7ERA6 MIR2682-201ENST00000580305 110 ntBASIC2.65□□□□□ -1.99
RNF223E7ERA6 AC016717.2-201ENST00000609089 5141 ntBASIC2.65□□□□□ -1.99
RNF223E7ERA6 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
RNF223E7ERA6 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
RNF223E7ERA6 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
RNF223E7ERA6 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RNF223E7ERA6 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC2.64□□□□□ -1.99
RNF223E7ERA6 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
RNF223E7ERA6 RNU6-403P-201ENST00000363163 104 ntBASIC2.64□□□□□ -1.99
RNF223E7ERA6 RNU1-36P-201ENST00000365130 165 ntBASIC2.64□□□□□ -1.99
RNF223E7ERA6 SNORA7.4-201ENST00000384249 137 ntBASIC2.64□□□□□ -1.99
RNF223E7ERA6 MIR451A-201ENST00000385059 72 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms