Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RNU1-138P-201ENST00000384093 164 ntBASIC3.11□□□□□ -1.91
ZC3H4Q9UPT8 MIR520A-201ENST00000384862 85 ntBASIC3.11□□□□□ -1.91
ZC3H4Q9UPT8 SNORD78.1-201ENST00000390866 65 ntBASIC3.11□□□□□ -1.91
ZC3H4Q9UPT8 SNORD28B-201ENST00000390993 75 ntBASIC3.11□□□□□ -1.91
ZC3H4Q9UPT8 AL359511.1-201ENST00000402970 211 ntBASIC3.11□□□□□ -1.91
ZC3H4Q9UPT8 AC109327.2-201ENST00000448339 378 ntBASIC3.11□□□□□ -1.91
ZC3H4Q9UPT8 AC022137.1-201ENST00000483735 151 ntBASIC3.11□□□□□ -1.91
ZC3H4Q9UPT8 AC234781.5-201ENST00000508429 271 ntBASIC3.11□□□□□ -1.91
ZC3H4Q9UPT8 RNU6-521P-201ENST00000516663 105 ntBASIC3.11□□□□□ -1.91
ZC3H4Q9UPT8 MIR4709-201ENST00000577272 72 ntBASIC3.11□□□□□ -1.91
ZC3H4Q9UPT8 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.11□□□□□ -1.91
ZC3H4Q9UPT8 AC243994.1-201ENST00000618627 109 ntBASIC3.11□□□□□ -1.91
ZC3H4Q9UPT8 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
ZC3H4Q9UPT8 BTF3P4-201ENST00000418852 495 ntBASIC3.1□□□□□ -1.91
ZC3H4Q9UPT8 SNORD123-201ENST00000459473 70 ntBASIC3.1□□□□□ -1.91
ZC3H4Q9UPT8 MIR6717-201ENST00000622747 73 ntBASIC3.1□□□□□ -1.91
ZC3H4Q9UPT8 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.91
ZC3H4Q9UPT8 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
ZC3H4Q9UPT8 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.09□□□□□ -1.91
ZC3H4Q9UPT8 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
ZC3H4Q9UPT8 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
ZC3H4Q9UPT8 Y_RNA.96-201ENST00000363092 109 ntBASIC3.09□□□□□ -1.91
ZC3H4Q9UPT8 RNU6-1201P-201ENST00000384227 107 ntBASIC3.09□□□□□ -1.91
ZC3H4Q9UPT8 AC096949.1-201ENST00000412047 152 ntBASIC3.09□□□□□ -1.91
ZC3H4Q9UPT8 RNA5SP437-201ENST00000517249 129 ntBASIC3.09□□□□□ -1.91
ZC3H4Q9UPT8 MIR548AR-201ENST00000582191 57 ntBASIC3.09□□□□□ -1.91
ZC3H4Q9UPT8 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.09□□□□□ -1.91
ZC3H4Q9UPT8 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.09□□□□□ -1.91
ZC3H4Q9UPT8 MIR6841-201ENST00000637129 72 ntBASIC3.09□□□□□ -1.91
ZC3H4Q9UPT8 SNORD115-2-201ENST00000362842 82 ntBASIC3.08□□□□□ -1.92
ZC3H4Q9UPT8 SNORA3A-201ENST00000364113 130 ntBASIC3.08□□□□□ -1.92
ZC3H4Q9UPT8 SNORD114-30-201ENST00000364448 72 ntBASIC3.08□□□□□ -1.92
ZC3H4Q9UPT8 SNORD115-20-201ENST00000365099 82 ntBASIC3.08□□□□□ -1.92
ZC3H4Q9UPT8 Y_RNA.338-201ENST00000365320 114 ntBASIC3.08□□□□□ -1.92
ZC3H4Q9UPT8 RNU6-913P-201ENST00000390913 95 ntBASIC3.08□□□□□ -1.92
ZC3H4Q9UPT8 RPL23AP42-201ENST00000471152 471 ntBASIC3.08□□□□□ -1.92
ZC3H4Q9UPT8 MIR4446-201ENST00000578505 67 ntBASIC3.08□□□□□ -1.92
ZC3H4Q9UPT8 AC096720.1-201ENST00000604441 183 ntBASIC3.08□□□□□ -1.92
ZC3H4Q9UPT8 AC021506.2-201ENST00000612354 169 ntBASIC3.08□□□□□ -1.92
ZC3H4Q9UPT8 SNORD3E-202ENST00000627253 216 ntBASIC3.08□□□□□ -1.92
ZC3H4Q9UPT8 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ZC3H4Q9UPT8 Y_RNA.73-201ENST00000362910 113 ntBASIC3.07□□□□□ -1.92
ZC3H4Q9UPT8 Y_RNA.95-201ENST00000363079 95 ntBASIC3.07□□□□□ -1.92
ZC3H4Q9UPT8 RNU6-497P-201ENST00000365316 104 ntBASIC3.07□□□□□ -1.92
ZC3H4Q9UPT8 Y_RNA.467-201ENST00000384297 102 ntBASIC3.07□□□□□ -1.92
ZC3H4Q9UPT8 RNA5SP465-201ENST00000391195 109 ntBASIC3.07□□□□□ -1.92
ZC3H4Q9UPT8 SNORA26.6-201ENST00000391256 115 ntBASIC3.07□□□□□ -1.92
ZC3H4Q9UPT8 MIR1283-2-201ENST00000408621 87 ntBASIC3.07□□□□□ -1.92
ZC3H4Q9UPT8 MIR1270-201ENST00000459320 83 ntBASIC3.07□□□□□ -1.92
ZC3H4Q9UPT8 SCARNA16.3-201ENST00000516595 184 ntBASIC3.07□□□□□ -1.92
ZC3H4Q9UPT8 Y_RNA.705-201ENST00000516862 110 ntBASIC3.07□□□□□ -1.92
ZC3H4Q9UPT8 MIR4777-201ENST00000583710 86 ntBASIC3.07□□□□□ -1.92
ZC3H4Q9UPT8 MIR4635-201ENST00000583759 79 ntBASIC3.07□□□□□ -1.92
ZC3H4Q9UPT8 AL020996.3-201ENST00000606617 222 ntBASIC3.07□□□□□ -1.92
ZC3H4Q9UPT8 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ZC3H4Q9UPT8 SNORA1.1-201ENST00000364671 133 ntBASIC3.06□□□□□ -1.92
ZC3H4Q9UPT8 MIR526A1-201ENST00000384897 85 ntBASIC3.06□□□□□ -1.92
ZC3H4Q9UPT8 MIR518A2-201ENST00000384966 87 ntBASIC3.06□□□□□ -1.92
ZC3H4Q9UPT8 HMGN1P33-201ENST00000432945 451 ntBASIC3.06□□□□□ -1.92
ZC3H4Q9UPT8 SNORA9.3-201ENST00000516383 129 ntBASIC3.06□□□□□ -1.92
ZC3H4Q9UPT8 Y_RNA.685-201ENST00000516532 108 ntBASIC3.06□□□□□ -1.92
ZC3H4Q9UPT8 AC016717.2-201ENST00000609089 5141 ntBASIC3.06□□□□□ -1.92
ZC3H4Q9UPT8 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ZC3H4Q9UPT8 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ZC3H4Q9UPT8 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
ZC3H4Q9UPT8 AL442644.1-201ENST00000454390 3105 ntBASIC3.05□□□□□ -1.92
ZC3H4Q9UPT8 Y_RNA.377-201ENST00000365644 108 ntBASIC3.05□□□□□ -1.92
ZC3H4Q9UPT8 RNU6-1124P-201ENST00000384169 107 ntBASIC3.05□□□□□ -1.92
ZC3H4Q9UPT8 RNU6-242P-201ENST00000384359 107 ntBASIC3.05□□□□□ -1.92
ZC3H4Q9UPT8 RNU6-1067P-201ENST00000384752 107 ntBASIC3.05□□□□□ -1.92
ZC3H4Q9UPT8 MIR660-201ENST00000385235 97 ntBASIC3.05□□□□□ -1.92
ZC3H4Q9UPT8 RNU7-73P-201ENST00000458743 63 ntBASIC3.05□□□□□ -1.92
ZC3H4Q9UPT8 snoU13.27-201ENST00000459278 104 ntBASIC3.05□□□□□ -1.92
ZC3H4Q9UPT8 RNU6-1018P-201ENST00000516577 106 ntBASIC3.05□□□□□ -1.92
ZC3H4Q9UPT8 FAM106DP-201ENST00000586416 501 ntBASIC3.05□□□□□ -1.92
ZC3H4Q9UPT8 AL049779.4-201ENST00000604500 156 ntBASIC3.05□□□□□ -1.92
ZC3H4Q9UPT8 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.05□□□□□ -1.92
ZC3H4Q9UPT8 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
ZC3H4Q9UPT8 SNORA24-201ENST00000384096 131 ntBASIC3.04□□□□□ -1.92
ZC3H4Q9UPT8 SNORD23.1-201ENST00000408212 104 ntBASIC3.04□□□□□ -1.92
ZC3H4Q9UPT8 RPL39P39-201ENST00000455840 151 ntBASIC3.04□□□□□ -1.92
ZC3H4Q9UPT8 RNU7-193P-201ENST00000516723 65 ntBASIC3.04□□□□□ -1.92
ZC3H4Q9UPT8 AP000942.3-201ENST00000603702 160 ntBASIC3.04□□□□□ -1.92
ZC3H4Q9UPT8 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.04□□□□□ -1.92
ZC3H4Q9UPT8 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.04□□□□□ -1.92
ZC3H4Q9UPT8 AL513423.1-201ENST00000621695 132 ntBASIC3.04□□□□□ -1.92
ZC3H4Q9UPT8 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
ZC3H4Q9UPT8 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
ZC3H4Q9UPT8 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
ZC3H4Q9UPT8 WWP1P1-201ENST00000466609 2769 ntBASIC3.03□□□□□ -1.92
ZC3H4Q9UPT8 Y_RNA.190-201ENST00000363964 101 ntBASIC3.03□□□□□ -1.92
ZC3H4Q9UPT8 SNORA6-201ENST00000384033 151 ntBASIC3.03□□□□□ -1.92
ZC3H4Q9UPT8 RNU6-887P-201ENST00000410660 100 ntBASIC3.03□□□□□ -1.92
ZC3H4Q9UPT8 RNA5SP225-201ENST00000410874 135 ntBASIC3.03□□□□□ -1.92
ZC3H4Q9UPT8 AC108729.3-201ENST00000513484 108 ntBASIC3.03□□□□□ -1.92
ZC3H4Q9UPT8 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
ZC3H4Q9UPT8 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.03□□□□□ -1.92
ZC3H4Q9UPT8 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
ZC3H4Q9UPT8 Y_RNA.164-201ENST00000363709 102 ntBASIC3.02□□□□□ -1.93
ZC3H4Q9UPT8 SNORA48.1-201ENST00000390879 135 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms