Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 AP001340.1-201ENST00000624405 217 ntBASIC1.93□□□□□ -2.1
PTCH2Q9Y6C5 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.93□□□□□ -2.1
PTCH2Q9Y6C5 SNORA16.1-201ENST00000364597 132 ntBASIC1.92□□□□□ -2.1
PTCH2Q9Y6C5 SNORA24-201ENST00000384096 131 ntBASIC1.92□□□□□ -2.1
PTCH2Q9Y6C5 RNU6-460P-201ENST00000391158 108 ntBASIC1.92□□□□□ -2.1
PTCH2Q9Y6C5 AL035398.1-201ENST00000430869 322 ntBASIC1.92□□□□□ -2.1
PTCH2Q9Y6C5 RNU7-67P-201ENST00000459003 62 ntBASIC1.92□□□□□ -2.1
PTCH2Q9Y6C5 SNORD53B-201ENST00000577887 78 ntBASIC1.92□□□□□ -2.1
PTCH2Q9Y6C5 MIR3935-201ENST00000583472 104 ntBASIC1.92□□□□□ -2.1
PTCH2Q9Y6C5 AP001485.1-201ENST00000604799 199 ntBASIC1.92□□□□□ -2.1
PTCH2Q9Y6C5 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
PTCH2Q9Y6C5 AC010332.2-201ENST00000613083 1904 ntBASIC1.91□□□□□ -2.1
PTCH2Q9Y6C5 SNORA7.1-201ENST00000363750 139 ntBASIC1.91□□□□□ -2.1
PTCH2Q9Y6C5 RNA5SP325-201ENST00000363756 130 ntBASIC1.91□□□□□ -2.1
PTCH2Q9Y6C5 RNU6-60P-201ENST00000364792 103 ntBASIC1.91□□□□□ -2.1
PTCH2Q9Y6C5 RNU1-133P-201ENST00000364867 167 ntBASIC1.91□□□□□ -2.1
PTCH2Q9Y6C5 RNU6-915P-201ENST00000364943 103 ntBASIC1.91□□□□□ -2.1
PTCH2Q9Y6C5 AC012493.3-201ENST00000604494 112 ntBASIC1.91□□□□□ -2.1
PTCH2Q9Y6C5 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.11
PTCH2Q9Y6C5 MIR302B-201ENST00000362188 73 ntBASIC1.9□□□□□ -2.11
PTCH2Q9Y6C5 U8.1-201ENST00000362843 134 ntBASIC1.9□□□□□ -2.11
PTCH2Q9Y6C5 RNU6-704P-201ENST00000364162 103 ntBASIC1.9□□□□□ -2.11
PTCH2Q9Y6C5 SNORD114-22-201ENST00000365423 72 ntBASIC1.9□□□□□ -2.11
PTCH2Q9Y6C5 SNORA40-201ENST00000388090 126 ntBASIC1.9□□□□□ -2.11
PTCH2Q9Y6C5 AL603914.1-201ENST00000401964 204 ntBASIC1.9□□□□□ -2.11
PTCH2Q9Y6C5 RNA5SP364-201ENST00000516938 78 ntBASIC1.9□□□□□ -2.11
PTCH2Q9Y6C5 RNU6-902P-201ENST00000517212 91 ntBASIC1.9□□□□□ -2.11
PTCH2Q9Y6C5 AL512310.8-201ENST00000550183 120 ntBASIC1.9□□□□□ -2.11
PTCH2Q9Y6C5 MIR3664-201ENST00000579074 99 ntBASIC1.9□□□□□ -2.11
PTCH2Q9Y6C5 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.9□□□□□ -2.11
PTCH2Q9Y6C5 AL121890.5-201ENST00000620848 304 ntBASIC1.9□□□□□ -2.11
PTCH2Q9Y6C5 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
PTCH2Q9Y6C5 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.9□□□□□ -2.11
PTCH2Q9Y6C5 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.89□□□□□ -2.11
PTCH2Q9Y6C5 RNY1P11-201ENST00000363759 113 ntBASIC1.89□□□□□ -2.11
PTCH2Q9Y6C5 Y_RNA.494-201ENST00000384432 111 ntBASIC1.89□□□□□ -2.11
PTCH2Q9Y6C5 SUMO2P12-201ENST00000405924 140 ntBASIC1.89□□□□□ -2.11
PTCH2Q9Y6C5 RPS27P16-201ENST00000425758 201 ntBASIC1.89□□□□□ -2.11
PTCH2Q9Y6C5 RNA5SP236-201ENST00000516169 116 ntBASIC1.89□□□□□ -2.11
PTCH2Q9Y6C5 Y_RNA.690-201ENST00000516603 95 ntBASIC1.89□□□□□ -2.11
PTCH2Q9Y6C5 U7.2-201ENST00000607576 63 ntBASIC1.89□□□□□ -2.11
PTCH2Q9Y6C5 MIR6779-201ENST00000617283 64 ntBASIC1.89□□□□□ -2.11
PTCH2Q9Y6C5 TUG1_4.1-201ENST00000619464 181 ntBASIC1.89□□□□□ -2.11
PTCH2Q9Y6C5 AC091932.4-201ENST00000623386 200 ntBASIC1.89□□□□□ -2.11
PTCH2Q9Y6C5 MIR4251-201ENST00000635819 61 ntBASIC1.89□□□□□ -2.11
PTCH2Q9Y6C5 MIR342-201ENST00000362212 99 ntBASIC1.88□□□□□ -2.11
PTCH2Q9Y6C5 MIR570-201ENST00000384917 97 ntBASIC1.88□□□□□ -2.11
PTCH2Q9Y6C5 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
PTCH2Q9Y6C5 TMSB4XP3-201ENST00000445144 114 ntBASIC1.88□□□□□ -2.11
PTCH2Q9Y6C5 RNU7-73P-201ENST00000458743 63 ntBASIC1.88□□□□□ -2.11
PTCH2Q9Y6C5 snoU13.16-201ENST00000459350 104 ntBASIC1.88□□□□□ -2.11
PTCH2Q9Y6C5 RNU6-947P-201ENST00000516264 106 ntBASIC1.88□□□□□ -2.11
PTCH2Q9Y6C5 Y_RNA.692-201ENST00000516627 105 ntBASIC1.88□□□□□ -2.11
PTCH2Q9Y6C5 AC024614.2-201ENST00000577584 372 ntBASIC1.88□□□□□ -2.11
PTCH2Q9Y6C5 Y_RNA.757-201ENST00000578934 114 ntBASIC1.88□□□□□ -2.11
PTCH2Q9Y6C5 AC011603.4-201ENST00000611325 277 ntBASIC1.88□□□□□ -2.11
PTCH2Q9Y6C5 AL157834.3-201ENST00000615543 103 ntBASIC1.88□□□□□ -2.11
PTCH2Q9Y6C5 AC091895.1-201ENST00000624494 256 ntBASIC1.88□□□□□ -2.11
PTCH2Q9Y6C5 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
PTCH2Q9Y6C5 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
PTCH2Q9Y6C5 AL596211.1-201ENST00000569873 2277 ntBASIC1.88□□□□□ -2.11
PTCH2Q9Y6C5 RNU2-11P-201ENST00000459191 187 ntBASIC1.87□□□□□ -2.11
PTCH2Q9Y6C5 RNU7-41P-201ENST00000515917 61 ntBASIC1.87□□□□□ -2.11
PTCH2Q9Y6C5 RNU6-113P-201ENST00000516653 101 ntBASIC1.87□□□□□ -2.11
PTCH2Q9Y6C5 RNU6-958P-201ENST00000516995 106 ntBASIC1.87□□□□□ -2.11
PTCH2Q9Y6C5 RNU2-60P-201ENST00000517290 128 ntBASIC1.87□□□□□ -2.11
PTCH2Q9Y6C5 MIR4421-201ENST00000578133 69 ntBASIC1.87□□□□□ -2.11
PTCH2Q9Y6C5 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
PTCH2Q9Y6C5 SNORA20-201ENST00000384662 132 ntBASIC1.86□□□□□ -2.11
PTCH2Q9Y6C5 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.86□□□□□ -2.11
PTCH2Q9Y6C5 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.86□□□□□ -2.11
PTCH2Q9Y6C5 Y_RNA.686-201ENST00000516548 134 ntBASIC1.86□□□□□ -2.11
PTCH2Q9Y6C5 MIR4419B-201ENST00000577260 68 ntBASIC1.86□□□□□ -2.11
PTCH2Q9Y6C5 MIR4285-201ENST00000581001 85 ntBASIC1.86□□□□□ -2.11
PTCH2Q9Y6C5 AL096861.1-201ENST00000610899 123 ntBASIC1.86□□□□□ -2.11
PTCH2Q9Y6C5 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
PTCH2Q9Y6C5 SNORD114-26-201ENST00000363543 72 ntBASIC1.85□□□□□ -2.11
PTCH2Q9Y6C5 RNU6-257P-201ENST00000410238 98 ntBASIC1.85□□□□□ -2.11
PTCH2Q9Y6C5 RNA5SP261-201ENST00000410536 106 ntBASIC1.85□□□□□ -2.11
PTCH2Q9Y6C5 RPL31P63-201ENST00000422565 375 ntBASIC1.85□□□□□ -2.11
PTCH2Q9Y6C5 RN7SKP88-201ENST00000516847 250 ntBASIC1.85□□□□□ -2.11
PTCH2Q9Y6C5 RNU1-92P-201ENST00000517017 135 ntBASIC1.85□□□□□ -2.11
PTCH2Q9Y6C5 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.85□□□□□ -2.11
PTCH2Q9Y6C5 7SK.8-201ENST00000612110 250 ntBASIC1.85□□□□□ -2.11
PTCH2Q9Y6C5 7SK.11-201ENST00000615477 250 ntBASIC1.85□□□□□ -2.11
PTCH2Q9Y6C5 7SK.13-201ENST00000622040 250 ntBASIC1.85□□□□□ -2.11
PTCH2Q9Y6C5 RNU6-53P-201ENST00000365367 106 ntBASIC1.84□□□□□ -2.11
PTCH2Q9Y6C5 MIR539-201ENST00000365690 78 ntBASIC1.84□□□□□ -2.11
PTCH2Q9Y6C5 RNY1P6-201ENST00000384193 109 ntBASIC1.84□□□□□ -2.11
PTCH2Q9Y6C5 SNORA67.6-201ENST00000391093 99 ntBASIC1.84□□□□□ -2.11
PTCH2Q9Y6C5 MTND4LP9-201ENST00000427694 174 ntBASIC1.84□□□□□ -2.11
PTCH2Q9Y6C5 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.84□□□□□ -2.11
PTCH2Q9Y6C5 RNA5SP272-201ENST00000516095 111 ntBASIC1.84□□□□□ -2.11
PTCH2Q9Y6C5 MIR3618-201ENST00000580330 88 ntBASIC1.84□□□□□ -2.11
PTCH2Q9Y6C5 AL022345.2-201ENST00000606307 135 ntBASIC1.84□□□□□ -2.11
PTCH2Q9Y6C5 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
PTCH2Q9Y6C5 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.83□□□□□ -2.12
PTCH2Q9Y6C5 RNU4-61P-201ENST00000411243 107 ntBASIC1.83□□□□□ -2.12
PTCH2Q9Y6C5 MIR3192-201ENST00000584920 77 ntBASIC1.83□□□□□ -2.12
PTCH2Q9Y6C5 ZNF209P-201ENST00000593450 2304 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 179.3 ms