Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 RNU7-123P-201ENST00000515911 60 ntBASIC1.68□□□□□ -2.14
PROM1O43490 MIR3618-201ENST00000580330 88 ntBASIC1.68□□□□□ -2.14
PROM1O43490 MIR4422-201ENST00000581938 83 ntBASIC1.68□□□□□ -2.14
PROM1O43490 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
PROM1O43490 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
PROM1O43490 Y_RNA.35-201ENST00000362601 101 ntBASIC1.67□□□□□ -2.14
PROM1O43490 Y_RNA.355-201ENST00000365462 98 ntBASIC1.67□□□□□ -2.14
PROM1O43490 MIR499A-201ENST00000384903 122 ntBASIC1.67□□□□□ -2.14
PROM1O43490 snoU13.9-201ENST00000458927 103 ntBASIC1.67□□□□□ -2.14
PROM1O43490 SNORD13-201ENST00000459299 104 ntBASIC1.67□□□□□ -2.14
PROM1O43490 snoU13.18-201ENST00000459483 104 ntBASIC1.67□□□□□ -2.14
PROM1O43490 RNA5SP445-201ENST00000515889 115 ntBASIC1.67□□□□□ -2.14
PROM1O43490 SNORA25.15-201ENST00000516487 89 ntBASIC1.67□□□□□ -2.14
PROM1O43490 RNU7-43P-201ENST00000516554 64 ntBASIC1.67□□□□□ -2.14
PROM1O43490 RNU6-922P-201ENST00000516753 99 ntBASIC1.67□□□□□ -2.14
PROM1O43490 Y_RNA.709-201ENST00000516952 92 ntBASIC1.67□□□□□ -2.14
PROM1O43490 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.67□□□□□ -2.14
PROM1O43490 MIR4764-201ENST00000580680 88 ntBASIC1.67□□□□□ -2.14
PROM1O43490 MIR8081-201ENST00000611533 95 ntBASIC1.67□□□□□ -2.14
PROM1O43490 MIR8063-201ENST00000621930 81 ntBASIC1.67□□□□□ -2.14
PROM1O43490 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.67□□□□□ -2.14
PROM1O43490 SNORA63.4-201ENST00000362763 126 ntBASIC1.66□□□□□ -2.14
PROM1O43490 RNY1P10-201ENST00000363268 113 ntBASIC1.66□□□□□ -2.14
PROM1O43490 SNORA22-201ENST00000383907 134 ntBASIC1.66□□□□□ -2.14
PROM1O43490 RNU6-880P-201ENST00000384526 107 ntBASIC1.66□□□□□ -2.14
PROM1O43490 Y_RNA.537-201ENST00000384626 109 ntBASIC1.66□□□□□ -2.14
PROM1O43490 AL022718.1-201ENST00000412004 84 ntBASIC1.66□□□□□ -2.14
PROM1O43490 AL161935.2-201ENST00000414627 60 ntBASIC1.66□□□□□ -2.14
PROM1O43490 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.66□□□□□ -2.14
PROM1O43490 RNU2-13P-201ENST00000515909 113 ntBASIC1.66□□□□□ -2.14
PROM1O43490 SNORA31.4-201ENST00000516049 129 ntBASIC1.66□□□□□ -2.14
PROM1O43490 RNU2-35P-201ENST00000516446 142 ntBASIC1.66□□□□□ -2.14
PROM1O43490 MIR3683-201ENST00000580847 82 ntBASIC1.66□□□□□ -2.14
PROM1O43490 MIR8070-201ENST00000616510 88 ntBASIC1.66□□□□□ -2.14
PROM1O43490 AC008133.2-201ENST00000624540 351 ntBASIC1.66□□□□□ -2.14
PROM1O43490 Y_RNA.198-201ENST00000364013 98 ntBASIC1.65□□□□□ -2.15
PROM1O43490 RNY4P18-201ENST00000391107 89 ntBASIC1.65□□□□□ -2.15
PROM1O43490 RNU6-1190P-201ENST00000410811 104 ntBASIC1.65□□□□□ -2.15
PROM1O43490 TRMT112P2-201ENST00000512910 132 ntBASIC1.65□□□□□ -2.15
PROM1O43490 RNU6-589P-201ENST00000516485 107 ntBASIC1.65□□□□□ -2.15
PROM1O43490 AC022523.2-201ENST00000561045 150 ntBASIC1.65□□□□□ -2.15
PROM1O43490 MIR3152-201ENST00000579801 74 ntBASIC1.65□□□□□ -2.15
PROM1O43490 AL359821.1-201ENST00000605519 182 ntBASIC1.65□□□□□ -2.15
PROM1O43490 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
PROM1O43490 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.64□□□□□ -2.15
PROM1O43490 SNORD48-201ENST00000364953 64 ntBASIC1.64□□□□□ -2.15
PROM1O43490 SNORA25.9-201ENST00000365087 128 ntBASIC1.64□□□□□ -2.15
PROM1O43490 SNORA24-201ENST00000384096 131 ntBASIC1.64□□□□□ -2.15
PROM1O43490 RNU6-913P-201ENST00000390913 95 ntBASIC1.64□□□□□ -2.15
PROM1O43490 RNU1-78P-201ENST00000391248 165 ntBASIC1.64□□□□□ -2.15
PROM1O43490 RNA5SP144-201ENST00000410846 116 ntBASIC1.64□□□□□ -2.15
PROM1O43490 SNORD111.1-201ENST00000516421 86 ntBASIC1.64□□□□□ -2.15
PROM1O43490 DNAJC19P9-201ENST00000555084 351 ntBASIC1.64□□□□□ -2.15
PROM1O43490 AC007012.1-201ENST00000567192 175 ntBASIC1.64□□□□□ -2.15
PROM1O43490 MIR4255-201ENST00000579351 72 ntBASIC1.64□□□□□ -2.15
PROM1O43490 AC084768.2-201ENST00000622736 221 ntBASIC1.64□□□□□ -2.15
PROM1O43490 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.64□□□□□ -2.15
PROM1O43490 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.64□□□□□ -2.15
PROM1O43490 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.63□□□□□ -2.15
PROM1O43490 MIR653-201ENST00000385279 96 ntBASIC1.63□□□□□ -2.15
PROM1O43490 RNU6-1319P-201ENST00000390855 104 ntBASIC1.63□□□□□ -2.15
PROM1O43490 RNU6-747P-201ENST00000390928 104 ntBASIC1.63□□□□□ -2.15
PROM1O43490 RNU6-241P-201ENST00000391148 104 ntBASIC1.63□□□□□ -2.15
PROM1O43490 RNU4-62P-201ENST00000410125 130 ntBASIC1.63□□□□□ -2.15
PROM1O43490 RNA5SP261-201ENST00000410536 106 ntBASIC1.63□□□□□ -2.15
PROM1O43490 RNU6-177P-201ENST00000411257 104 ntBASIC1.63□□□□□ -2.15
PROM1O43490 AP1B1P2-201ENST00000416196 106 ntBASIC1.63□□□□□ -2.15
PROM1O43490 HMGN1P33-201ENST00000432945 451 ntBASIC1.63□□□□□ -2.15
PROM1O43490 RNU7-73P-201ENST00000458743 63 ntBASIC1.63□□□□□ -2.15
PROM1O43490 snoU13.16-201ENST00000459350 104 ntBASIC1.63□□□□□ -2.15
PROM1O43490 SNORA77B-201ENST00000578179 125 ntBASIC1.63□□□□□ -2.15
PROM1O43490 AL020996.3-201ENST00000606617 222 ntBASIC1.63□□□□□ -2.15
PROM1O43490 SNORA22.1-201ENST00000362701 134 ntBASIC1.62□□□□□ -2.15
PROM1O43490 RNU6-1104P-201ENST00000384723 104 ntBASIC1.62□□□□□ -2.15
PROM1O43490 AL512326.2-201ENST00000426359 151 ntBASIC1.62□□□□□ -2.15
PROM1O43490 HSPE1P24-201ENST00000450782 238 ntBASIC1.62□□□□□ -2.15
PROM1O43490 RNU6-893P-201ENST00000458841 100 ntBASIC1.62□□□□□ -2.15
PROM1O43490 RNU7-113P-201ENST00000459273 62 ntBASIC1.62□□□□□ -2.15
PROM1O43490 AC005908.1-201ENST00000468701 347 ntBASIC1.62□□□□□ -2.15
PROM1O43490 PDCD5P2-201ENST00000507570 312 ntBASIC1.62□□□□□ -2.15
PROM1O43490 RNU6-250P-201ENST00000516958 103 ntBASIC1.62□□□□□ -2.15
PROM1O43490 AC015688.6-201ENST00000577737 104 ntBASIC1.62□□□□□ -2.15
PROM1O43490 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.62□□□□□ -2.15
PROM1O43490 MIR4251-201ENST00000635819 61 ntBASIC1.62□□□□□ -2.15
PROM1O43490 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.61□□□□□ -2.15
PROM1O43490 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
PROM1O43490 Y_RNA.116-201ENST00000363292 103 ntBASIC1.61□□□□□ -2.15
PROM1O43490 RNY4P6-201ENST00000363667 96 ntBASIC1.61□□□□□ -2.15
PROM1O43490 Y_RNA.171-201ENST00000363760 102 ntBASIC1.61□□□□□ -2.15
PROM1O43490 SNORA1.1-201ENST00000364671 133 ntBASIC1.61□□□□□ -2.15
PROM1O43490 SNORD41-201ENST00000386967 70 ntBASIC1.61□□□□□ -2.15
PROM1O43490 MT-TI-201ENST00000387365 69 ntBASIC1.61□□□□□ -2.15
PROM1O43490 POLR2J4-204ENST00000418424 324 ntBASIC1.61□□□□□ -2.15
PROM1O43490 RNU7-41P-201ENST00000515917 61 ntBASIC1.61□□□□□ -2.15
PROM1O43490 RNU6-947P-201ENST00000516264 106 ntBASIC1.61□□□□□ -2.15
PROM1O43490 RNU6-970P-201ENST00000516312 107 ntBASIC1.61□□□□□ -2.15
PROM1O43490 RNU6-412P-201ENST00000516434 106 ntBASIC1.61□□□□□ -2.15
PROM1O43490 AC004812.1-201ENST00000540773 146 ntBASIC1.61□□□□□ -2.15
PROM1O43490 MIR3163-201ENST00000581592 73 ntBASIC1.61□□□□□ -2.15
PROM1O43490 MIR6717-201ENST00000622747 73 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms