Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 Y_RNA.291-201ENST00000364886 113 ntBASIC1.61□□□□□ -2.15
SMOQ99835 RNU6-1154P-201ENST00000391001 104 ntBASIC1.61□□□□□ -2.15
SMOQ99835 Y_RNA.630-201ENST00000411370 108 ntBASIC1.61□□□□□ -2.15
SMOQ99835 snoU13.25-201ENST00000458945 104 ntBASIC1.61□□□□□ -2.15
SMOQ99835 MIR3937-201ENST00000580135 106 ntBASIC1.61□□□□□ -2.15
SMOQ99835 AL357312.1-201ENST00000603879 298 ntBASIC1.61□□□□□ -2.15
SMOQ99835 AL137067.1-201ENST00000615933 120 ntBASIC1.61□□□□□ -2.15
SMOQ99835 RNA5SP363-201ENST00000365072 115 ntBASIC1.6□□□□□ -2.15
SMOQ99835 SNORD58C-201ENST00000365223 64 ntBASIC1.6□□□□□ -2.15
SMOQ99835 MIR517C-201ENST00000385103 95 ntBASIC1.6□□□□□ -2.15
SMOQ99835 SNORA26.6-201ENST00000391256 115 ntBASIC1.6□□□□□ -2.15
SMOQ99835 BTF3P4-201ENST00000418852 495 ntBASIC1.6□□□□□ -2.15
SMOQ99835 HMGN1P33-201ENST00000432945 451 ntBASIC1.6□□□□□ -2.15
SMOQ99835 snoU13.16-201ENST00000459350 104 ntBASIC1.6□□□□□ -2.15
SMOQ99835 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.6□□□□□ -2.15
SMOQ99835 RNU6-1061P-201ENST00000516530 99 ntBASIC1.6□□□□□ -2.15
SMOQ99835 MIR548AO-201ENST00000579992 96 ntBASIC1.6□□□□□ -2.15
SMOQ99835 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
SMOQ99835 AC021613.1-201ENST00000623880 111 ntBASIC1.6□□□□□ -2.15
SMOQ99835 MIR4251-201ENST00000635819 61 ntBASIC1.6□□□□□ -2.15
SMOQ99835 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.59□□□□□ -2.15
SMOQ99835 RNA5SP205-201ENST00000364653 136 ntBASIC1.59□□□□□ -2.15
SMOQ99835 RPS27P16-201ENST00000425758 201 ntBASIC1.59□□□□□ -2.15
SMOQ99835 RNU6-947P-201ENST00000516264 106 ntBASIC1.59□□□□□ -2.15
SMOQ99835 Y_RNA.712-201ENST00000517011 92 ntBASIC1.59□□□□□ -2.15
SMOQ99835 AL359821.1-201ENST00000605519 182 ntBASIC1.59□□□□□ -2.15
SMOQ99835 AL020996.3-201ENST00000606617 222 ntBASIC1.59□□□□□ -2.15
SMOQ99835 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.16
SMOQ99835 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SMOQ99835 SNORD33-201ENST00000362761 85 ntBASIC1.58□□□□□ -2.16
SMOQ99835 RNU6-1081P-201ENST00000384537 107 ntBASIC1.58□□□□□ -2.16
SMOQ99835 MIRLET7F2-201ENST00000385277 83 ntBASIC1.58□□□□□ -2.16
SMOQ99835 SNORA67.6-201ENST00000391093 99 ntBASIC1.58□□□□□ -2.16
SMOQ99835 RNU1-78P-201ENST00000391248 165 ntBASIC1.58□□□□□ -2.16
SMOQ99835 MIR934-201ENST00000401241 83 ntBASIC1.58□□□□□ -2.16
SMOQ99835 AC009474.2-201ENST00000451383 136 ntBASIC1.58□□□□□ -2.16
SMOQ99835 RN7SKP179-201ENST00000516126 217 ntBASIC1.58□□□□□ -2.16
SMOQ99835 RNU6-165P-201ENST00000517170 99 ntBASIC1.58□□□□□ -2.16
SMOQ99835 AC021443.1-201ENST00000604478 211 ntBASIC1.58□□□□□ -2.16
SMOQ99835 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.58□□□□□ -2.16
SMOQ99835 MIR3914-2-201ENST00000637339 95 ntBASIC1.58□□□□□ -2.16
SMOQ99835 RNU6-1065P-201ENST00000384513 106 ntBASIC1.57□□□□□ -2.16
SMOQ99835 RNU6-1319P-201ENST00000390855 104 ntBASIC1.57□□□□□ -2.16
SMOQ99835 RNU6-747P-201ENST00000390928 104 ntBASIC1.57□□□□□ -2.16
SMOQ99835 RNU6-241P-201ENST00000391148 104 ntBASIC1.57□□□□□ -2.16
SMOQ99835 MIR1304-201ENST00000408243 91 ntBASIC1.57□□□□□ -2.16
SMOQ99835 MIR1263-201ENST00000408324 86 ntBASIC1.57□□□□□ -2.16
SMOQ99835 RNU6-177P-201ENST00000411257 104 ntBASIC1.57□□□□□ -2.16
SMOQ99835 RNU2-35P-201ENST00000516446 142 ntBASIC1.57□□□□□ -2.16
SMOQ99835 AL512310.8-201ENST00000550183 120 ntBASIC1.57□□□□□ -2.16
SMOQ99835 MIR3664-201ENST00000579074 99 ntBASIC1.57□□□□□ -2.16
SMOQ99835 MIR4285-201ENST00000581001 85 ntBASIC1.57□□□□□ -2.16
SMOQ99835 MIR4305-201ENST00000583252 102 ntBASIC1.57□□□□□ -2.16
SMOQ99835 MIR8055-201ENST00000610739 97 ntBASIC1.57□□□□□ -2.16
SMOQ99835 RNA5SP144-201ENST00000410846 116 ntBASIC1.56□□□□□ -2.16
SMOQ99835 POLR2J4-204ENST00000418424 324 ntBASIC1.56□□□□□ -2.16
SMOQ99835 AC090844.1-201ENST00000422019 156 ntBASIC1.56□□□□□ -2.16
SMOQ99835 AL354695.1-201ENST00000427935 228 ntBASIC1.56□□□□□ -2.16
SMOQ99835 RNU7-164P-201ENST00000459221 62 ntBASIC1.56□□□□□ -2.16
SMOQ99835 RNU7-123P-201ENST00000515911 60 ntBASIC1.56□□□□□ -2.16
SMOQ99835 RNY4P20-201ENST00000516678 93 ntBASIC1.56□□□□□ -2.16
SMOQ99835 DNAJC19P9-201ENST00000555084 351 ntBASIC1.56□□□□□ -2.16
SMOQ99835 MIR4422-201ENST00000581938 83 ntBASIC1.56□□□□□ -2.16
SMOQ99835 MIR6717-201ENST00000622747 73 ntBASIC1.56□□□□□ -2.16
SMOQ99835 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.55□□□□□ -2.16
SMOQ99835 SNORA25.3-201ENST00000363205 127 ntBASIC1.55□□□□□ -2.16
SMOQ99835 RNA5SP48-201ENST00000363969 126 ntBASIC1.55□□□□□ -2.16
SMOQ99835 Y_RNA.298-201ENST00000364960 107 ntBASIC1.55□□□□□ -2.16
SMOQ99835 Y_RNA.563-201ENST00000384707 108 ntBASIC1.55□□□□□ -2.16
SMOQ99835 MIR1302-7-201ENST00000408841 72 ntBASIC1.55□□□□□ -2.16
SMOQ99835 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.55□□□□□ -2.16
SMOQ99835 AP1B1P2-201ENST00000416196 106 ntBASIC1.55□□□□□ -2.16
SMOQ99835 RNU7-95P-201ENST00000459222 64 ntBASIC1.55□□□□□ -2.16
SMOQ99835 SNORA31.24-201ENST00000517232 57 ntBASIC1.55□□□□□ -2.16
SMOQ99835 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.55□□□□□ -2.16
SMOQ99835 MIR548AI-201ENST00000579940 88 ntBASIC1.55□□□□□ -2.16
SMOQ99835 AC025166.1-201ENST00000612411 163 ntBASIC1.55□□□□□ -2.16
SMOQ99835 MIR6841-201ENST00000637129 72 ntBASIC1.55□□□□□ -2.16
SMOQ99835 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
SMOQ99835 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SMOQ99835 MIR320A-201ENST00000385302 82 ntBASIC1.54□□□□□ -2.16
SMOQ99835 RPL39P39-201ENST00000455840 151 ntBASIC1.54□□□□□ -2.16
SMOQ99835 RPL30P7-201ENST00000479312 323 ntBASIC1.54□□□□□ -2.16
SMOQ99835 RNU6-1258P-201ENST00000516911 111 ntBASIC1.54□□□□□ -2.16
SMOQ99835 AL359881.1-201ENST00000602916 267 ntBASIC1.54□□□□□ -2.16
SMOQ99835 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.54□□□□□ -2.16
SMOQ99835 Z97988.1-201ENST00000637697 135 ntBASIC1.54□□□□□ -2.16
SMOQ99835 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.54□□□□□ -2.16
SMOQ99835 SNORA22.1-201ENST00000362701 134 ntBASIC1.53□□□□□ -2.16
SMOQ99835 RNU6-1290P-201ENST00000362957 109 ntBASIC1.53□□□□□ -2.16
SMOQ99835 Y_RNA.528-201ENST00000384575 108 ntBASIC1.53□□□□□ -2.16
SMOQ99835 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
SMOQ99835 AL512326.2-201ENST00000426359 151 ntBASIC1.53□□□□□ -2.16
SMOQ99835 MTND5P18-201ENST00000445624 1801 ntBASIC1.53□□□□□ -2.16
SMOQ99835 SNORD33.1-201ENST00000516213 88 ntBASIC1.53□□□□□ -2.16
SMOQ99835 MIR3152-201ENST00000579801 74 ntBASIC1.53□□□□□ -2.16
SMOQ99835 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
SMOQ99835 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SMOQ99835 Y_RNA.171-201ENST00000363760 102 ntBASIC1.52□□□□□ -2.17
SMOQ99835 SNORA1.1-201ENST00000364671 133 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 178.7 ms