Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
KRTAP3-1Q9BYR8 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC1.6□□□□□ -2.15
KRTAP3-1Q9BYR8 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
KRTAP3-1Q9BYR8 MIR101-2-201ENST00000362195 79 ntBASIC1.6□□□□□ -2.15
KRTAP3-1Q9BYR8 SNORA8.1-201ENST00000384250 140 ntBASIC1.6□□□□□ -2.15
KRTAP3-1Q9BYR8 RNU6-1241P-201ENST00000384536 107 ntBASIC1.6□□□□□ -2.15
KRTAP3-1Q9BYR8 UBE2Q2P12-201ENST00000414573 204 ntBASIC1.6□□□□□ -2.15
KRTAP3-1Q9BYR8 RPS29P6-201ENST00000438196 145 ntBASIC1.6□□□□□ -2.15
KRTAP3-1Q9BYR8 RNU7-106P-201ENST00000459514 67 ntBASIC1.6□□□□□ -2.15
KRTAP3-1Q9BYR8 RN7SL20P-201ENST00000488827 297 ntBASIC1.6□□□□□ -2.15
KRTAP3-1Q9BYR8 SNORA25.16-201ENST00000516741 121 ntBASIC1.6□□□□□ -2.15
KRTAP3-1Q9BYR8 RNU11-2P-201ENST00000516898 142 ntBASIC1.6□□□□□ -2.15
KRTAP3-1Q9BYR8 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC1.6□□□□□ -2.15
KRTAP3-1Q9BYR8 MIR4491-201ENST00000581087 68 ntBASIC1.6□□□□□ -2.15
KRTAP3-1Q9BYR8 MIR3922-201ENST00000585192 84 ntBASIC1.6□□□□□ -2.15
KRTAP3-1Q9BYR8 MIR378J-201ENST00000611988 109 ntBASIC1.6□□□□□ -2.15
KRTAP3-1Q9BYR8 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.6□□□□□ -2.15
KRTAP3-1Q9BYR8 MIR664A-201ENST00000626086 82 ntBASIC1.6□□□□□ -2.15
KRTAP3-1Q9BYR8 U6.111-201ENST00000636093 83 ntBASIC1.6□□□□□ -2.15
KRTAP3-1Q9BYR8 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
KRTAP3-1Q9BYR8 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
KRTAP3-1Q9BYR8 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
KRTAP3-1Q9BYR8 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
KRTAP3-1Q9BYR8 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
KRTAP3-1Q9BYR8 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.15
KRTAP3-1Q9BYR8 Y_RNA.205-201ENST00000364128 113 ntBASIC1.59□□□□□ -2.15
KRTAP3-1Q9BYR8 Y_RNA.239-201ENST00000364444 113 ntBASIC1.59□□□□□ -2.15
KRTAP3-1Q9BYR8 SNORA5A-201ENST00000384111 134 ntBASIC1.59□□□□□ -2.15
KRTAP3-1Q9BYR8 MIR18B-201ENST00000454574 71 ntBASIC1.59□□□□□ -2.15
KRTAP3-1Q9BYR8 SNORA9.3-201ENST00000516383 129 ntBASIC1.59□□□□□ -2.15
KRTAP3-1Q9BYR8 RNU6-250P-201ENST00000516958 103 ntBASIC1.59□□□□□ -2.15
KRTAP3-1Q9BYR8 MIR548H5-201ENST00000580314 60 ntBASIC1.59□□□□□ -2.15
KRTAP3-1Q9BYR8 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.59□□□□□ -2.15
KRTAP3-1Q9BYR8 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP3-1Q9BYR8 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
KRTAP3-1Q9BYR8 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
KRTAP3-1Q9BYR8 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP3-1Q9BYR8 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
KRTAP3-1Q9BYR8 Y_RNA.36-201ENST00000362602 112 ntBASIC1.58□□□□□ -2.16
KRTAP3-1Q9BYR8 RNU6-403P-201ENST00000363163 104 ntBASIC1.58□□□□□ -2.16
KRTAP3-1Q9BYR8 SNORA3A-201ENST00000364113 130 ntBASIC1.58□□□□□ -2.16
KRTAP3-1Q9BYR8 Y_RNA.386-201ENST00000383913 105 ntBASIC1.58□□□□□ -2.16
KRTAP3-1Q9BYR8 RNU6-800P-201ENST00000384473 103 ntBASIC1.58□□□□□ -2.16
KRTAP3-1Q9BYR8 MIR519A1-201ENST00000385257 85 ntBASIC1.58□□□□□ -2.16
KRTAP3-1Q9BYR8 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
KRTAP3-1Q9BYR8 RNU6-663P-201ENST00000391105 106 ntBASIC1.58□□□□□ -2.16
KRTAP3-1Q9BYR8 Y_RNA.588-201ENST00000391254 102 ntBASIC1.58□□□□□ -2.16
KRTAP3-1Q9BYR8 MIR942-201ENST00000401111 86 ntBASIC1.58□□□□□ -2.16
KRTAP3-1Q9BYR8 HIST1H2APS3-201ENST00000403259 134 ntBASIC1.58□□□□□ -2.16
KRTAP3-1Q9BYR8 SNORD100-201ENST00000408573 76 ntBASIC1.58□□□□□ -2.16
KRTAP3-1Q9BYR8 RNA5SP492-201ENST00000411330 114 ntBASIC1.58□□□□□ -2.16
KRTAP3-1Q9BYR8 RPS27P16-201ENST00000425758 201 ntBASIC1.58□□□□□ -2.16
KRTAP3-1Q9BYR8 MIR4276-201ENST00000584832 70 ntBASIC1.58□□□□□ -2.16
KRTAP3-1Q9BYR8 MIR4443-201ENST00000585052 53 ntBASIC1.58□□□□□ -2.16
KRTAP3-1Q9BYR8 uc_338.6-201ENST00000613544 171 ntBASIC1.58□□□□□ -2.16
KRTAP3-1Q9BYR8 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP3-1Q9BYR8 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
KRTAP3-1Q9BYR8 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
KRTAP3-1Q9BYR8 AL596028.1-201ENST00000326971 197 ntBASIC1.57□□□□□ -2.16
KRTAP3-1Q9BYR8 MIR103A2-201ENST00000362154 78 ntBASIC1.57□□□□□ -2.16
KRTAP3-1Q9BYR8 Y_RNA.42-201ENST00000362660 108 ntBASIC1.57□□□□□ -2.16
KRTAP3-1Q9BYR8 RNU1-36P-201ENST00000365130 165 ntBASIC1.57□□□□□ -2.16
KRTAP3-1Q9BYR8 RNU6-1051P-201ENST00000365471 102 ntBASIC1.57□□□□□ -2.16
KRTAP3-1Q9BYR8 AL359837.1-201ENST00000381357 287 ntBASIC1.57□□□□□ -2.16
KRTAP3-1Q9BYR8 Y_RNA.536-201ENST00000384621 113 ntBASIC1.57□□□□□ -2.16
KRTAP3-1Q9BYR8 RNU6-540P-201ENST00000384622 101 ntBASIC1.57□□□□□ -2.16
KRTAP3-1Q9BYR8 MIR490-201ENST00000384865 128 ntBASIC1.57□□□□□ -2.16
KRTAP3-1Q9BYR8 RNU6-947P-201ENST00000516264 106 ntBASIC1.57□□□□□ -2.16
KRTAP3-1Q9BYR8 RNU7-193P-201ENST00000516723 65 ntBASIC1.57□□□□□ -2.16
KRTAP3-1Q9BYR8 MIR3200-201ENST00000580767 85 ntBASIC1.57□□□□□ -2.16
KRTAP3-1Q9BYR8 TRDV1-202ENST00000621643 102 ntBASIC1.57□□□□□ -2.16
KRTAP3-1Q9BYR8 MIR6516-201ENST00000630554 81 ntBASIC1.57□□□□□ -2.16
KRTAP3-1Q9BYR8 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
KRTAP3-1Q9BYR8 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
KRTAP3-1Q9BYR8 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC1.57□□□□□ -2.16
KRTAP3-1Q9BYR8 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
KRTAP3-1Q9BYR8 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
KRTAP3-1Q9BYR8 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP3-1Q9BYR8 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.56□□□□□ -2.16
KRTAP3-1Q9BYR8 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP3-1Q9BYR8 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP3-1Q9BYR8 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP3-1Q9BYR8 RNU4-82P-201ENST00000362443 140 ntBASIC1.56□□□□□ -2.16
KRTAP3-1Q9BYR8 RNU6-681P-201ENST00000364012 104 ntBASIC1.56□□□□□ -2.16
KRTAP3-1Q9BYR8 Y_RNA.207-201ENST00000364142 106 ntBASIC1.56□□□□□ -2.16
KRTAP3-1Q9BYR8 RNU1-52P-201ENST00000384190 164 ntBASIC1.56□□□□□ -2.16
KRTAP3-1Q9BYR8 SNORD90-201ENST00000391145 111 ntBASIC1.56□□□□□ -2.16
KRTAP3-1Q9BYR8 RN7SKP123-201ENST00000410732 291 ntBASIC1.56□□□□□ -2.16
KRTAP3-1Q9BYR8 RNU7-195P-201ENST00000458793 62 ntBASIC1.56□□□□□ -2.16
KRTAP3-1Q9BYR8 Y_RNA.809-201ENST00000516058 95 ntBASIC1.56□□□□□ -2.16
KRTAP3-1Q9BYR8 SNORA31.26-201ENST00000517250 137 ntBASIC1.56□□□□□ -2.16
KRTAP3-1Q9BYR8 MIR4700-201ENST00000578311 74 ntBASIC1.56□□□□□ -2.16
KRTAP3-1Q9BYR8 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.56□□□□□ -2.16
KRTAP3-1Q9BYR8 AC007318.2-201ENST00000620999 243 ntBASIC1.56□□□□□ -2.16
KRTAP3-1Q9BYR8 AC068724.3-201ENST00000625906 87 ntBASIC1.56□□□□□ -2.16
KRTAP3-1Q9BYR8 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP3-1Q9BYR8 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC1.56□□□□□ -2.16
KRTAP3-1Q9BYR8 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
KRTAP3-1Q9BYR8 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
KRTAP3-1Q9BYR8 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms