Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 U6.111-201ENST00000636093 83 ntBASIC3.37□□□□□ -1.87
HPS5Q9UPZ3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
HPS5Q9UPZ3 AP006437.1-201ENST00000641440 3685 ntBASIC3.37□□□□□ -1.87
HPS5Q9UPZ3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HPS5Q9UPZ3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HPS5Q9UPZ3 RNA5SP68-201ENST00000363885 119 ntBASIC3.36□□□□□ -1.87
HPS5Q9UPZ3 RNA5SP99-201ENST00000364020 114 ntBASIC3.36□□□□□ -1.87
HPS5Q9UPZ3 SNORA9.2-201ENST00000365361 133 ntBASIC3.36□□□□□ -1.87
HPS5Q9UPZ3 RNU6-471P-201ENST00000383944 106 ntBASIC3.36□□□□□ -1.87
HPS5Q9UPZ3 RNU6-1067P-201ENST00000384752 107 ntBASIC3.36□□□□□ -1.87
HPS5Q9UPZ3 SNORD30.1-201ENST00000391309 70 ntBASIC3.36□□□□□ -1.87
HPS5Q9UPZ3 RNU4-83P-201ENST00000410863 133 ntBASIC3.36□□□□□ -1.87
HPS5Q9UPZ3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.36□□□□□ -1.87
HPS5Q9UPZ3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
HPS5Q9UPZ3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HPS5Q9UPZ3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
HPS5Q9UPZ3 RNY1P13-201ENST00000365030 105 ntBASIC3.35□□□□□ -1.87
HPS5Q9UPZ3 RNU6-950P-201ENST00000384651 107 ntBASIC3.35□□□□□ -1.87
HPS5Q9UPZ3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HPS5Q9UPZ3 RPL23AP6-201ENST00000446637 472 ntBASIC3.35□□□□□ -1.87
HPS5Q9UPZ3 AP000753.3-201ENST00000604083 169 ntBASIC3.35□□□□□ -1.87
HPS5Q9UPZ3 MIR6817-201ENST00000615588 66 ntBASIC3.35□□□□□ -1.87
HPS5Q9UPZ3 MIR664A-201ENST00000626086 82 ntBASIC3.35□□□□□ -1.87
HPS5Q9UPZ3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HPS5Q9UPZ3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.34□□□□□ -1.87
HPS5Q9UPZ3 RNU6-859P-201ENST00000362728 107 ntBASIC3.34□□□□□ -1.87
HPS5Q9UPZ3 RNU6-811P-201ENST00000384069 107 ntBASIC3.34□□□□□ -1.87
HPS5Q9UPZ3 MIR526A1-201ENST00000384897 85 ntBASIC3.34□□□□□ -1.87
HPS5Q9UPZ3 RNU6-220P-201ENST00000390919 107 ntBASIC3.34□□□□□ -1.87
HPS5Q9UPZ3 RNA5SP292-201ENST00000390974 118 ntBASIC3.34□□□□□ -1.87
HPS5Q9UPZ3 SNORD77.2-201ENST00000391045 68 ntBASIC3.34□□□□□ -1.87
HPS5Q9UPZ3 MIR1289-2-201ENST00000408360 111 ntBASIC3.34□□□□□ -1.87
HPS5Q9UPZ3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.34□□□□□ -1.87
HPS5Q9UPZ3 AC005786.1-201ENST00000588553 154 ntBASIC3.34□□□□□ -1.87
HPS5Q9UPZ3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HPS5Q9UPZ3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
HPS5Q9UPZ3 AP000648.3-201ENST00000623539 4507 ntBASIC3.33□□□□□ -1.88
HPS5Q9UPZ3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HPS5Q9UPZ3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HPS5Q9UPZ3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HPS5Q9UPZ3 SNRPGP12-201ENST00000449481 213 ntBASIC3.33□□□□□ -1.88
HPS5Q9UPZ3 AC107016.2-201ENST00000547968 190 ntBASIC3.33□□□□□ -1.88
HPS5Q9UPZ3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HPS5Q9UPZ3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HPS5Q9UPZ3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HPS5Q9UPZ3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
HPS5Q9UPZ3 RNU6-296P-201ENST00000384608 107 ntBASIC3.32□□□□□ -1.88
HPS5Q9UPZ3 RNU6-1031P-201ENST00000384773 107 ntBASIC3.32□□□□□ -1.88
HPS5Q9UPZ3 Y_RNA.596-201ENST00000410462 109 ntBASIC3.32□□□□□ -1.88
HPS5Q9UPZ3 AC133485.1-201ENST00000567176 124 ntBASIC3.32□□□□□ -1.88
HPS5Q9UPZ3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.32□□□□□ -1.88
HPS5Q9UPZ3 Y_RNA.164-201ENST00000363709 102 ntBASIC3.31□□□□□ -1.88
HPS5Q9UPZ3 SNORA38-201ENST00000363946 132 ntBASIC3.31□□□□□ -1.88
HPS5Q9UPZ3 RNY1P2-201ENST00000364820 117 ntBASIC3.31□□□□□ -1.88
HPS5Q9UPZ3 MIR512-1-201ENST00000384913 84 ntBASIC3.31□□□□□ -1.88
HPS5Q9UPZ3 AC074348.1-201ENST00000426503 132 ntBASIC3.31□□□□□ -1.88
HPS5Q9UPZ3 AC003982.1-202ENST00000469928 248 ntBASIC3.31□□□□□ -1.88
HPS5Q9UPZ3 RNA5SP148-201ENST00000516527 94 ntBASIC3.31□□□□□ -1.88
HPS5Q9UPZ3 SNORA18.5-201ENST00000516616 101 ntBASIC3.31□□□□□ -1.88
HPS5Q9UPZ3 AC090897.1-201ENST00000580909 226 ntBASIC3.31□□□□□ -1.88
HPS5Q9UPZ3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
HPS5Q9UPZ3 Y_RNA.264-201ENST00000364665 102 ntBASIC3.3□□□□□ -1.88
HPS5Q9UPZ3 CD24P4-201ENST00000382840 243 ntBASIC3.3□□□□□ -1.88
HPS5Q9UPZ3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.3□□□□□ -1.88
HPS5Q9UPZ3 RNU6-303P-201ENST00000517091 106 ntBASIC3.3□□□□□ -1.88
HPS5Q9UPZ3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HPS5Q9UPZ3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HPS5Q9UPZ3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HPS5Q9UPZ3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HPS5Q9UPZ3 RNU6-1237P-201ENST00000384777 107 ntBASIC3.29□□□□□ -1.88
HPS5Q9UPZ3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.29□□□□□ -1.88
HPS5Q9UPZ3 AC005908.1-201ENST00000468701 347 ntBASIC3.29□□□□□ -1.88
HPS5Q9UPZ3 CYP3A52P-201ENST00000563326 91 ntBASIC3.29□□□□□ -1.88
HPS5Q9UPZ3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC3.29□□□□□ -1.88
HPS5Q9UPZ3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
HPS5Q9UPZ3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.28□□□□□ -1.88
HPS5Q9UPZ3 MIR9-1-201ENST00000385198 89 ntBASIC3.28□□□□□ -1.88
HPS5Q9UPZ3 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.28□□□□□ -1.88
HPS5Q9UPZ3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.28□□□□□ -1.88
HPS5Q9UPZ3 RNA5SP458-201ENST00000516188 119 ntBASIC3.28□□□□□ -1.88
HPS5Q9UPZ3 RNU6-850P-201ENST00000516934 103 ntBASIC3.28□□□□□ -1.88
HPS5Q9UPZ3 AC141846.1-201ENST00000568348 142 ntBASIC3.28□□□□□ -1.88
HPS5Q9UPZ3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
HPS5Q9UPZ3 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HPS5Q9UPZ3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
HPS5Q9UPZ3 Y_RNA.226-201ENST00000364337 114 ntBASIC3.27□□□□□ -1.89
HPS5Q9UPZ3 SNORA72.6-201ENST00000384520 129 ntBASIC3.27□□□□□ -1.89
HPS5Q9UPZ3 RNU6-1241P-201ENST00000384536 107 ntBASIC3.27□□□□□ -1.89
HPS5Q9UPZ3 RNU6-663P-201ENST00000391105 106 ntBASIC3.27□□□□□ -1.89
HPS5Q9UPZ3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.27□□□□□ -1.89
HPS5Q9UPZ3 MIR4506-201ENST00000584693 77 ntBASIC3.27□□□□□ -1.89
HPS5Q9UPZ3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HPS5Q9UPZ3 RNU6-208P-201ENST00000362431 107 ntBASIC3.26□□□□□ -1.89
HPS5Q9UPZ3 RNA5SP385-201ENST00000515947 110 ntBASIC3.26□□□□□ -1.89
HPS5Q9UPZ3 SNORA74.3-201ENST00000517108 154 ntBASIC3.26□□□□□ -1.89
HPS5Q9UPZ3 MIR5094-201ENST00000578766 85 ntBASIC3.26□□□□□ -1.89
HPS5Q9UPZ3 MIR4536-1-201ENST00000583537 88 ntBASIC3.26□□□□□ -1.89
HPS5Q9UPZ3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HPS5Q9UPZ3 AC023790.1-201ENST00000482174 347 ntBASIC3.25□□□□□ -1.89
HPS5Q9UPZ3 RPS27P21-201ENST00000486977 252 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms