Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
MS4A3Q96HJ5 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
MS4A3Q96HJ5 RNU1-91P-201ENST00000364746 163 ntBASIC3.34□□□□□ -1.87
MS4A3Q96HJ5 AL359511.1-201ENST00000402970 211 ntBASIC3.34□□□□□ -1.87
MS4A3Q96HJ5 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.34□□□□□ -1.87
MS4A3Q96HJ5 TRBV12-2-201ENST00000489763 344 ntBASIC3.34□□□□□ -1.87
MS4A3Q96HJ5 MIR4738-201ENST00000579134 87 ntBASIC3.34□□□□□ -1.87
MS4A3Q96HJ5 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.34□□□□□ -1.87
MS4A3Q96HJ5 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
MS4A3Q96HJ5 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
MS4A3Q96HJ5 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
MS4A3Q96HJ5 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
MS4A3Q96HJ5 MIR199A2-201ENST00000385289 110 ntBASIC3.33□□□□□ -1.88
MS4A3Q96HJ5 AC105272.1-201ENST00000438604 198 ntBASIC3.33□□□□□ -1.88
MS4A3Q96HJ5 RNA5SP208-201ENST00000516156 78 ntBASIC3.33□□□□□ -1.88
MS4A3Q96HJ5 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.33□□□□□ -1.88
MS4A3Q96HJ5 AC087499.8-201ENST00000578406 226 ntBASIC3.33□□□□□ -1.88
MS4A3Q96HJ5 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
MS4A3Q96HJ5 RNA5SP50-201ENST00000363731 107 ntBASIC3.32□□□□□ -1.88
MS4A3Q96HJ5 RNU6-520P-201ENST00000384717 104 ntBASIC3.32□□□□□ -1.88
MS4A3Q96HJ5 SNORA3.3-201ENST00000408712 125 ntBASIC3.32□□□□□ -1.88
MS4A3Q96HJ5 AC003982.1-202ENST00000469928 248 ntBASIC3.32□□□□□ -1.88
MS4A3Q96HJ5 MIR6082-201ENST00000613604 109 ntBASIC3.32□□□□□ -1.88
MS4A3Q96HJ5 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
MS4A3Q96HJ5 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
MS4A3Q96HJ5 RNU6-495P-201ENST00000362995 107 ntBASIC3.31□□□□□ -1.88
MS4A3Q96HJ5 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
MS4A3Q96HJ5 MIR591-201ENST00000385290 95 ntBASIC3.31□□□□□ -1.88
MS4A3Q96HJ5 SNORA75.1-201ENST00000391130 148 ntBASIC3.31□□□□□ -1.88
MS4A3Q96HJ5 RNA5SP501-201ENST00000410990 112 ntBASIC3.31□□□□□ -1.88
MS4A3Q96HJ5 RNA5SP344-201ENST00000411081 104 ntBASIC3.31□□□□□ -1.88
MS4A3Q96HJ5 RNU6-287P-201ENST00000516230 98 ntBASIC3.31□□□□□ -1.88
MS4A3Q96HJ5 SNRPGP19-201ENST00000603826 189 ntBASIC3.31□□□□□ -1.88
MS4A3Q96HJ5 RNVU1-4-201ENST00000612985 164 ntBASIC3.31□□□□□ -1.88
MS4A3Q96HJ5 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.31□□□□□ -1.88
MS4A3Q96HJ5 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
MS4A3Q96HJ5 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
MS4A3Q96HJ5 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
MS4A3Q96HJ5 RNU6-360P-201ENST00000390944 104 ntBASIC3.3□□□□□ -1.88
MS4A3Q96HJ5 RN7SL601P-201ENST00000471221 293 ntBASIC3.3□□□□□ -1.88
MS4A3Q96HJ5 RNU6-765P-201ENST00000516916 99 ntBASIC3.3□□□□□ -1.88
MS4A3Q96HJ5 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.3□□□□□ -1.88
MS4A3Q96HJ5 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
MS4A3Q96HJ5 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.3□□□□□ -1.88
MS4A3Q96HJ5 Y_RNA.13-201ENST00000362403 112 ntBASIC3.29□□□□□ -1.88
MS4A3Q96HJ5 SNORD115-44-201ENST00000365391 82 ntBASIC3.29□□□□□ -1.88
MS4A3Q96HJ5 MIR134-201ENST00000385258 73 ntBASIC3.29□□□□□ -1.88
MS4A3Q96HJ5 SNORD41-201ENST00000386967 70 ntBASIC3.29□□□□□ -1.88
MS4A3Q96HJ5 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC3.29□□□□□ -1.88
MS4A3Q96HJ5 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.29□□□□□ -1.88
MS4A3Q96HJ5 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.29□□□□□ -1.88
MS4A3Q96HJ5 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
MS4A3Q96HJ5 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
MS4A3Q96HJ5 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.29□□□□□ -1.88
MS4A3Q96HJ5 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
MS4A3Q96HJ5 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
MS4A3Q96HJ5 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.28□□□□□ -1.88
MS4A3Q96HJ5 RNU1-148P-201ENST00000384472 162 ntBASIC3.28□□□□□ -1.88
MS4A3Q96HJ5 MIR203A-201ENST00000384836 110 ntBASIC3.28□□□□□ -1.88
MS4A3Q96HJ5 MIR518A2-201ENST00000384966 87 ntBASIC3.28□□□□□ -1.88
MS4A3Q96HJ5 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
MS4A3Q96HJ5 SNORA57.3-201ENST00000411095 141 ntBASIC3.28□□□□□ -1.88
MS4A3Q96HJ5 IGLVVI-22-1-201ENST00000521183 211 ntBASIC3.28□□□□□ -1.88
MS4A3Q96HJ5 MIR4425-201ENST00000580572 84 ntBASIC3.28□□□□□ -1.88
MS4A3Q96HJ5 AL137849.1-201ENST00000604767 169 ntBASIC3.28□□□□□ -1.88
MS4A3Q96HJ5 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
MS4A3Q96HJ5 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
MS4A3Q96HJ5 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.27□□□□□ -1.89
MS4A3Q96HJ5 RNU6-580P-201ENST00000365159 107 ntBASIC3.27□□□□□ -1.89
MS4A3Q96HJ5 MIR7-2-201ENST00000384970 110 ntBASIC3.27□□□□□ -1.89
MS4A3Q96HJ5 MIR216B-201ENST00000390186 82 ntBASIC3.27□□□□□ -1.89
MS4A3Q96HJ5 RN7SL542P-201ENST00000467147 294 ntBASIC3.27□□□□□ -1.89
MS4A3Q96HJ5 RNU6-1089P-201ENST00000516473 104 ntBASIC3.27□□□□□ -1.89
MS4A3Q96HJ5 RNA5SP164-201ENST00000516533 110 ntBASIC3.27□□□□□ -1.89
MS4A3Q96HJ5 MIR548AD-201ENST00000584780 82 ntBASIC3.27□□□□□ -1.89
MS4A3Q96HJ5 MIR3657-201ENST00000584818 117 ntBASIC3.27□□□□□ -1.89
MS4A3Q96HJ5 5S_rRNA.15-201ENST00000611169 127 ntBASIC3.27□□□□□ -1.89
MS4A3Q96HJ5 MIR6516-201ENST00000630554 81 ntBASIC3.27□□□□□ -1.89
MS4A3Q96HJ5 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
MS4A3Q96HJ5 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
MS4A3Q96HJ5 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
MS4A3Q96HJ5 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
MS4A3Q96HJ5 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
MS4A3Q96HJ5 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
MS4A3Q96HJ5 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.26□□□□□ -1.89
MS4A3Q96HJ5 RNU6-203P-201ENST00000384038 104 ntBASIC3.26□□□□□ -1.89
MS4A3Q96HJ5 MIR554-201ENST00000384874 96 ntBASIC3.26□□□□□ -1.89
MS4A3Q96HJ5 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
MS4A3Q96HJ5 AC004965.1-201ENST00000413033 213 ntBASIC3.26□□□□□ -1.89
MS4A3Q96HJ5 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.26□□□□□ -1.89
MS4A3Q96HJ5 RNA5SP124-201ENST00000362739 110 ntBASIC3.25□□□□□ -1.89
MS4A3Q96HJ5 MIR194-1-201ENST00000384892 85 ntBASIC3.25□□□□□ -1.89
MS4A3Q96HJ5 MIR1289-1-201ENST00000408836 144 ntBASIC3.25□□□□□ -1.89
MS4A3Q96HJ5 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.25□□□□□ -1.89
MS4A3Q96HJ5 RNU6-902P-201ENST00000517212 91 ntBASIC3.25□□□□□ -1.89
MS4A3Q96HJ5 AC008011.1-201ENST00000545989 227 ntBASIC3.25□□□□□ -1.89
MS4A3Q96HJ5 NAMPTP3-201ENST00000569273 224 ntBASIC3.25□□□□□ -1.89
MS4A3Q96HJ5 AL121772.2-201ENST00000614331 297 ntBASIC3.25□□□□□ -1.89
MS4A3Q96HJ5 AL162274.2-201ENST00000614406 332 ntBASIC3.25□□□□□ -1.89
MS4A3Q96HJ5 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms