Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 MIR3935-201ENST00000583472 104 ntBASIC1.7□□□□□ -2.14
HOXA3O43365 MIR3192-201ENST00000584920 77 ntBASIC1.7□□□□□ -2.14
HOXA3O43365 AL627230.6-201ENST00000611129 280 ntBASIC1.7□□□□□ -2.14
HOXA3O43365 WWP1P1-201ENST00000466609 2769 ntBASIC1.69□□□□□ -2.14
HOXA3O43365 RNA5SP99-201ENST00000364020 114 ntBASIC1.69□□□□□ -2.14
HOXA3O43365 U8.6-201ENST00000364939 135 ntBASIC1.69□□□□□ -2.14
HOXA3O43365 Y_RNA.354-201ENST00000365448 111 ntBASIC1.69□□□□□ -2.14
HOXA3O43365 MIR30A-201ENST00000385092 71 ntBASIC1.69□□□□□ -2.14
HOXA3O43365 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
HOXA3O43365 SNORA48.3-201ENST00000391081 134 ntBASIC1.69□□□□□ -2.14
HOXA3O43365 MIR1302-5-201ENST00000408164 150 ntBASIC1.69□□□□□ -2.14
HOXA3O43365 AC090844.1-201ENST00000422019 156 ntBASIC1.69□□□□□ -2.14
HOXA3O43365 AC005908.1-201ENST00000468701 347 ntBASIC1.69□□□□□ -2.14
HOXA3O43365 SNORD111.1-201ENST00000516421 86 ntBASIC1.69□□□□□ -2.14
HOXA3O43365 RNU6-548P-201ENST00000517083 115 ntBASIC1.69□□□□□ -2.14
HOXA3O43365 MIR548AE2-201ENST00000583456 67 ntBASIC1.69□□□□□ -2.14
HOXA3O43365 GHRLOS.1-201ENST00000610995 70 ntBASIC1.69□□□□□ -2.14
HOXA3O43365 Y_RNA.163-201ENST00000363702 113 ntBASIC1.68□□□□□ -2.14
HOXA3O43365 SNORD1A-201ENST00000364968 72 ntBASIC1.68□□□□□ -2.14
HOXA3O43365 Y_RNA.309-201ENST00000365046 111 ntBASIC1.68□□□□□ -2.14
HOXA3O43365 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.68□□□□□ -2.14
HOXA3O43365 RNU6-602P-201ENST00000411155 105 ntBASIC1.68□□□□□ -2.14
HOXA3O43365 HSPE1P24-201ENST00000450782 238 ntBASIC1.68□□□□□ -2.14
HOXA3O43365 AC009474.2-201ENST00000451383 136 ntBASIC1.68□□□□□ -2.14
HOXA3O43365 RPS27P21-201ENST00000486977 252 ntBASIC1.68□□□□□ -2.14
HOXA3O43365 Y_RNA.676-201ENST00000516393 96 ntBASIC1.68□□□□□ -2.14
HOXA3O43365 RNU6-250P-201ENST00000516958 103 ntBASIC1.68□□□□□ -2.14
HOXA3O43365 SNORA44.1-201ENST00000517031 108 ntBASIC1.68□□□□□ -2.14
HOXA3O43365 AL357312.1-201ENST00000603879 298 ntBASIC1.68□□□□□ -2.14
HOXA3O43365 Y_RNA.773-201ENST00000607168 90 ntBASIC1.68□□□□□ -2.14
HOXA3O43365 AL096861.1-201ENST00000610899 123 ntBASIC1.68□□□□□ -2.14
HOXA3O43365 AL162726.3-218ENST00000636401 95 ntBASIC1.68□□□□□ -2.14
HOXA3O43365 RNU6-816P-201ENST00000390914 107 ntBASIC1.67□□□□□ -2.14
HOXA3O43365 RNU6-1268P-201ENST00000391214 107 ntBASIC1.67□□□□□ -2.14
HOXA3O43365 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.67□□□□□ -2.14
HOXA3O43365 RNU6-1239P-201ENST00000391310 107 ntBASIC1.67□□□□□ -2.14
HOXA3O43365 AC019129.1-201ENST00000403786 261 ntBASIC1.67□□□□□ -2.14
HOXA3O43365 AC079804.2-201ENST00000490376 200 ntBASIC1.67□□□□□ -2.14
HOXA3O43365 RNU6-947P-201ENST00000516264 106 ntBASIC1.67□□□□□ -2.14
HOXA3O43365 RNU1-40P-201ENST00000516816 164 ntBASIC1.67□□□□□ -2.14
HOXA3O43365 RNU1-97P-201ENST00000516872 164 ntBASIC1.67□□□□□ -2.14
HOXA3O43365 CYP3A52P-201ENST00000563326 91 ntBASIC1.67□□□□□ -2.14
HOXA3O43365 MIR6840-201ENST00000611937 71 ntBASIC1.67□□□□□ -2.14
HOXA3O43365 AL353997.5-201ENST00000618886 171 ntBASIC1.67□□□□□ -2.14
HOXA3O43365 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.67□□□□□ -2.14
HOXA3O43365 MIR8065-201ENST00000620577 100 ntBASIC1.67□□□□□ -2.14
HOXA3O43365 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
HOXA3O43365 MIR302D-201ENST00000362275 68 ntBASIC1.66□□□□□ -2.14
HOXA3O43365 SNORD115-19-201ENST00000363098 82 ntBASIC1.66□□□□□ -2.14
HOXA3O43365 SNORD115-18-201ENST00000363293 82 ntBASIC1.66□□□□□ -2.14
HOXA3O43365 SNORD115-17-201ENST00000364612 82 ntBASIC1.66□□□□□ -2.14
HOXA3O43365 SNORA32-201ENST00000384072 121 ntBASIC1.66□□□□□ -2.14
HOXA3O43365 SNORD38B-201ENST00000384690 67 ntBASIC1.66□□□□□ -2.14
HOXA3O43365 SNORD77B-201ENST00000391112 67 ntBASIC1.66□□□□□ -2.14
HOXA3O43365 HMGN2P38-201ENST00000423806 265 ntBASIC1.66□□□□□ -2.14
HOXA3O43365 AC245047.7-201ENST00000440265 293 ntBASIC1.66□□□□□ -2.14
HOXA3O43365 RPL39P25-201ENST00000449384 154 ntBASIC1.66□□□□□ -2.14
HOXA3O43365 MIR1270-201ENST00000459320 83 ntBASIC1.66□□□□□ -2.14
HOXA3O43365 RNU6-168P-201ENST00000516189 101 ntBASIC1.66□□□□□ -2.14
HOXA3O43365 RNU6-295P-201ENST00000516901 104 ntBASIC1.66□□□□□ -2.14
HOXA3O43365 RNA5SP364-201ENST00000516938 78 ntBASIC1.66□□□□□ -2.14
HOXA3O43365 MIR3618-201ENST00000580330 88 ntBASIC1.66□□□□□ -2.14
HOXA3O43365 Y_RNA.783-201ENST00000613546 102 ntBASIC1.66□□□□□ -2.14
HOXA3O43365 SNORD38B-202ENST00000625943 69 ntBASIC1.66□□□□□ -2.14
HOXA3O43365 MIR1255B1-201ENST00000636325 63 ntBASIC1.66□□□□□ -2.14
HOXA3O43365 RNA5SP48-201ENST00000363969 126 ntBASIC1.65□□□□□ -2.15
HOXA3O43365 RNU6-756P-201ENST00000383997 107 ntBASIC1.65□□□□□ -2.15
HOXA3O43365 SNORA51.5-201ENST00000384126 131 ntBASIC1.65□□□□□ -2.15
HOXA3O43365 Y_RNA.495-201ENST00000384435 112 ntBASIC1.65□□□□□ -2.15
HOXA3O43365 MIR1912-201ENST00000410389 80 ntBASIC1.65□□□□□ -2.15
HOXA3O43365 HMGN2P19-201ENST00000425149 265 ntBASIC1.65□□□□□ -2.15
HOXA3O43365 AC079140.2-201ENST00000506193 142 ntBASIC1.65□□□□□ -2.15
HOXA3O43365 PRELID3BP2-201ENST00000605362 201 ntBASIC1.65□□□□□ -2.15
HOXA3O43365 AP000553.5-201ENST00000641933 54 ntBASIC1.65□□□□□ -2.15
HOXA3O43365 RNU6-1113P-201ENST00000384348 107 ntBASIC1.64□□□□□ -2.15
HOXA3O43365 RNU6-616P-201ENST00000384353 107 ntBASIC1.64□□□□□ -2.15
HOXA3O43365 RNU6-342P-201ENST00000384521 104 ntBASIC1.64□□□□□ -2.15
HOXA3O43365 MIR583-201ENST00000384846 75 ntBASIC1.64□□□□□ -2.15
HOXA3O43365 RNA5SP89-201ENST00000410300 108 ntBASIC1.64□□□□□ -2.15
HOXA3O43365 RNU6-766P-201ENST00000362478 107 ntBASIC1.63□□□□□ -2.15
HOXA3O43365 SNORD33-201ENST00000362761 85 ntBASIC1.63□□□□□ -2.15
HOXA3O43365 RNU6-363P-201ENST00000362895 105 ntBASIC1.63□□□□□ -2.15
HOXA3O43365 SNORA25.3-201ENST00000363205 127 ntBASIC1.63□□□□□ -2.15
HOXA3O43365 RNU6-32P-201ENST00000383948 107 ntBASIC1.63□□□□□ -2.15
HOXA3O43365 RNU6-13P-201ENST00000384248 107 ntBASIC1.63□□□□□ -2.15
HOXA3O43365 SNORA18-201ENST00000384416 132 ntBASIC1.63□□□□□ -2.15
HOXA3O43365 Y_RNA.507-201ENST00000384500 99 ntBASIC1.63□□□□□ -2.15
HOXA3O43365 RNU6-12P-201ENST00000384604 107 ntBASIC1.63□□□□□ -2.15
HOXA3O43365 RNU6-41P-201ENST00000384741 107 ntBASIC1.63□□□□□ -2.15
HOXA3O43365 MIR676-201ENST00000390702 67 ntBASIC1.63□□□□□ -2.15
HOXA3O43365 U8.13-201ENST00000390842 128 ntBASIC1.63□□□□□ -2.15
HOXA3O43365 RNU2-40P-201ENST00000410833 196 ntBASIC1.63□□□□□ -2.15
HOXA3O43365 RPL39P39-201ENST00000455840 151 ntBASIC1.63□□□□□ -2.15
HOXA3O43365 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.63□□□□□ -2.15
HOXA3O43365 snoU13.25-201ENST00000458945 104 ntBASIC1.63□□□□□ -2.15
HOXA3O43365 AL133373.1-201ENST00000497098 94 ntBASIC1.63□□□□□ -2.15
HOXA3O43365 RNA5SP445-201ENST00000515889 115 ntBASIC1.63□□□□□ -2.15
HOXA3O43365 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.63□□□□□ -2.15
HOXA3O43365 AC019176.1-201ENST00000518519 225 ntBASIC1.63□□□□□ -2.15
HOXA3O43365 AL096840.1-201ENST00000603287 93 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 182.3 ms