Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 MIR3169-201ENST00000578032 83 ntBASIC3.31□□□□□ -1.88
NKX2-3Q8TAU0 SNORD53-201ENST00000579969 78 ntBASIC3.31□□□□□ -1.88
NKX2-3Q8TAU0 SNORD14A-201ENST00000606526 91 ntBASIC3.31□□□□□ -1.88
NKX2-3Q8TAU0 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
NKX2-3Q8TAU0 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
NKX2-3Q8TAU0 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NKX2-3Q8TAU0 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.3□□□□□ -1.88
NKX2-3Q8TAU0 RNU6-859P-201ENST00000362728 107 ntBASIC3.3□□□□□ -1.88
NKX2-3Q8TAU0 RNU6-1019P-201ENST00000364424 107 ntBASIC3.3□□□□□ -1.88
NKX2-3Q8TAU0 MIR9-1-201ENST00000385198 89 ntBASIC3.3□□□□□ -1.88
NKX2-3Q8TAU0 SNORD28B-201ENST00000390993 75 ntBASIC3.3□□□□□ -1.88
NKX2-3Q8TAU0 RNU6-1108P-201ENST00000516308 104 ntBASIC3.3□□□□□ -1.88
NKX2-3Q8TAU0 AP000753.3-201ENST00000604083 169 ntBASIC3.3□□□□□ -1.88
NKX2-3Q8TAU0 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC3.3□□□□□ -1.88
NKX2-3Q8TAU0 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
NKX2-3Q8TAU0 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
NKX2-3Q8TAU0 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NKX2-3Q8TAU0 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
NKX2-3Q8TAU0 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NKX2-3Q8TAU0 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
NKX2-3Q8TAU0 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.28□□□□□ -1.88
NKX2-3Q8TAU0 MIR627-201ENST00000384979 97 ntBASIC3.28□□□□□ -1.88
NKX2-3Q8TAU0 SNORD77.2-201ENST00000391045 68 ntBASIC3.28□□□□□ -1.88
NKX2-3Q8TAU0 AC074348.1-201ENST00000426503 132 ntBASIC3.28□□□□□ -1.88
NKX2-3Q8TAU0 AC093850.1-201ENST00000454121 251 ntBASIC3.28□□□□□ -1.88
NKX2-3Q8TAU0 snoU13.23-201ENST00000458863 104 ntBASIC3.28□□□□□ -1.88
NKX2-3Q8TAU0 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.89
NKX2-3Q8TAU0 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
NKX2-3Q8TAU0 MIR512-1-201ENST00000384913 84 ntBASIC3.27□□□□□ -1.89
NKX2-3Q8TAU0 RNA5SP385-201ENST00000515947 110 ntBASIC3.27□□□□□ -1.89
NKX2-3Q8TAU0 Y_RNA.676-201ENST00000516393 96 ntBASIC3.27□□□□□ -1.89
NKX2-3Q8TAU0 RNU6-303P-201ENST00000517091 106 ntBASIC3.27□□□□□ -1.89
NKX2-3Q8TAU0 MIR4484-201ENST00000582855 83 ntBASIC3.27□□□□□ -1.89
NKX2-3Q8TAU0 MIR4506-201ENST00000584693 77 ntBASIC3.27□□□□□ -1.89
NKX2-3Q8TAU0 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.27□□□□□ -1.89
NKX2-3Q8TAU0 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NKX2-3Q8TAU0 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
NKX2-3Q8TAU0 AC245060.5-201ENST00000610778 3293 ntBASIC3.26□□□□□ -1.89
NKX2-3Q8TAU0 RNY1P2-201ENST00000364820 117 ntBASIC3.26□□□□□ -1.89
NKX2-3Q8TAU0 MIR635-201ENST00000384830 98 ntBASIC3.26□□□□□ -1.89
NKX2-3Q8TAU0 AL138827.1-201ENST00000402666 306 ntBASIC3.26□□□□□ -1.89
NKX2-3Q8TAU0 RN7SKP123-201ENST00000410732 291 ntBASIC3.26□□□□□ -1.89
NKX2-3Q8TAU0 AC022513.1-201ENST00000624512 117 ntBASIC3.26□□□□□ -1.89
NKX2-3Q8TAU0 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NKX2-3Q8TAU0 RNA5SP68-201ENST00000363885 119 ntBASIC3.25□□□□□ -1.89
NKX2-3Q8TAU0 RNU6-499P-201ENST00000365615 107 ntBASIC3.25□□□□□ -1.89
NKX2-3Q8TAU0 RNU6-811P-201ENST00000384069 107 ntBASIC3.25□□□□□ -1.89
NKX2-3Q8TAU0 Y_RNA.596-201ENST00000410462 109 ntBASIC3.25□□□□□ -1.89
NKX2-3Q8TAU0 AC093423.1-201ENST00000440817 142 ntBASIC3.25□□□□□ -1.89
NKX2-3Q8TAU0 SNRPGP12-201ENST00000449481 213 ntBASIC3.25□□□□□ -1.89
NKX2-3Q8TAU0 DEFB122-202ENST00000569013 197 ntBASIC3.25□□□□□ -1.89
NKX2-3Q8TAU0 AC005786.1-201ENST00000588553 154 ntBASIC3.25□□□□□ -1.89
NKX2-3Q8TAU0 MIR6817-201ENST00000615588 66 ntBASIC3.25□□□□□ -1.89
NKX2-3Q8TAU0 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NKX2-3Q8TAU0 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
NKX2-3Q8TAU0 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
NKX2-3Q8TAU0 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
NKX2-3Q8TAU0 ZNF658B-202ENST00000615961 3375 ntBASIC3.24□□□□□ -1.89
NKX2-3Q8TAU0 RNU6-23P-201ENST00000363283 107 ntBASIC3.24□□□□□ -1.89
NKX2-3Q8TAU0 SNORA38-201ENST00000363946 132 ntBASIC3.24□□□□□ -1.89
NKX2-3Q8TAU0 RNY1P13-201ENST00000365030 105 ntBASIC3.24□□□□□ -1.89
NKX2-3Q8TAU0 HSPE1P9-201ENST00000440046 311 ntBASIC3.24□□□□□ -1.89
NKX2-3Q8TAU0 AC069114.2-201ENST00000604699 304 ntBASIC3.24□□□□□ -1.89
NKX2-3Q8TAU0 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.24□□□□□ -1.89
NKX2-3Q8TAU0 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC3.24□□□□□ -1.89
NKX2-3Q8TAU0 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.24□□□□□ -1.89
NKX2-3Q8TAU0 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.24□□□□□ -1.89
NKX2-3Q8TAU0 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NKX2-3Q8TAU0 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NKX2-3Q8TAU0 SNORA67.4-201ENST00000384688 142 ntBASIC3.23□□□□□ -1.89
NKX2-3Q8TAU0 RNU6-141P-201ENST00000410499 105 ntBASIC3.23□□□□□ -1.89
NKX2-3Q8TAU0 RPL23AP6-201ENST00000446637 472 ntBASIC3.23□□□□□ -1.89
NKX2-3Q8TAU0 SNORA18.5-201ENST00000516616 101 ntBASIC3.23□□□□□ -1.89
NKX2-3Q8TAU0 AC133485.1-201ENST00000567176 124 ntBASIC3.23□□□□□ -1.89
NKX2-3Q8TAU0 AL357312.1-201ENST00000603879 298 ntBASIC3.23□□□□□ -1.89
NKX2-3Q8TAU0 RNU6-482P-201ENST00000391068 107 ntBASIC3.22□□□□□ -1.89
NKX2-3Q8TAU0 RNU6-663P-201ENST00000391105 106 ntBASIC3.22□□□□□ -1.89
NKX2-3Q8TAU0 RNU4-83P-201ENST00000410863 133 ntBASIC3.22□□□□□ -1.89
NKX2-3Q8TAU0 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.89
NKX2-3Q8TAU0 RNU6-1031P-201ENST00000384773 107 ntBASIC3.21□□□□□ -1.9
NKX2-3Q8TAU0 RNA5SP292-201ENST00000390974 118 ntBASIC3.21□□□□□ -1.9
NKX2-3Q8TAU0 AC092427.1-202ENST00000430569 476 ntBASIC3.21□□□□□ -1.9
NKX2-3Q8TAU0 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.21□□□□□ -1.9
NKX2-3Q8TAU0 MIR664A-201ENST00000626086 82 ntBASIC3.21□□□□□ -1.9
NKX2-3Q8TAU0 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NKX2-3Q8TAU0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
NKX2-3Q8TAU0 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.21□□□□□ -1.9
NKX2-3Q8TAU0 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.2□□□□□ -1.9
NKX2-3Q8TAU0 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.2□□□□□ -1.9
NKX2-3Q8TAU0 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NKX2-3Q8TAU0 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.2□□□□□ -1.9
NKX2-3Q8TAU0 RNU6-1241P-201ENST00000384536 107 ntBASIC3.2□□□□□ -1.9
NKX2-3Q8TAU0 SNORA3.2-201ENST00000408221 125 ntBASIC3.2□□□□□ -1.9
NKX2-3Q8TAU0 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.2□□□□□ -1.9
NKX2-3Q8TAU0 Z96811.1-201ENST00000445880 108 ntBASIC3.2□□□□□ -1.9
NKX2-3Q8TAU0 MIR4536-1-201ENST00000583537 88 ntBASIC3.2□□□□□ -1.9
NKX2-3Q8TAU0 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NKX2-3Q8TAU0 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
NKX2-3Q8TAU0 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
NKX2-3Q8TAU0 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 188.6 ms