Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 RNU6-482P-201ENST00000391068 107 ntBASIC2.92□□□□□ -1.94
PTCRAQ6ISU1 RNA5SP237-201ENST00000410414 113 ntBASIC2.92□□□□□ -1.94
PTCRAQ6ISU1 HMGN1P18-201ENST00000457642 277 ntBASIC2.92□□□□□ -1.94
PTCRAQ6ISU1 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PTCRAQ6ISU1 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
PTCRAQ6ISU1 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PTCRAQ6ISU1 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.91□□□□□ -1.94
PTCRAQ6ISU1 RNA5SP247-201ENST00000411181 105 ntBASIC2.91□□□□□ -1.94
PTCRAQ6ISU1 AL591806.2-201ENST00000433122 173 ntBASIC2.91□□□□□ -1.94
PTCRAQ6ISU1 AC141846.1-201ENST00000568348 142 ntBASIC2.91□□□□□ -1.94
PTCRAQ6ISU1 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PTCRAQ6ISU1 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.9□□□□□ -1.94
PTCRAQ6ISU1 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
PTCRAQ6ISU1 Y_RNA.57-201ENST00000362806 113 ntBASIC2.9□□□□□ -1.95
PTCRAQ6ISU1 RNU6-478P-201ENST00000363904 110 ntBASIC2.9□□□□□ -1.95
PTCRAQ6ISU1 MIR764-201ENST00000390811 85 ntBASIC2.9□□□□□ -1.95
PTCRAQ6ISU1 Z98742.3-201ENST00000418637 326 ntBASIC2.9□□□□□ -1.95
PTCRAQ6ISU1 snoU13.11-201ENST00000459219 104 ntBASIC2.9□□□□□ -1.95
PTCRAQ6ISU1 SNORA64.4-201ENST00000516632 81 ntBASIC2.9□□□□□ -1.95
PTCRAQ6ISU1 MIR548AO-201ENST00000579992 96 ntBASIC2.9□□□□□ -1.95
PTCRAQ6ISU1 MIR3935-201ENST00000583472 104 ntBASIC2.9□□□□□ -1.95
PTCRAQ6ISU1 MIR7153-201ENST00000637758 57 ntBASIC2.9□□□□□ -1.95
PTCRAQ6ISU1 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
PTCRAQ6ISU1 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PTCRAQ6ISU1 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
PTCRAQ6ISU1 SNORD56.3-201ENST00000363507 71 ntBASIC2.89□□□□□ -1.95
PTCRAQ6ISU1 RNU1-51P-201ENST00000365345 176 ntBASIC2.89□□□□□ -1.95
PTCRAQ6ISU1 SNORA40.18-201ENST00000391200 128 ntBASIC2.89□□□□□ -1.95
PTCRAQ6ISU1 RNA5SP274-201ENST00000410484 108 ntBASIC2.89□□□□□ -1.95
PTCRAQ6ISU1 RNU6-548P-201ENST00000517083 115 ntBASIC2.89□□□□□ -1.95
PTCRAQ6ISU1 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.89□□□□□ -1.95
PTCRAQ6ISU1 U1.36-201ENST00000620684 176 ntBASIC2.89□□□□□ -1.95
PTCRAQ6ISU1 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.89□□□□□ -1.95
PTCRAQ6ISU1 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
PTCRAQ6ISU1 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PTCRAQ6ISU1 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.88□□□□□ -1.95
PTCRAQ6ISU1 RNU4-32P-201ENST00000363404 141 ntBASIC2.88□□□□□ -1.95
PTCRAQ6ISU1 SNORA38-201ENST00000363946 132 ntBASIC2.88□□□□□ -1.95
PTCRAQ6ISU1 AC092185.1-201ENST00000491371 97 ntBASIC2.88□□□□□ -1.95
PTCRAQ6ISU1 MIR4251-201ENST00000635819 61 ntBASIC2.88□□□□□ -1.95
PTCRAQ6ISU1 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
PTCRAQ6ISU1 AC093831.2-201ENST00000624393 3427 ntBASIC2.88□□□□□ -1.95
PTCRAQ6ISU1 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
PTCRAQ6ISU1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.87□□□□□ -1.95
PTCRAQ6ISU1 RNU6-949P-201ENST00000384040 107 ntBASIC2.87□□□□□ -1.95
PTCRAQ6ISU1 MIR1289-2-201ENST00000408360 111 ntBASIC2.87□□□□□ -1.95
PTCRAQ6ISU1 RNA5SP425-201ENST00000410336 112 ntBASIC2.87□□□□□ -1.95
PTCRAQ6ISU1 RNA5SP501-201ENST00000410990 112 ntBASIC2.87□□□□□ -1.95
PTCRAQ6ISU1 Z96811.1-201ENST00000445880 108 ntBASIC2.87□□□□□ -1.95
PTCRAQ6ISU1 AL450471.1-201ENST00000447509 127 ntBASIC2.87□□□□□ -1.95
PTCRAQ6ISU1 RNU1-143P-201ENST00000516296 146 ntBASIC2.87□□□□□ -1.95
PTCRAQ6ISU1 SCARNA20.6-201ENST00000517251 106 ntBASIC2.87□□□□□ -1.95
PTCRAQ6ISU1 MIR4648-201ENST00000580107 72 ntBASIC2.87□□□□□ -1.95
PTCRAQ6ISU1 U1.23-201ENST00000610293 146 ntBASIC2.87□□□□□ -1.95
PTCRAQ6ISU1 RNU1-68P-201ENST00000615382 146 ntBASIC2.87□□□□□ -1.95
PTCRAQ6ISU1 AL662814.1-201ENST00000617364 121 ntBASIC2.87□□□□□ -1.95
PTCRAQ6ISU1 U1.39-201ENST00000621562 146 ntBASIC2.87□□□□□ -1.95
PTCRAQ6ISU1 AC073476.4-201ENST00000628409 72 ntBASIC2.87□□□□□ -1.95
PTCRAQ6ISU1 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.87□□□□□ -1.95
PTCRAQ6ISU1 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PTCRAQ6ISU1 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
PTCRAQ6ISU1 MIR148B-201ENST00000362252 99 ntBASIC2.86□□□□□ -1.95
PTCRAQ6ISU1 RNU6-1123P-201ENST00000362347 106 ntBASIC2.86□□□□□ -1.95
PTCRAQ6ISU1 RNU6-686P-201ENST00000364839 107 ntBASIC2.86□□□□□ -1.95
PTCRAQ6ISU1 RNU6-805P-201ENST00000365643 106 ntBASIC2.86□□□□□ -1.95
PTCRAQ6ISU1 Y_RNA.648-201ENST00000459455 110 ntBASIC2.86□□□□□ -1.95
PTCRAQ6ISU1 Y_RNA.660-201ENST00000516002 120 ntBASIC2.86□□□□□ -1.95
PTCRAQ6ISU1 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PTCRAQ6ISU1 RNA5SP289-201ENST00000362332 137 ntBASIC2.85□□□□□ -1.95
PTCRAQ6ISU1 RNU1-138P-201ENST00000384093 164 ntBASIC2.85□□□□□ -1.95
PTCRAQ6ISU1 Y_RNA.508-201ENST00000384502 114 ntBASIC2.85□□□□□ -1.95
PTCRAQ6ISU1 RNU6-360P-201ENST00000390944 104 ntBASIC2.85□□□□□ -1.95
PTCRAQ6ISU1 HMGN2P39-201ENST00000398005 273 ntBASIC2.85□□□□□ -1.95
PTCRAQ6ISU1 RNU4-53P-201ENST00000410828 140 ntBASIC2.85□□□□□ -1.95
PTCRAQ6ISU1 AC027119.1-201ENST00000440877 241 ntBASIC2.85□□□□□ -1.95
PTCRAQ6ISU1 SNRPGP12-201ENST00000449481 213 ntBASIC2.85□□□□□ -1.95
PTCRAQ6ISU1 RNU6-523P-201ENST00000516304 54 ntBASIC2.85□□□□□ -1.95
PTCRAQ6ISU1 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PTCRAQ6ISU1 WWP1P1-201ENST00000466609 2769 ntBASIC2.84□□□□□ -1.95
PTCRAQ6ISU1 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
PTCRAQ6ISU1 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
PTCRAQ6ISU1 MIRLET7A1-201ENST00000362295 80 ntBASIC2.84□□□□□ -1.95
PTCRAQ6ISU1 RNA5SP99-201ENST00000364020 114 ntBASIC2.84□□□□□ -1.95
PTCRAQ6ISU1 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.84□□□□□ -1.95
PTCRAQ6ISU1 RNA5SP217-201ENST00000515959 91 ntBASIC2.84□□□□□ -1.95
PTCRAQ6ISU1 RNU6-322P-201ENST00000516010 103 ntBASIC2.84□□□□□ -1.95
PTCRAQ6ISU1 RNU6-917P-201ENST00000516294 104 ntBASIC2.84□□□□□ -1.95
PTCRAQ6ISU1 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
PTCRAQ6ISU1 AL021368.2-201ENST00000606125 5352 ntBASIC2.83□□□□□ -1.96
PTCRAQ6ISU1 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PTCRAQ6ISU1 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
PTCRAQ6ISU1 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
PTCRAQ6ISU1 SNORA63.2-201ENST00000362603 126 ntBASIC2.83□□□□□ -1.96
PTCRAQ6ISU1 RNA5SP383-201ENST00000362934 120 ntBASIC2.83□□□□□ -1.96
PTCRAQ6ISU1 SNORA25.9-201ENST00000365087 128 ntBASIC2.83□□□□□ -1.96
PTCRAQ6ISU1 RNU6-571P-201ENST00000384128 107 ntBASIC2.83□□□□□ -1.96
PTCRAQ6ISU1 RPS27P29-201ENST00000463110 252 ntBASIC2.83□□□□□ -1.96
PTCRAQ6ISU1 AC004223.1-201ENST00000479840 271 ntBASIC2.83□□□□□ -1.96
PTCRAQ6ISU1 AC090897.1-201ENST00000580909 226 ntBASIC2.83□□□□□ -1.96
PTCRAQ6ISU1 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms