Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 MIR548AR-201ENST00000582191 57 ntBASIC2.63□□□□□ -1.99
RSPO4Q2I0M5 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.63□□□□□ -1.99
RSPO4Q2I0M5 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.63□□□□□ -1.99
RSPO4Q2I0M5 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
RSPO4Q2I0M5 SNORD115-31-201ENST00000365318 82 ntBASIC2.62□□□□□ -1.99
RSPO4Q2I0M5 RNU6-805P-201ENST00000365643 106 ntBASIC2.62□□□□□ -1.99
RSPO4Q2I0M5 MIR1262-201ENST00000408276 93 ntBASIC2.62□□□□□ -1.99
RSPO4Q2I0M5 RNA5SP274-201ENST00000410484 108 ntBASIC2.62□□□□□ -1.99
RSPO4Q2I0M5 RNU4-83P-201ENST00000410863 133 ntBASIC2.62□□□□□ -1.99
RSPO4Q2I0M5 AL356320.1-201ENST00000429616 163 ntBASIC2.62□□□□□ -1.99
RSPO4Q2I0M5 AC245517.4-201ENST00000448601 281 ntBASIC2.62□□□□□ -1.99
RSPO4Q2I0M5 snoU13.16-201ENST00000459350 104 ntBASIC2.62□□□□□ -1.99
RSPO4Q2I0M5 RPS29P11-201ENST00000496507 171 ntBASIC2.62□□□□□ -1.99
RSPO4Q2I0M5 AC245166.1-201ENST00000521012 253 ntBASIC2.62□□□□□ -1.99
RSPO4Q2I0M5 MIR3186-201ENST00000577404 85 ntBASIC2.62□□□□□ -1.99
RSPO4Q2I0M5 AC005520.4-201ENST00000604337 90 ntBASIC2.62□□□□□ -1.99
RSPO4Q2I0M5 AC110079.1-202ENST00000635213 138 ntBASIC2.62□□□□□ -1.99
RSPO4Q2I0M5 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
RSPO4Q2I0M5 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
RSPO4Q2I0M5 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.61□□□□□ -1.99
RSPO4Q2I0M5 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RSPO4Q2I0M5 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.61□□□□□ -1.99
RSPO4Q2I0M5 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RSPO4Q2I0M5 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RSPO4Q2I0M5 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RSPO4Q2I0M5 RNU6-1072P-201ENST00000384703 107 ntBASIC2.61□□□□□ -1.99
RSPO4Q2I0M5 RNU6-443P-201ENST00000384780 107 ntBASIC2.61□□□□□ -1.99
RSPO4Q2I0M5 MIR561-201ENST00000385216 97 ntBASIC2.61□□□□□ -1.99
RSPO4Q2I0M5 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
RSPO4Q2I0M5 RNU6-1053P-201ENST00000515930 101 ntBASIC2.61□□□□□ -1.99
RSPO4Q2I0M5 RNU7-12P-201ENST00000516030 62 ntBASIC2.61□□□□□ -1.99
RSPO4Q2I0M5 SNORA31.10-201ENST00000516482 106 ntBASIC2.61□□□□□ -1.99
RSPO4Q2I0M5 SNORA18.5-201ENST00000516616 101 ntBASIC2.61□□□□□ -1.99
RSPO4Q2I0M5 AP000753.3-201ENST00000604083 169 ntBASIC2.61□□□□□ -1.99
RSPO4Q2I0M5 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RSPO4Q2I0M5 AP000648.3-201ENST00000623539 4507 ntBASIC2.61□□□□□ -1.99
RSPO4Q2I0M5 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
RSPO4Q2I0M5 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
RSPO4Q2I0M5 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RSPO4Q2I0M5 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.61□□□□□ -1.99
RSPO4Q2I0M5 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
RSPO4Q2I0M5 RNU6-208P-201ENST00000362431 107 ntBASIC2.6□□□□□ -1.99
RSPO4Q2I0M5 Y_RNA.537-201ENST00000384626 109 ntBASIC2.6□□□□□ -1.99
RSPO4Q2I0M5 AC093850.1-201ENST00000454121 251 ntBASIC2.6□□□□□ -1.99
RSPO4Q2I0M5 RPS27P29-201ENST00000463110 252 ntBASIC2.6□□□□□ -1.99
RSPO4Q2I0M5 RN7SL499P-201ENST00000481141 276 ntBASIC2.6□□□□□ -1.99
RSPO4Q2I0M5 AC018868.1-201ENST00000491307 315 ntBASIC2.6□□□□□ -1.99
RSPO4Q2I0M5 RNA5SP168-201ENST00000516642 112 ntBASIC2.6□□□□□ -1.99
RSPO4Q2I0M5 MIR4781-201ENST00000585250 76 ntBASIC2.6□□□□□ -1.99
RSPO4Q2I0M5 AL355297.2-201ENST00000604792 129 ntBASIC2.6□□□□□ -1.99
RSPO4Q2I0M5 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.6□□□□□ -1.99
RSPO4Q2I0M5 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.6□□□□□ -1.99
RSPO4Q2I0M5 MIR7153-201ENST00000637758 57 ntBASIC2.6□□□□□ -1.99
RSPO4Q2I0M5 MIR7515-201ENST00000637837 67 ntBASIC2.6□□□□□ -1.99
RSPO4Q2I0M5 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
RSPO4Q2I0M5 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.6□□□□□ -1.99
RSPO4Q2I0M5 Y_RNA.355-201ENST00000365462 98 ntBASIC2.59□□□□□ -1.99
RSPO4Q2I0M5 AC244636.1-201ENST00000421152 228 ntBASIC2.59□□□□□ -1.99
RSPO4Q2I0M5 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RSPO4Q2I0M5 SNORD123-201ENST00000459473 70 ntBASIC2.59□□□□□ -1.99
RSPO4Q2I0M5 RPS29P12-201ENST00000460178 152 ntBASIC2.59□□□□□ -1.99
RSPO4Q2I0M5 SNORD14A-201ENST00000606526 91 ntBASIC2.59□□□□□ -1.99
RSPO4Q2I0M5 AC067747.1-201ENST00000608026 250 ntBASIC2.59□□□□□ -1.99
RSPO4Q2I0M5 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.59□□□□□ -2
RSPO4Q2I0M5 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.58□□□□□ -2
RSPO4Q2I0M5 RNY1P13-201ENST00000365030 105 ntBASIC2.58□□□□□ -2
RSPO4Q2I0M5 RNU6-1067P-201ENST00000384752 107 ntBASIC2.58□□□□□ -2
RSPO4Q2I0M5 AC015818.7-201ENST00000428754 109 ntBASIC2.58□□□□□ -2
RSPO4Q2I0M5 AC133485.1-201ENST00000567176 124 ntBASIC2.58□□□□□ -2
RSPO4Q2I0M5 MIR1273D-201ENST00000577266 86 ntBASIC2.58□□□□□ -2
RSPO4Q2I0M5 AP000942.3-201ENST00000603702 160 ntBASIC2.58□□□□□ -2
RSPO4Q2I0M5 Z97988.1-201ENST00000637697 135 ntBASIC2.58□□□□□ -2
RSPO4Q2I0M5 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RSPO4Q2I0M5 AL161431.1-201ENST00000618966 4205 ntBASIC2.58□□□□□ -2
RSPO4Q2I0M5 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
RSPO4Q2I0M5 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.58□□□□□ -2
RSPO4Q2I0M5 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RSPO4Q2I0M5 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.57□□□□□ -2
RSPO4Q2I0M5 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.57□□□□□ -2
RSPO4Q2I0M5 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.57□□□□□ -2
RSPO4Q2I0M5 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
RSPO4Q2I0M5 RNA5SP493-201ENST00000364115 91 ntBASIC2.57□□□□□ -2
RSPO4Q2I0M5 SNORA72.6-201ENST00000384520 129 ntBASIC2.57□□□□□ -2
RSPO4Q2I0M5 RNU6-205P-201ENST00000390858 107 ntBASIC2.57□□□□□ -2
RSPO4Q2I0M5 AL034345.1-201ENST00000407768 123 ntBASIC2.57□□□□□ -2
RSPO4Q2I0M5 SNORA11.4-201ENST00000408823 129 ntBASIC2.57□□□□□ -2
RSPO4Q2I0M5 HSPE1P9-201ENST00000440046 311 ntBASIC2.57□□□□□ -2
RSPO4Q2I0M5 RPL23AP6-201ENST00000446637 472 ntBASIC2.57□□□□□ -2
RSPO4Q2I0M5 SNRPGP12-201ENST00000449481 213 ntBASIC2.57□□□□□ -2
RSPO4Q2I0M5 AC023790.1-201ENST00000482174 347 ntBASIC2.57□□□□□ -2
RSPO4Q2I0M5 RN7SL633P-201ENST00000488974 297 ntBASIC2.57□□□□□ -2
RSPO4Q2I0M5 RNA5SP320-201ENST00000516263 124 ntBASIC2.57□□□□□ -2
RSPO4Q2I0M5 MIR4536-1-201ENST00000583537 88 ntBASIC2.57□□□□□ -2
RSPO4Q2I0M5 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.57□□□□□ -2
RSPO4Q2I0M5 U4.3-201ENST00000621047 82 ntBASIC2.57□□□□□ -2
RSPO4Q2I0M5 SNORA50A-202ENST00000629536 136 ntBASIC2.57□□□□□ -2
RSPO4Q2I0M5 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
RSPO4Q2I0M5 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RSPO4Q2I0M5 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.57□□□□□ -2
RSPO4Q2I0M5 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 200.2 ms