Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 RNU6-1110P-201ENST00000516462 101 ntBASIC0.44□□□□□ -2.34
LINC00477Q96M19 MIR4744-201ENST00000581563 82 ntBASIC0.44□□□□□ -2.34
LINC00477Q96M19 MIR4804-201ENST00000581683 73 ntBASIC0.44□□□□□ -2.34
LINC00477Q96M19 MIR4676-201ENST00000583078 72 ntBASIC0.44□□□□□ -2.34
LINC00477Q96M19 AC141273.2-201ENST00000618989 130 ntBASIC0.44□□□□□ -2.34
LINC00477Q96M19 AC091932.4-201ENST00000623386 200 ntBASIC0.44□□□□□ -2.34
LINC00477Q96M19 Y_RNA.182-201ENST00000363880 111 ntBASIC0.43□□□□□ -2.34
LINC00477Q96M19 Y_RNA.274-201ENST00000364714 101 ntBASIC0.43□□□□□ -2.34
LINC00477Q96M19 Y_RNA.351-201ENST00000365436 96 ntBASIC0.43□□□□□ -2.34
LINC00477Q96M19 RNY3P5-201ENST00000384127 102 ntBASIC0.43□□□□□ -2.34
LINC00477Q96M19 MIR520H-201ENST00000385126 88 ntBASIC0.43□□□□□ -2.34
LINC00477Q96M19 RNU1-119P-201ENST00000391122 165 ntBASIC0.43□□□□□ -2.34
LINC00477Q96M19 RNU6-1165P-201ENST00000410119 107 ntBASIC0.43□□□□□ -2.34
LINC00477Q96M19 RNU7-56P-201ENST00000458744 62 ntBASIC0.43□□□□□ -2.34
LINC00477Q96M19 Y_RNA.676-201ENST00000516393 96 ntBASIC0.43□□□□□ -2.34
LINC00477Q96M19 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.43□□□□□ -2.34
LINC00477Q96M19 AC130289.1-201ENST00000577321 73 ntBASIC0.43□□□□□ -2.34
LINC00477Q96M19 MIR4264-201ENST00000583520 66 ntBASIC0.43□□□□□ -2.34
LINC00477Q96M19 AL365205.2-201ENST00000594586 68 ntBASIC0.43□□□□□ -2.34
LINC00477Q96M19 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.43□□□□□ -2.34
LINC00477Q96M19 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
LINC00477Q96M19 AL596211.1-201ENST00000569873 2277 ntBASIC0.42□□□□□ -2.34
LINC00477Q96M19 MIR1-1-201ENST00000362147 71 ntBASIC0.42□□□□□ -2.34
LINC00477Q96M19 SNORD18A-201ENST00000363753 72 ntBASIC0.42□□□□□ -2.34
LINC00477Q96M19 Y_RNA.191-201ENST00000363972 113 ntBASIC0.42□□□□□ -2.34
LINC00477Q96M19 RNU6-1082P-201ENST00000364574 107 ntBASIC0.42□□□□□ -2.34
LINC00477Q96M19 RNU6-728P-201ENST00000365375 104 ntBASIC0.42□□□□□ -2.34
LINC00477Q96M19 MIR520F-201ENST00000384824 87 ntBASIC0.42□□□□□ -2.34
LINC00477Q96M19 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.42□□□□□ -2.34
LINC00477Q96M19 MIR548H3-201ENST00000408771 118 ntBASIC0.42□□□□□ -2.34
LINC00477Q96M19 Y_RNA.617-201ENST00000410920 90 ntBASIC0.42□□□□□ -2.34
LINC00477Q96M19 RNA5SP222-201ENST00000411039 105 ntBASIC0.42□□□□□ -2.34
LINC00477Q96M19 RNU7-96P-201ENST00000459535 64 ntBASIC0.42□□□□□ -2.34
LINC00477Q96M19 AC107297.1-201ENST00000459991 176 ntBASIC0.42□□□□□ -2.34
LINC00477Q96M19 RNU6-1219P-201ENST00000516143 112 ntBASIC0.42□□□□□ -2.34
LINC00477Q96M19 RNU6-1149P-201ENST00000516810 97 ntBASIC0.42□□□□□ -2.34
LINC00477Q96M19 AC018659.1-201ENST00000551083 169 ntBASIC0.42□□□□□ -2.34
LINC00477Q96M19 CYP3A137P-201ENST00000562436 69 ntBASIC0.42□□□□□ -2.34
LINC00477Q96M19 MIR4714-201ENST00000580728 77 ntBASIC0.42□□□□□ -2.34
LINC00477Q96M19 MIR3149-201ENST00000584629 83 ntBASIC0.42□□□□□ -2.34
LINC00477Q96M19 AP000753.3-201ENST00000604083 169 ntBASIC0.42□□□□□ -2.34
LINC00477Q96M19 MIR8070-201ENST00000616510 88 ntBASIC0.42□□□□□ -2.34
LINC00477Q96M19 Y_RNA.224-201ENST00000364308 111 ntBASIC0.41□□□□□ -2.34
LINC00477Q96M19 RNU6-818P-201ENST00000364837 108 ntBASIC0.41□□□□□ -2.34
LINC00477Q96M19 Y_RNA.410-201ENST00000383992 113 ntBASIC0.41□□□□□ -2.34
LINC00477Q96M19 SNORD38B-201ENST00000384690 67 ntBASIC0.41□□□□□ -2.34
LINC00477Q96M19 RNU6-1067P-201ENST00000384752 107 ntBASIC0.41□□□□□ -2.34
LINC00477Q96M19 RNU6-1237P-201ENST00000384777 107 ntBASIC0.41□□□□□ -2.34
LINC00477Q96M19 MIR573-201ENST00000384964 99 ntBASIC0.41□□□□□ -2.34
LINC00477Q96M19 AL157398.1-201ENST00000452981 186 ntBASIC0.41□□□□□ -2.34
LINC00477Q96M19 RNU7-185P-201ENST00000459215 60 ntBASIC0.41□□□□□ -2.34
LINC00477Q96M19 RNU6-1023P-201ENST00000516137 106 ntBASIC0.41□□□□□ -2.34
LINC00477Q96M19 RNU4-54P-201ENST00000516428 129 ntBASIC0.41□□□□□ -2.34
LINC00477Q96M19 MIR378D2-201ENST00000580636 98 ntBASIC0.41□□□□□ -2.34
LINC00477Q96M19 AL078603.1-201ENST00000603824 313 ntBASIC0.41□□□□□ -2.34
LINC00477Q96M19 U4.1-201ENST00000620349 87 ntBASIC0.41□□□□□ -2.34
LINC00477Q96M19 SNORD38B-202ENST00000625943 69 ntBASIC0.41□□□□□ -2.34
LINC00477Q96M19 MIR6841-201ENST00000637129 72 ntBASIC0.41□□□□□ -2.34
LINC00477Q96M19 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
LINC00477Q96M19 RNY1-201ENST00000364228 113 ntBASIC0.4□□□□□ -2.35
LINC00477Q96M19 Y_RNA.242-201ENST00000364473 110 ntBASIC0.4□□□□□ -2.35
LINC00477Q96M19 RNU6-643P-201ENST00000384018 107 ntBASIC0.4□□□□□ -2.35
LINC00477Q96M19 Y_RNA.452-201ENST00000384202 108 ntBASIC0.4□□□□□ -2.35
LINC00477Q96M19 RNU6-196P-201ENST00000384315 107 ntBASIC0.4□□□□□ -2.35
LINC00477Q96M19 RNU6-342P-201ENST00000384521 104 ntBASIC0.4□□□□□ -2.35
LINC00477Q96M19 RNU6-768P-201ENST00000384683 107 ntBASIC0.4□□□□□ -2.35
LINC00477Q96M19 AL078595.1-201ENST00000404458 226 ntBASIC0.4□□□□□ -2.35
LINC00477Q96M19 RNU5E-9P-201ENST00000411164 104 ntBASIC0.4□□□□□ -2.35
LINC00477Q96M19 RNU7-102P-201ENST00000458948 62 ntBASIC0.4□□□□□ -2.35
LINC00477Q96M19 Y_RNA.797-201ENST00000515977 94 ntBASIC0.4□□□□□ -2.35
LINC00477Q96M19 RNU6-977P-201ENST00000516411 103 ntBASIC0.4□□□□□ -2.35
LINC00477Q96M19 RNU6-229P-201ENST00000516614 102 ntBASIC0.4□□□□□ -2.35
LINC00477Q96M19 RNU7-53P-201ENST00000516705 60 ntBASIC0.4□□□□□ -2.35
LINC00477Q96M19 RNU2-60P-201ENST00000517290 128 ntBASIC0.4□□□□□ -2.35
LINC00477Q96M19 MIR4452-201ENST00000583004 71 ntBASIC0.4□□□□□ -2.35
LINC00477Q96M19 MIR6504-201ENST00000613520 61 ntBASIC0.4□□□□□ -2.35
LINC00477Q96M19 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.4□□□□□ -2.35
LINC00477Q96M19 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.4□□□□□ -2.35
LINC00477Q96M19 MIR411-201ENST00000362239 96 ntBASIC0.39□□□□□ -2.35
LINC00477Q96M19 MIR18A-201ENST00000362310 71 ntBASIC0.39□□□□□ -2.35
LINC00477Q96M19 Y_RNA.144-201ENST00000363521 113 ntBASIC0.39□□□□□ -2.35
LINC00477Q96M19 Y_RNA.171-201ENST00000363760 102 ntBASIC0.39□□□□□ -2.35
LINC00477Q96M19 RNU6-275P-201ENST00000364910 107 ntBASIC0.39□□□□□ -2.35
LINC00477Q96M19 RNU6-702P-201ENST00000364982 107 ntBASIC0.39□□□□□ -2.35
LINC00477Q96M19 RNU6-945P-201ENST00000383947 107 ntBASIC0.39□□□□□ -2.35
LINC00477Q96M19 Y_RNA.542-201ENST00000384641 111 ntBASIC0.39□□□□□ -2.35
LINC00477Q96M19 MIR499A-201ENST00000384903 122 ntBASIC0.39□□□□□ -2.35
LINC00477Q96M19 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
LINC00477Q96M19 U8.15-201ENST00000390947 134 ntBASIC0.39□□□□□ -2.35
LINC00477Q96M19 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.39□□□□□ -2.35
LINC00477Q96M19 MIR3612-201ENST00000579753 87 ntBASIC0.39□□□□□ -2.35
LINC00477Q96M19 MIR8066-201ENST00000617280 78 ntBASIC0.39□□□□□ -2.35
LINC00477Q96M19 AC078938.1-201ENST00000620993 318 ntBASIC0.39□□□□□ -2.35
LINC00477Q96M19 MIR3658-201ENST00000636291 56 ntBASIC0.39□□□□□ -2.35
LINC00477Q96M19 U6.104-201ENST00000637979 90 ntBASIC0.39□□□□□ -2.35
LINC00477Q96M19 RNU6-103P-201ENST00000363686 107 ntBASIC0.38□□□□□ -2.35
LINC00477Q96M19 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
LINC00477Q96M19 RNU6-1292P-201ENST00000383856 107 ntBASIC0.38□□□□□ -2.35
LINC00477Q96M19 SNORA36.2-201ENST00000384004 127 ntBASIC0.38□□□□□ -2.35
LINC00477Q96M19 Y_RNA.470-201ENST00000384307 117 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms