Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
EFCC1Q9HA90 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
EFCC1Q9HA90 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
EFCC1Q9HA90 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
EFCC1Q9HA90 RNU1-58P-201ENST00000362413 163 ntBASIC2.85□□□□□ -1.95
EFCC1Q9HA90 SNORD115-19-201ENST00000363098 82 ntBASIC2.85□□□□□ -1.95
EFCC1Q9HA90 SNORD115-18-201ENST00000363293 82 ntBASIC2.85□□□□□ -1.95
EFCC1Q9HA90 Y_RNA.219-201ENST00000364232 113 ntBASIC2.85□□□□□ -1.95
EFCC1Q9HA90 SNORD115-17-201ENST00000364612 82 ntBASIC2.85□□□□□ -1.95
EFCC1Q9HA90 RNU6-1124P-201ENST00000384169 107 ntBASIC2.85□□□□□ -1.95
EFCC1Q9HA90 RNU6-679P-201ENST00000391003 106 ntBASIC2.85□□□□□ -1.95
EFCC1Q9HA90 AC004941.2-201ENST00000427009 228 ntBASIC2.85□□□□□ -1.95
EFCC1Q9HA90 MIR3126-201ENST00000577443 74 ntBASIC2.85□□□□□ -1.95
EFCC1Q9HA90 MIR548AE2-201ENST00000583456 67 ntBASIC2.85□□□□□ -1.95
EFCC1Q9HA90 AC005786.1-201ENST00000588553 154 ntBASIC2.85□□□□□ -1.95
EFCC1Q9HA90 MIR4791-201ENST00000607666 84 ntBASIC2.85□□□□□ -1.95
EFCC1Q9HA90 AL512310.12-203ENST00000640543 90 ntBASIC2.85□□□□□ -1.95
EFCC1Q9HA90 Y_RNA.190-201ENST00000363964 101 ntBASIC2.84□□□□□ -1.95
EFCC1Q9HA90 SNORD77B-201ENST00000391112 67 ntBASIC2.84□□□□□ -1.95
EFCC1Q9HA90 RNU6-972P-201ENST00000391208 107 ntBASIC2.84□□□□□ -1.95
EFCC1Q9HA90 BTF3P4-201ENST00000418852 495 ntBASIC2.84□□□□□ -1.95
EFCC1Q9HA90 RNU7-34P-201ENST00000459394 64 ntBASIC2.84□□□□□ -1.95
EFCC1Q9HA90 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.84□□□□□ -1.95
EFCC1Q9HA90 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
EFCC1Q9HA90 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
EFCC1Q9HA90 SNORA22.1-201ENST00000362701 134 ntBASIC2.83□□□□□ -1.96
EFCC1Q9HA90 Y_RNA.299-201ENST00000364973 94 ntBASIC2.83□□□□□ -1.96
EFCC1Q9HA90 RNU2-7P-201ENST00000410794 178 ntBASIC2.83□□□□□ -1.96
EFCC1Q9HA90 RNU6-1190P-201ENST00000410811 104 ntBASIC2.83□□□□□ -1.96
EFCC1Q9HA90 RPL39P39-201ENST00000455840 151 ntBASIC2.83□□□□□ -1.96
EFCC1Q9HA90 RPL23AP42-201ENST00000471152 471 ntBASIC2.83□□□□□ -1.96
EFCC1Q9HA90 RNU6-521P-201ENST00000516663 105 ntBASIC2.83□□□□□ -1.96
EFCC1Q9HA90 MIR3152-201ENST00000579801 74 ntBASIC2.83□□□□□ -1.96
EFCC1Q9HA90 AC046143.2-201ENST00000609789 160 ntBASIC2.83□□□□□ -1.96
EFCC1Q9HA90 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.83□□□□□ -1.96
EFCC1Q9HA90 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
EFCC1Q9HA90 Y_RNA.467-201ENST00000384297 102 ntBASIC2.82□□□□□ -1.96
EFCC1Q9HA90 RNA5SP210-201ENST00000391034 120 ntBASIC2.82□□□□□ -1.96
EFCC1Q9HA90 AL353813.1-201ENST00000440700 253 ntBASIC2.82□□□□□ -1.96
EFCC1Q9HA90 AC069257.2-201ENST00000441819 155 ntBASIC2.82□□□□□ -1.96
EFCC1Q9HA90 Y_RNA.685-201ENST00000516532 108 ntBASIC2.82□□□□□ -1.96
EFCC1Q9HA90 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.82□□□□□ -1.96
EFCC1Q9HA90 MIR6873-201ENST00000622788 63 ntBASIC2.82□□□□□ -1.96
EFCC1Q9HA90 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
EFCC1Q9HA90 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
EFCC1Q9HA90 RNU6-228P-201ENST00000362700 106 ntBASIC2.81□□□□□ -1.96
EFCC1Q9HA90 RNU6-833P-201ENST00000363486 107 ntBASIC2.81□□□□□ -1.96
EFCC1Q9HA90 Y_RNA.226-201ENST00000364337 114 ntBASIC2.81□□□□□ -1.96
EFCC1Q9HA90 RNU6-60P-201ENST00000364792 103 ntBASIC2.81□□□□□ -1.96
EFCC1Q9HA90 SNORA1.2-201ENST00000365189 134 ntBASIC2.81□□□□□ -1.96
EFCC1Q9HA90 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
EFCC1Q9HA90 RNU6-1319P-201ENST00000390855 104 ntBASIC2.81□□□□□ -1.96
EFCC1Q9HA90 RNU6-747P-201ENST00000390928 104 ntBASIC2.81□□□□□ -1.96
EFCC1Q9HA90 RNU6-241P-201ENST00000391148 104 ntBASIC2.81□□□□□ -1.96
EFCC1Q9HA90 RNU6-177P-201ENST00000411257 104 ntBASIC2.81□□□□□ -1.96
EFCC1Q9HA90 MRPL35P3-201ENST00000421557 364 ntBASIC2.81□□□□□ -1.96
EFCC1Q9HA90 MIR4777-201ENST00000583710 86 ntBASIC2.81□□□□□ -1.96
EFCC1Q9HA90 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.81□□□□□ -1.96
EFCC1Q9HA90 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
EFCC1Q9HA90 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
EFCC1Q9HA90 SNORD45B-201ENST00000364617 72 ntBASIC2.8□□□□□ -1.96
EFCC1Q9HA90 MIR1255A-201ENST00000408338 113 ntBASIC2.8□□□□□ -1.96
EFCC1Q9HA90 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.8□□□□□ -1.96
EFCC1Q9HA90 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
EFCC1Q9HA90 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.79□□□□□ -1.96
EFCC1Q9HA90 Y_RNA.140-201ENST00000363474 103 ntBASIC2.79□□□□□ -1.96
EFCC1Q9HA90 SNORA70.7-201ENST00000384159 133 ntBASIC2.79□□□□□ -1.96
EFCC1Q9HA90 RNU6-242P-201ENST00000384359 107 ntBASIC2.79□□□□□ -1.96
EFCC1Q9HA90 MIR136-201ENST00000385207 82 ntBASIC2.79□□□□□ -1.96
EFCC1Q9HA90 SNORD28B-201ENST00000390993 75 ntBASIC2.79□□□□□ -1.96
EFCC1Q9HA90 RNU6-402P-201ENST00000410678 103 ntBASIC2.79□□□□□ -1.96
EFCC1Q9HA90 AC079804.2-201ENST00000490376 200 ntBASIC2.79□□□□□ -1.96
EFCC1Q9HA90 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.79□□□□□ -1.96
EFCC1Q9HA90 MIR29C-201ENST00000385231 88 ntBASIC2.78□□□□□ -1.96
EFCC1Q9HA90 MIR1270-201ENST00000459320 83 ntBASIC2.78□□□□□ -1.96
EFCC1Q9HA90 RNU7-53P-201ENST00000516705 60 ntBASIC2.78□□□□□ -1.96
EFCC1Q9HA90 RNU6-267P-201ENST00000516714 103 ntBASIC2.78□□□□□ -1.96
EFCC1Q9HA90 AC005336.3-201ENST00000623833 2679 ntBASIC2.77□□□□□ -1.97
EFCC1Q9HA90 Y_RNA.95-201ENST00000363079 95 ntBASIC2.77□□□□□ -1.97
EFCC1Q9HA90 RNA5SP456-201ENST00000364002 114 ntBASIC2.77□□□□□ -1.97
EFCC1Q9HA90 RNU6-1031P-201ENST00000384773 107 ntBASIC2.77□□□□□ -1.97
EFCC1Q9HA90 MIR452-201ENST00000385020 85 ntBASIC2.77□□□□□ -1.97
EFCC1Q9HA90 RNU6-913P-201ENST00000390913 95 ntBASIC2.77□□□□□ -1.97
EFCC1Q9HA90 HMGN1P33-201ENST00000432945 451 ntBASIC2.77□□□□□ -1.97
EFCC1Q9HA90 RPS29P29-201ENST00000456396 171 ntBASIC2.77□□□□□ -1.97
EFCC1Q9HA90 RNVU1-2-201ENST00000516326 135 ntBASIC2.77□□□□□ -1.97
EFCC1Q9HA90 MIR548AR-201ENST00000582191 57 ntBASIC2.77□□□□□ -1.97
EFCC1Q9HA90 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.77□□□□□ -1.97
EFCC1Q9HA90 RNU6-1276P-201ENST00000365372 104 ntBASIC2.76□□□□□ -1.97
EFCC1Q9HA90 RNU6-1201P-201ENST00000384227 107 ntBASIC2.76□□□□□ -1.97
EFCC1Q9HA90 RNU1-148P-201ENST00000384472 162 ntBASIC2.76□□□□□ -1.97
EFCC1Q9HA90 MIR524-201ENST00000385242 87 ntBASIC2.76□□□□□ -1.97
EFCC1Q9HA90 AC026436.1-201ENST00000510537 270 ntBASIC2.76□□□□□ -1.97
EFCC1Q9HA90 MIR4658-201ENST00000584344 65 ntBASIC2.76□□□□□ -1.97
EFCC1Q9HA90 AP000942.3-201ENST00000603702 160 ntBASIC2.76□□□□□ -1.97
EFCC1Q9HA90 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.76□□□□□ -1.97
EFCC1Q9HA90 MIR6840-201ENST00000611937 71 ntBASIC2.76□□□□□ -1.97
EFCC1Q9HA90 AC243994.1-201ENST00000618627 109 ntBASIC2.76□□□□□ -1.97
EFCC1Q9HA90 MIR6717-201ENST00000622747 73 ntBASIC2.76□□□□□ -1.97
EFCC1Q9HA90 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms