Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 MTATP6P29-201ENST00000415057 132 ntBASIC1.47□□□□□ -2.17
LTBQ06643 SNORD123-201ENST00000459473 70 ntBASIC1.47□□□□□ -2.17
LTBQ06643 RPS29P24-201ENST00000486345 171 ntBASIC1.47□□□□□ -2.17
LTBQ06643 AC008834.1-201ENST00000511612 175 ntBASIC1.47□□□□□ -2.17
LTBQ06643 RNU6-998P-201ENST00000515894 101 ntBASIC1.47□□□□□ -2.17
LTBQ06643 RNU2-13P-201ENST00000515909 113 ntBASIC1.47□□□□□ -2.17
LTBQ06643 RNU6-919P-201ENST00000516731 104 ntBASIC1.47□□□□□ -2.17
LTBQ06643 MIR4255-201ENST00000579351 72 ntBASIC1.47□□□□□ -2.17
LTBQ06643 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.46□□□□□ -2.18
LTBQ06643 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
LTBQ06643 RNU6-1123P-201ENST00000362347 106 ntBASIC1.46□□□□□ -2.18
LTBQ06643 Y_RNA.346-201ENST00000365385 112 ntBASIC1.46□□□□□ -2.18
LTBQ06643 RNY1P6-201ENST00000384193 109 ntBASIC1.46□□□□□ -2.18
LTBQ06643 Y_RNA.528-201ENST00000384575 108 ntBASIC1.46□□□□□ -2.18
LTBQ06643 MIR548A1-201ENST00000385041 97 ntBASIC1.46□□□□□ -2.18
LTBQ06643 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
LTBQ06643 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.46□□□□□ -2.18
LTBQ06643 RPL31P63-201ENST00000422565 375 ntBASIC1.46□□□□□ -2.18
LTBQ06643 SNORD53B-201ENST00000577887 78 ntBASIC1.46□□□□□ -2.18
LTBQ06643 AL670379.3-201ENST00000605040 251 ntBASIC1.46□□□□□ -2.18
LTBQ06643 SNORA7.1-201ENST00000363750 139 ntBASIC1.45□□□□□ -2.18
LTBQ06643 RNU4-16P-201ENST00000364737 141 ntBASIC1.45□□□□□ -2.18
LTBQ06643 Y_RNA.454-201ENST00000384224 113 ntBASIC1.45□□□□□ -2.18
LTBQ06643 MIR548A3-201ENST00000385297 97 ntBASIC1.45□□□□□ -2.18
LTBQ06643 MT-TI-201ENST00000387365 69 ntBASIC1.45□□□□□ -2.18
LTBQ06643 RNY4P18-201ENST00000391107 89 ntBASIC1.45□□□□□ -2.18
LTBQ06643 MIR934-201ENST00000401241 83 ntBASIC1.45□□□□□ -2.18
LTBQ06643 Y_RNA.649-201ENST00000459077 103 ntBASIC1.45□□□□□ -2.18
LTBQ06643 RNU2-11P-201ENST00000459191 187 ntBASIC1.45□□□□□ -2.18
LTBQ06643 RNU7-45P-201ENST00000459460 63 ntBASIC1.45□□□□□ -2.18
LTBQ06643 RNU7-96P-201ENST00000459535 64 ntBASIC1.45□□□□□ -2.18
LTBQ06643 RNU6-958P-201ENST00000516995 106 ntBASIC1.45□□□□□ -2.18
LTBQ06643 AC021443.1-201ENST00000604478 211 ntBASIC1.45□□□□□ -2.18
LTBQ06643 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.45□□□□□ -2.18
LTBQ06643 AL157834.3-201ENST00000615543 103 ntBASIC1.45□□□□□ -2.18
LTBQ06643 AC022709.1-201ENST00000615967 87 ntBASIC1.45□□□□□ -2.18
LTBQ06643 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.45□□□□□ -2.18
LTBQ06643 AL121890.5-201ENST00000620848 304 ntBASIC1.45□□□□□ -2.18
LTBQ06643 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.44□□□□□ -2.18
LTBQ06643 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.44□□□□□ -2.18
LTBQ06643 Y_RNA.35-201ENST00000362601 101 ntBASIC1.44□□□□□ -2.18
LTBQ06643 SNORA1.2-201ENST00000365189 134 ntBASIC1.44□□□□□ -2.18
LTBQ06643 RNU6-342P-201ENST00000384521 104 ntBASIC1.44□□□□□ -2.18
LTBQ06643 RNU6-1104P-201ENST00000384723 104 ntBASIC1.44□□□□□ -2.18
LTBQ06643 MIR30A-201ENST00000385092 71 ntBASIC1.44□□□□□ -2.18
LTBQ06643 AL035398.1-201ENST00000430869 322 ntBASIC1.44□□□□□ -2.18
LTBQ06643 JTBP1-201ENST00000441314 247 ntBASIC1.44□□□□□ -2.18
LTBQ06643 AC107297.1-201ENST00000459991 176 ntBASIC1.44□□□□□ -2.18
LTBQ06643 RNU2-35P-201ENST00000516446 142 ntBASIC1.44□□□□□ -2.18
LTBQ06643 RNU6-589P-201ENST00000516485 107 ntBASIC1.44□□□□□ -2.18
LTBQ06643 RNY4P20-201ENST00000516678 93 ntBASIC1.44□□□□□ -2.18
LTBQ06643 SNORA74.3-201ENST00000517108 154 ntBASIC1.44□□□□□ -2.18
LTBQ06643 SNORA77B-201ENST00000578179 125 ntBASIC1.44□□□□□ -2.18
LTBQ06643 MIR4285-201ENST00000581001 85 ntBASIC1.44□□□□□ -2.18
LTBQ06643 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.44□□□□□ -2.18
LTBQ06643 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
LTBQ06643 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.44□□□□□ -2.18
LTBQ06643 MIR302B-201ENST00000362188 73 ntBASIC1.43□□□□□ -2.18
LTBQ06643 SNORA63.4-201ENST00000362763 126 ntBASIC1.43□□□□□ -2.18
LTBQ06643 Y_RNA.298-201ENST00000364960 107 ntBASIC1.43□□□□□ -2.18
LTBQ06643 SNORD116-21-201ENST00000384507 92 ntBASIC1.43□□□□□ -2.18
LTBQ06643 MIR653-201ENST00000385279 96 ntBASIC1.43□□□□□ -2.18
LTBQ06643 RNA5SP136-201ENST00000410906 107 ntBASIC1.43□□□□□ -2.18
LTBQ06643 RNU7-67P-201ENST00000459003 62 ntBASIC1.43□□□□□ -2.18
LTBQ06643 Y_RNA.709-201ENST00000516952 92 ntBASIC1.43□□□□□ -2.18
LTBQ06643 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.43□□□□□ -2.18
LTBQ06643 MIR4305-201ENST00000583252 102 ntBASIC1.43□□□□□ -2.18
LTBQ06643 PVT1_3.1-201ENST00000620853 95 ntBASIC1.43□□□□□ -2.18
LTBQ06643 RNU6-414P-201ENST00000363705 104 ntBASIC1.42□□□□□ -2.18
LTBQ06643 RNU1-42P-201ENST00000364033 160 ntBASIC1.42□□□□□ -2.18
LTBQ06643 Y_RNA.205-201ENST00000364128 113 ntBASIC1.42□□□□□ -2.18
LTBQ06643 SNORA24-201ENST00000384096 131 ntBASIC1.42□□□□□ -2.18
LTBQ06643 MIR513A1-201ENST00000385138 129 ntBASIC1.42□□□□□ -2.18
LTBQ06643 RNU6-913P-201ENST00000390913 95 ntBASIC1.42□□□□□ -2.18
LTBQ06643 RNU6-1190P-201ENST00000410811 104 ntBASIC1.42□□□□□ -2.18
LTBQ06643 POLR2J4-204ENST00000418424 324 ntBASIC1.42□□□□□ -2.18
LTBQ06643 RPS29P29-201ENST00000456396 171 ntBASIC1.42□□□□□ -2.18
LTBQ06643 RNU7-164P-201ENST00000459221 62 ntBASIC1.42□□□□□ -2.18
LTBQ06643 RNU7-123P-201ENST00000515911 60 ntBASIC1.42□□□□□ -2.18
LTBQ06643 RNU1-92P-201ENST00000517017 135 ntBASIC1.42□□□□□ -2.18
LTBQ06643 AC022523.2-201ENST00000561045 150 ntBASIC1.42□□□□□ -2.18
LTBQ06643 MIR4791-201ENST00000607666 84 ntBASIC1.42□□□□□ -2.18
LTBQ06643 AC243994.1-201ENST00000618627 109 ntBASIC1.42□□□□□ -2.18
LTBQ06643 AC021613.1-201ENST00000623880 111 ntBASIC1.42□□□□□ -2.18
LTBQ06643 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.42□□□□□ -2.18
LTBQ06643 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
LTBQ06643 RNA5SP259-201ENST00000365541 109 ntBASIC1.41□□□□□ -2.18
LTBQ06643 RNA5SP144-201ENST00000410846 116 ntBASIC1.41□□□□□ -2.18
LTBQ06643 COX6CP6-201ENST00000490840 228 ntBASIC1.41□□□□□ -2.18
LTBQ06643 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.41□□□□□ -2.18
LTBQ06643 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.41□□□□□ -2.18
LTBQ06643 AL645939.4-201ENST00000604495 135 ntBASIC1.41□□□□□ -2.18
LTBQ06643 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.41□□□□□ -2.18
LTBQ06643 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.41□□□□□ -2.18
LTBQ06643 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
LTBQ06643 Y_RNA.198-201ENST00000364013 98 ntBASIC1.4□□□□□ -2.19
LTBQ06643 SNORA22-201ENST00000383907 134 ntBASIC1.4□□□□□ -2.19
LTBQ06643 Y_RNA.537-201ENST00000384626 109 ntBASIC1.4□□□□□ -2.19
LTBQ06643 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
LTBQ06643 SNORA26.6-201ENST00000391256 115 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms