Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
RCCD1A6NED2 RNU6-396P-201ENST00000365369 105 ntBASIC2.89□□□□□ -1.95
RCCD1A6NED2 AC009487.2-201ENST00000420969 6821 ntBASIC2.89□□□□□ -1.95
RCCD1A6NED2 AL139132.1-201ENST00000431587 344 ntBASIC2.89□□□□□ -1.95
RCCD1A6NED2 AC023790.1-201ENST00000482174 347 ntBASIC2.89□□□□□ -1.95
RCCD1A6NED2 FGF7P7-201ENST00000514120 227 ntBASIC2.89□□□□□ -1.95
RCCD1A6NED2 AL357312.1-201ENST00000603879 298 ntBASIC2.89□□□□□ -1.95
RCCD1A6NED2 AC067747.1-201ENST00000608026 250 ntBASIC2.89□□□□□ -1.95
RCCD1A6NED2 Y_RNA.788-201ENST00000622394 112 ntBASIC2.89□□□□□ -1.95
RCCD1A6NED2 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.89□□□□□ -1.95
RCCD1A6NED2 AC008163.1-202ENST00000636004 2889 ntBASIC2.89□□□□□ -1.95
RCCD1A6NED2 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
RCCD1A6NED2 RNU1-112P-201ENST00000364401 164 ntBASIC2.88□□□□□ -1.95
RCCD1A6NED2 RNA5SP259-201ENST00000365541 109 ntBASIC2.88□□□□□ -1.95
RCCD1A6NED2 RNU6-851P-201ENST00000384565 107 ntBASIC2.88□□□□□ -1.95
RCCD1A6NED2 MIR634-201ENST00000385208 97 ntBASIC2.88□□□□□ -1.95
RCCD1A6NED2 SNORA40.18-201ENST00000391200 128 ntBASIC2.88□□□□□ -1.95
RCCD1A6NED2 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.88□□□□□ -1.95
RCCD1A6NED2 AC121758.2-201ENST00000553271 193 ntBASIC2.88□□□□□ -1.95
RCCD1A6NED2 MIR4529-201ENST00000578110 78 ntBASIC2.88□□□□□ -1.95
RCCD1A6NED2 U8.9-201ENST00000365667 134 ntBASIC2.87□□□□□ -1.95
RCCD1A6NED2 RNA5SP210-201ENST00000391034 120 ntBASIC2.87□□□□□ -1.95
RCCD1A6NED2 AC022018.1-201ENST00000430685 241 ntBASIC2.87□□□□□ -1.95
RCCD1A6NED2 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.87□□□□□ -1.95
RCCD1A6NED2 AC079600.2-201ENST00000550076 130 ntBASIC2.87□□□□□ -1.95
RCCD1A6NED2 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.87□□□□□ -1.95
RCCD1A6NED2 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RCCD1A6NED2 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.86□□□□□ -1.95
RCCD1A6NED2 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
RCCD1A6NED2 RNU6-161P-201ENST00000363051 106 ntBASIC2.86□□□□□ -1.95
RCCD1A6NED2 RNU6-411P-201ENST00000384451 107 ntBASIC2.86□□□□□ -1.95
RCCD1A6NED2 MIR513A1-201ENST00000385138 129 ntBASIC2.86□□□□□ -1.95
RCCD1A6NED2 RNU6-243P-201ENST00000391140 107 ntBASIC2.86□□□□□ -1.95
RCCD1A6NED2 RNU6-1254P-201ENST00000391266 104 ntBASIC2.86□□□□□ -1.95
RCCD1A6NED2 SNORA31.25-201ENST00000517242 134 ntBASIC2.86□□□□□ -1.95
RCCD1A6NED2 MIR4264-201ENST00000583520 66 ntBASIC2.86□□□□□ -1.95
RCCD1A6NED2 AP000942.3-201ENST00000603702 160 ntBASIC2.86□□□□□ -1.95
RCCD1A6NED2 MIR6740-201ENST00000618268 113 ntBASIC2.86□□□□□ -1.95
RCCD1A6NED2 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RCCD1A6NED2 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.85□□□□□ -1.95
RCCD1A6NED2 MIR30D-201ENST00000362283 70 ntBASIC2.85□□□□□ -1.95
RCCD1A6NED2 SNORD36A-201ENST00000362874 73 ntBASIC2.85□□□□□ -1.95
RCCD1A6NED2 COTL1P1-201ENST00000422309 375 ntBASIC2.85□□□□□ -1.95
RCCD1A6NED2 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RCCD1A6NED2 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
RCCD1A6NED2 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
RCCD1A6NED2 SNORD41-201ENST00000386967 70 ntBASIC2.84□□□□□ -1.95
RCCD1A6NED2 MIR887-201ENST00000401258 79 ntBASIC2.84□□□□□ -1.95
RCCD1A6NED2 RNU6-1165P-201ENST00000410119 107 ntBASIC2.84□□□□□ -1.95
RCCD1A6NED2 HSPE1P24-201ENST00000450782 238 ntBASIC2.84□□□□□ -1.95
RCCD1A6NED2 SCARNA18B-201ENST00000458806 135 ntBASIC2.84□□□□□ -1.95
RCCD1A6NED2 AC005908.1-201ENST00000468701 347 ntBASIC2.84□□□□□ -1.95
RCCD1A6NED2 RNU6-1108P-201ENST00000516308 104 ntBASIC2.84□□□□□ -1.95
RCCD1A6NED2 SNORA18.5-201ENST00000516616 101 ntBASIC2.84□□□□□ -1.95
RCCD1A6NED2 MIR3134-201ENST00000579433 74 ntBASIC2.84□□□□□ -1.95
RCCD1A6NED2 MIR4635-201ENST00000583759 79 ntBASIC2.84□□□□□ -1.95
RCCD1A6NED2 MIR3192-201ENST00000584920 77 ntBASIC2.84□□□□□ -1.95
RCCD1A6NED2 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
RCCD1A6NED2 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
RCCD1A6NED2 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RCCD1A6NED2 SNORA44-201ENST00000384584 132 ntBASIC2.83□□□□□ -1.96
RCCD1A6NED2 MIR516A2-201ENST00000384888 90 ntBASIC2.83□□□□□ -1.96
RCCD1A6NED2 MIR516A1-201ENST00000385033 90 ntBASIC2.83□□□□□ -1.96
RCCD1A6NED2 RNA5SP292-201ENST00000390974 118 ntBASIC2.83□□□□□ -1.96
RCCD1A6NED2 AL138827.1-201ENST00000402666 306 ntBASIC2.83□□□□□ -1.96
RCCD1A6NED2 MIR1302-7-201ENST00000408841 72 ntBASIC2.83□□□□□ -1.96
RCCD1A6NED2 AL161935.2-201ENST00000414627 60 ntBASIC2.83□□□□□ -1.96
RCCD1A6NED2 EEF1A1P41-201ENST00000414667 207 ntBASIC2.83□□□□□ -1.96
RCCD1A6NED2 RNU6-871P-201ENST00000516122 100 ntBASIC2.83□□□□□ -1.96
RCCD1A6NED2 GTF3AP2-201ENST00000557014 266 ntBASIC2.83□□□□□ -1.96
RCCD1A6NED2 AC006386.2-201ENST00000624491 75 ntBASIC2.83□□□□□ -1.96
RCCD1A6NED2 AC012005.1-201ENST00000624575 75 ntBASIC2.83□□□□□ -1.96
RCCD1A6NED2 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
RCCD1A6NED2 MT-TF-201ENST00000387314 71 ntBASIC2.82□□□□□ -1.96
RCCD1A6NED2 MIR548U-201ENST00000390728 81 ntBASIC2.82□□□□□ -1.96
RCCD1A6NED2 RNU6-922P-201ENST00000516753 99 ntBASIC2.82□□□□□ -1.96
RCCD1A6NED2 EIF4BP1-201ENST00000554881 351 ntBASIC2.82□□□□□ -1.96
RCCD1A6NED2 MIR3670-2-201ENST00000582974 65 ntBASIC2.82□□□□□ -1.96
RCCD1A6NED2 MIR3670-1-201ENST00000584160 65 ntBASIC2.82□□□□□ -1.96
RCCD1A6NED2 MIR3670-3-201ENST00000584855 65 ntBASIC2.82□□□□□ -1.96
RCCD1A6NED2 MIR3670-4-201ENST00000612260 65 ntBASIC2.82□□□□□ -1.96
RCCD1A6NED2 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.81□□□□□ -1.96
RCCD1A6NED2 Y_RNA.283-201ENST00000364798 112 ntBASIC2.81□□□□□ -1.96
RCCD1A6NED2 MT-TN-201ENST00000387400 73 ntBASIC2.81□□□□□ -1.96
RCCD1A6NED2 JTBP1-201ENST00000441314 247 ntBASIC2.81□□□□□ -1.96
RCCD1A6NED2 RNU7-62P-201ENST00000458856 62 ntBASIC2.81□□□□□ -1.96
RCCD1A6NED2 MIR2115-201ENST00000516657 100 ntBASIC2.81□□□□□ -1.96
RCCD1A6NED2 RNU6-539P-201ENST00000516665 103 ntBASIC2.81□□□□□ -1.96
RCCD1A6NED2 RNU6-807P-201ENST00000516805 107 ntBASIC2.81□□□□□ -1.96
RCCD1A6NED2 AC104996.3-201ENST00000590718 94 ntBASIC2.81□□□□□ -1.96
RCCD1A6NED2 Y_RNA.264-201ENST00000364665 102 ntBASIC2.8□□□□□ -1.96
RCCD1A6NED2 SNORD77.2-201ENST00000391045 68 ntBASIC2.8□□□□□ -1.96
RCCD1A6NED2 RNU6-466P-201ENST00000391224 103 ntBASIC2.8□□□□□ -1.96
RCCD1A6NED2 AC245517.4-201ENST00000448601 281 ntBASIC2.8□□□□□ -1.96
RCCD1A6NED2 RNA5SP282-201ENST00000516355 108 ntBASIC2.8□□□□□ -1.96
RCCD1A6NED2 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.8□□□□□ -1.96
RCCD1A6NED2 MIR3064-201ENST00000581130 66 ntBASIC2.8□□□□□ -1.96
RCCD1A6NED2 SNORD92-201ENST00000585078 85 ntBASIC2.8□□□□□ -1.96
RCCD1A6NED2 AC010297.1-201ENST00000623948 149 ntBASIC2.8□□□□□ -1.96
RCCD1A6NED2 AL137790.1-201ENST00000634283 177 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms