Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 RNU1-112P-201ENST00000364401 164 ntBASIC2.97□□□□□ -1.93
HLA-CQ95604 SNORD115-27-201ENST00000364430 82 ntBASIC2.97□□□□□ -1.93
HLA-CQ95604 RNY1P13-201ENST00000365030 105 ntBASIC2.97□□□□□ -1.93
HLA-CQ95604 MIR181B2-201ENST00000385004 89 ntBASIC2.97□□□□□ -1.93
HLA-CQ95604 UBBP3-201ENST00000445497 241 ntBASIC2.97□□□□□ -1.93
HLA-CQ95604 AC139453.2-201ENST00000487255 133 ntBASIC2.97□□□□□ -1.93
HLA-CQ95604 AC140658.3-201ENST00000567603 271 ntBASIC2.97□□□□□ -1.93
HLA-CQ95604 MIR3935-201ENST00000583472 104 ntBASIC2.97□□□□□ -1.93
HLA-CQ95604 MIR4251-201ENST00000635819 61 ntBASIC2.97□□□□□ -1.93
HLA-CQ95604 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.97□□□□□ -1.93
HLA-CQ95604 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-CQ95604 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.96□□□□□ -1.94
HLA-CQ95604 RNY1P2-201ENST00000364820 117 ntBASIC2.96□□□□□ -1.94
HLA-CQ95604 SNORA2B-201ENST00000384583 137 ntBASIC2.96□□□□□ -1.94
HLA-CQ95604 MIR653-201ENST00000385279 96 ntBASIC2.96□□□□□ -1.94
HLA-CQ95604 RNA5SP237-201ENST00000410414 113 ntBASIC2.96□□□□□ -1.94
HLA-CQ95604 AL591806.2-201ENST00000433122 173 ntBASIC2.96□□□□□ -1.94
HLA-CQ95604 RN7SL442P-201ENST00000473804 320 ntBASIC2.96□□□□□ -1.94
HLA-CQ95604 RPS29P11-201ENST00000496507 171 ntBASIC2.96□□□□□ -1.94
HLA-CQ95604 RNU6-548P-201ENST00000517083 115 ntBASIC2.96□□□□□ -1.94
HLA-CQ95604 AC105081.1-201ENST00000617727 106 ntBASIC2.96□□□□□ -1.94
HLA-CQ95604 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.95□□□□□ -1.94
HLA-CQ95604 RNA5SP133-201ENST00000363368 119 ntBASIC2.95□□□□□ -1.94
HLA-CQ95604 SNORD56.5-201ENST00000364281 72 ntBASIC2.95□□□□□ -1.94
HLA-CQ95604 RNU6-519P-201ENST00000410590 108 ntBASIC2.95□□□□□ -1.94
HLA-CQ95604 RNA5SP21-201ENST00000410917 96 ntBASIC2.95□□□□□ -1.94
HLA-CQ95604 Z98742.3-201ENST00000418637 326 ntBASIC2.95□□□□□ -1.94
HLA-CQ95604 AC003982.1-202ENST00000469928 248 ntBASIC2.95□□□□□ -1.94
HLA-CQ95604 RN7SL20P-201ENST00000488827 297 ntBASIC2.95□□□□□ -1.94
HLA-CQ95604 RNU6-917P-201ENST00000516294 104 ntBASIC2.95□□□□□ -1.94
HLA-CQ95604 AC141846.1-201ENST00000568348 142 ntBASIC2.95□□□□□ -1.94
HLA-CQ95604 MIR548AO-201ENST00000579992 96 ntBASIC2.95□□□□□ -1.94
HLA-CQ95604 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
HLA-CQ95604 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-CQ95604 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-CQ95604 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
HLA-CQ95604 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-CQ95604 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-CQ95604 RNA5SP48-201ENST00000363969 126 ntBASIC2.94□□□□□ -1.94
HLA-CQ95604 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
HLA-CQ95604 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.94□□□□□ -1.94
HLA-CQ95604 MIR1236-201ENST00000408340 102 ntBASIC2.94□□□□□ -1.94
HLA-CQ95604 RNA5SP100-201ENST00000410903 110 ntBASIC2.94□□□□□ -1.94
HLA-CQ95604 RNA5SP59-201ENST00000410922 110 ntBASIC2.94□□□□□ -1.94
HLA-CQ95604 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.94□□□□□ -1.94
HLA-CQ95604 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-CQ95604 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.94□□□□□ -1.94
HLA-CQ95604 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.94□□□□□ -1.94
HLA-CQ95604 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-CQ95604 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-CQ95604 WWP1P1-201ENST00000466609 2769 ntBASIC2.93□□□□□ -1.94
HLA-CQ95604 RNU6-788P-201ENST00000390967 104 ntBASIC2.93□□□□□ -1.94
HLA-CQ95604 RNA5SP425-201ENST00000410336 112 ntBASIC2.93□□□□□ -1.94
HLA-CQ95604 RNA5SP385-201ENST00000515947 110 ntBASIC2.93□□□□□ -1.94
HLA-CQ95604 AL662814.1-201ENST00000617364 121 ntBASIC2.93□□□□□ -1.94
HLA-CQ95604 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.93□□□□□ -1.94
HLA-CQ95604 RNU6-949P-201ENST00000384040 107 ntBASIC2.92□□□□□ -1.94
HLA-CQ95604 MIR764-201ENST00000390811 85 ntBASIC2.92□□□□□ -1.94
HLA-CQ95604 RNA5SP274-201ENST00000410484 108 ntBASIC2.92□□□□□ -1.94
HLA-CQ95604 RNA5SP270-201ENST00000411361 118 ntBASIC2.92□□□□□ -1.94
HLA-CQ95604 MIR4648-201ENST00000580107 72 ntBASIC2.92□□□□□ -1.94
HLA-CQ95604 MIR4506-201ENST00000584693 77 ntBASIC2.92□□□□□ -1.94
HLA-CQ95604 AL512598.1-201ENST00000610158 273 ntBASIC2.92□□□□□ -1.94
HLA-CQ95604 AC145423.2-201ENST00000610631 239 ntBASIC2.92□□□□□ -1.94
HLA-CQ95604 MIR8066-201ENST00000617280 78 ntBASIC2.92□□□□□ -1.94
HLA-CQ95604 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
HLA-CQ95604 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.91□□□□□ -1.94
HLA-CQ95604 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.91□□□□□ -1.94
HLA-CQ95604 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.91□□□□□ -1.94
HLA-CQ95604 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.91□□□□□ -1.94
HLA-CQ95604 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HLA-CQ95604 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
HLA-CQ95604 MIR1289-2-201ENST00000408360 111 ntBASIC2.9□□□□□ -1.95
HLA-CQ95604 SNORA31.15-201ENST00000516771 132 ntBASIC2.9□□□□□ -1.95
HLA-CQ95604 AC073476.4-201ENST00000628409 72 ntBASIC2.9□□□□□ -1.95
HLA-CQ95604 MIR30E-201ENST00000362104 92 ntBASIC2.89□□□□□ -1.95
HLA-CQ95604 MIR194-1-201ENST00000384892 85 ntBASIC2.89□□□□□ -1.95
HLA-CQ95604 RNU4-53P-201ENST00000410828 140 ntBASIC2.89□□□□□ -1.95
HLA-CQ95604 AC087499.7-201ENST00000441958 109 ntBASIC2.89□□□□□ -1.95
HLA-CQ95604 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.89□□□□□ -1.95
HLA-CQ95604 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.89□□□□□ -1.95
HLA-CQ95604 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.89□□□□□ -1.95
HLA-CQ95604 RNA5SP99-201ENST00000364020 114 ntBASIC2.88□□□□□ -1.95
HLA-CQ95604 RNU6-129P-201ENST00000391022 107 ntBASIC2.88□□□□□ -1.95
HLA-CQ95604 SNRPGP12-201ENST00000449481 213 ntBASIC2.88□□□□□ -1.95
HLA-CQ95604 RNU6-56P-201ENST00000516986 93 ntBASIC2.88□□□□□ -1.95
HLA-CQ95604 AC020891.4-201ENST00000605745 93 ntBASIC2.88□□□□□ -1.95
HLA-CQ95604 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
HLA-CQ95604 RNU6-571P-201ENST00000384128 107 ntBASIC2.87□□□□□ -1.95
HLA-CQ95604 RNU6-1237P-201ENST00000384777 107 ntBASIC2.87□□□□□ -1.95
HLA-CQ95604 AC004965.1-201ENST00000413033 213 ntBASIC2.87□□□□□ -1.95
HLA-CQ95604 snoU13.2-201ENST00000459201 104 ntBASIC2.87□□□□□ -1.95
HLA-CQ95604 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.87□□□□□ -1.95
HLA-CQ95604 SNORA31.17-201ENST00000516953 127 ntBASIC2.87□□□□□ -1.95
HLA-CQ95604 MIR4529-201ENST00000578110 78 ntBASIC2.87□□□□□ -1.95
HLA-CQ95604 U7.4-201ENST00000614961 63 ntBASIC2.87□□□□□ -1.95
HLA-CQ95604 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
HLA-CQ95604 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-CQ95604 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
HLA-CQ95604 RNA5SP450-201ENST00000411206 102 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms