Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 RNU7-99P-201ENST00000516271 62 ntBASIC2.96□□□□□ -1.94
COL17A1Q9UMD9 RNU7-153P-201ENST00000516455 62 ntBASIC2.96□□□□□ -1.94
COL17A1Q9UMD9 AL359075.3-201ENST00000613288 217 ntBASIC2.96□□□□□ -1.94
COL17A1Q9UMD9 MIR6895-201ENST00000613497 78 ntBASIC2.96□□□□□ -1.94
COL17A1Q9UMD9 RNU6-1313P-201ENST00000362622 102 ntBASIC2.95□□□□□ -1.94
COL17A1Q9UMD9 snoU2-30.2-201ENST00000362805 70 ntBASIC2.95□□□□□ -1.94
COL17A1Q9UMD9 RNU6-411P-201ENST00000384451 107 ntBASIC2.95□□□□□ -1.94
COL17A1Q9UMD9 SRIP3-201ENST00000413200 219 ntBASIC2.95□□□□□ -1.94
COL17A1Q9UMD9 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.94□□□□□ -1.94
COL17A1Q9UMD9 SNORA1.1-201ENST00000364671 133 ntBASIC2.94□□□□□ -1.94
COL17A1Q9UMD9 RNU6-613P-201ENST00000410412 108 ntBASIC2.94□□□□□ -1.94
COL17A1Q9UMD9 AC099677.2-201ENST00000436385 175 ntBASIC2.94□□□□□ -1.94
COL17A1Q9UMD9 ICE2P2-201ENST00000483823 2787 ntBASIC2.94□□□□□ -1.94
COL17A1Q9UMD9 RNU1-142P-201ENST00000516682 145 ntBASIC2.94□□□□□ -1.94
COL17A1Q9UMD9 RNU6-667P-201ENST00000517186 102 ntBASIC2.94□□□□□ -1.94
COL17A1Q9UMD9 AC078899.2-201ENST00000595282 212 ntBASIC2.94□□□□□ -1.94
COL17A1Q9UMD9 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.94□□□□□ -1.94
COL17A1Q9UMD9 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
COL17A1Q9UMD9 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
COL17A1Q9UMD9 MIR126-201ENST00000362291 85 ntBASIC2.93□□□□□ -1.94
COL17A1Q9UMD9 MIR515-2-201ENST00000384883 83 ntBASIC2.93□□□□□ -1.94
COL17A1Q9UMD9 MIR515-1-201ENST00000384884 83 ntBASIC2.93□□□□□ -1.94
COL17A1Q9UMD9 AC060773.1-201ENST00000421698 310 ntBASIC2.93□□□□□ -1.94
COL17A1Q9UMD9 RNU7-94P-201ENST00000459576 63 ntBASIC2.93□□□□□ -1.94
COL17A1Q9UMD9 SNORA31.4-201ENST00000516049 129 ntBASIC2.93□□□□□ -1.94
COL17A1Q9UMD9 RNU6-1291P-201ENST00000516591 104 ntBASIC2.93□□□□□ -1.94
COL17A1Q9UMD9 AP003484.1-201ENST00000530974 250 ntBASIC2.93□□□□□ -1.94
COL17A1Q9UMD9 SEPT14P17-201ENST00000617978 177 ntBASIC2.93□□□□□ -1.94
COL17A1Q9UMD9 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.93□□□□□ -1.94
COL17A1Q9UMD9 SNORD56.5-201ENST00000364281 72 ntBASIC2.92□□□□□ -1.94
COL17A1Q9UMD9 Y_RNA.299-201ENST00000364973 94 ntBASIC2.92□□□□□ -1.94
COL17A1Q9UMD9 MIR802-201ENST00000390235 94 ntBASIC2.92□□□□□ -1.94
COL17A1Q9UMD9 RNA5SP323-201ENST00000391094 133 ntBASIC2.92□□□□□ -1.94
COL17A1Q9UMD9 RNU2-59P-201ENST00000410482 191 ntBASIC2.92□□□□□ -1.94
COL17A1Q9UMD9 AC004965.1-201ENST00000413033 213 ntBASIC2.92□□□□□ -1.94
COL17A1Q9UMD9 MIR1270-201ENST00000459320 83 ntBASIC2.92□□□□□ -1.94
COL17A1Q9UMD9 UBL5P1-201ENST00000507979 193 ntBASIC2.92□□□□□ -1.94
COL17A1Q9UMD9 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.92□□□□□ -1.94
COL17A1Q9UMD9 SNORD115-39-201ENST00000363694 82 ntBASIC2.91□□□□□ -1.94
COL17A1Q9UMD9 Y_RNA.171-201ENST00000363760 102 ntBASIC2.91□□□□□ -1.94
COL17A1Q9UMD9 RNU6-296P-201ENST00000384608 107 ntBASIC2.91□□□□□ -1.94
COL17A1Q9UMD9 SNORA25.13-201ENST00000516395 103 ntBASIC2.91□□□□□ -1.94
COL17A1Q9UMD9 AL358944.1-201ENST00000528537 144 ntBASIC2.91□□□□□ -1.94
COL17A1Q9UMD9 AC006441.5-201ENST00000612680 209 ntBASIC2.91□□□□□ -1.94
COL17A1Q9UMD9 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.91□□□□□ -1.94
COL17A1Q9UMD9 Y_RNA.99-201ENST00000363138 105 ntBASIC2.9□□□□□ -1.94
COL17A1Q9UMD9 Y_RNA.327-201ENST00000365201 102 ntBASIC2.9□□□□□ -1.94
COL17A1Q9UMD9 RNU6-649P-201ENST00000384463 107 ntBASIC2.9□□□□□ -1.94
COL17A1Q9UMD9 POLR2J4-204ENST00000418424 324 ntBASIC2.9□□□□□ -1.94
COL17A1Q9UMD9 Z96811.1-201ENST00000445880 108 ntBASIC2.9□□□□□ -1.94
COL17A1Q9UMD9 RNU6-1258P-201ENST00000516911 111 ntBASIC2.9□□□□□ -1.94
COL17A1Q9UMD9 AC087685.1-201ENST00000587507 141 ntBASIC2.9□□□□□ -1.94
COL17A1Q9UMD9 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.94
COL17A1Q9UMD9 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
COL17A1Q9UMD9 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
COL17A1Q9UMD9 VTRNA1-1-201ENST00000363120 99 ntBASIC2.9□□□□□ -1.95
COL17A1Q9UMD9 RNU6-160P-201ENST00000384591 107 ntBASIC2.9□□□□□ -1.95
COL17A1Q9UMD9 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
COL17A1Q9UMD9 HMGN2P35-201ENST00000412164 270 ntBASIC2.9□□□□□ -1.95
COL17A1Q9UMD9 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.9□□□□□ -1.95
COL17A1Q9UMD9 MIR4452-201ENST00000583004 71 ntBASIC2.9□□□□□ -1.95
COL17A1Q9UMD9 AL353149.1-201ENST00000610667 244 ntBASIC2.9□□□□□ -1.95
COL17A1Q9UMD9 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.9□□□□□ -1.95
COL17A1Q9UMD9 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
COL17A1Q9UMD9 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
COL17A1Q9UMD9 RNU6-268P-201ENST00000364174 107 ntBASIC2.89□□□□□ -1.95
COL17A1Q9UMD9 RNU6-220P-201ENST00000390919 107 ntBASIC2.89□□□□□ -1.95
COL17A1Q9UMD9 SNORD77B-201ENST00000391112 67 ntBASIC2.89□□□□□ -1.95
COL17A1Q9UMD9 FTH1P12-201ENST00000432137 551 ntBASIC2.89□□□□□ -1.95
COL17A1Q9UMD9 RNU7-113P-201ENST00000459273 62 ntBASIC2.89□□□□□ -1.95
COL17A1Q9UMD9 AC104435.1-201ENST00000483483 166 ntBASIC2.89□□□□□ -1.95
COL17A1Q9UMD9 RNU6-1041P-201ENST00000516254 102 ntBASIC2.89□□□□□ -1.95
COL17A1Q9UMD9 RNU6-341P-201ENST00000516973 96 ntBASIC2.89□□□□□ -1.95
COL17A1Q9UMD9 RNU6-448P-201ENST00000517052 107 ntBASIC2.89□□□□□ -1.95
COL17A1Q9UMD9 MIR548AE2-201ENST00000583456 67 ntBASIC2.89□□□□□ -1.95
COL17A1Q9UMD9 PVT1_3.1-201ENST00000620853 95 ntBASIC2.89□□□□□ -1.95
COL17A1Q9UMD9 AC021613.1-201ENST00000623880 111 ntBASIC2.89□□□□□ -1.95
COL17A1Q9UMD9 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
COL17A1Q9UMD9 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.88□□□□□ -1.95
COL17A1Q9UMD9 SNORA25B-201ENST00000365507 128 ntBASIC2.88□□□□□ -1.95
COL17A1Q9UMD9 RNU6-800P-201ENST00000384473 103 ntBASIC2.88□□□□□ -1.95
COL17A1Q9UMD9 MIR522-201ENST00000385071 87 ntBASIC2.88□□□□□ -1.95
COL17A1Q9UMD9 RNU2-48P-201ENST00000410694 191 ntBASIC2.88□□□□□ -1.95
COL17A1Q9UMD9 UBBP3-201ENST00000445497 241 ntBASIC2.88□□□□□ -1.95
COL17A1Q9UMD9 ATP5J2P3-201ENST00000451550 258 ntBASIC2.88□□□□□ -1.95
COL17A1Q9UMD9 RNU1-98P-201ENST00000458992 160 ntBASIC2.88□□□□□ -1.95
COL17A1Q9UMD9 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.87□□□□□ -1.95
COL17A1Q9UMD9 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
COL17A1Q9UMD9 Y_RNA.267-201ENST00000364679 109 ntBASIC2.87□□□□□ -1.95
COL17A1Q9UMD9 RNU6-499P-201ENST00000365615 107 ntBASIC2.87□□□□□ -1.95
COL17A1Q9UMD9 Y_RNA.470-201ENST00000384307 117 ntBASIC2.87□□□□□ -1.95
COL17A1Q9UMD9 RNU6-687P-201ENST00000516443 89 ntBASIC2.87□□□□□ -1.95
COL17A1Q9UMD9 RNA5SP102-201ENST00000516865 106 ntBASIC2.87□□□□□ -1.95
COL17A1Q9UMD9 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.87□□□□□ -1.95
COL17A1Q9UMD9 AC024995.1-201ENST00000523014 93 ntBASIC2.87□□□□□ -1.95
COL17A1Q9UMD9 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.87□□□□□ -1.95
COL17A1Q9UMD9 MIR6079-201ENST00000635807 62 ntBASIC2.87□□□□□ -1.95
COL17A1Q9UMD9 AC245060.5-201ENST00000610778 3293 ntBASIC2.86□□□□□ -1.95
COL17A1Q9UMD9 RNU6-624P-201ENST00000363411 107 ntBASIC2.86□□□□□ -1.95
COL17A1Q9UMD9 RNU6-1244P-201ENST00000363614 108 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 7.7 ms