Protein–RNA interactions for Protein: Q9H3S1

SEMA4A, Semaphorin-4A, humanhuman

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4AQ9H3S1 STAG3L5P-204ENST00000443759 179 ntBASIC2.24□□□□□ -2.05
SEMA4AQ9H3S1 PGBD4P5-201ENST00000445958 426 ntBASIC2.24□□□□□ -2.05
SEMA4AQ9H3S1 RNU6-717P-201ENST00000459076 104 ntBASIC2.24□□□□□ -2.05
SEMA4AQ9H3S1 AC114811.1-201ENST00000507207 168 ntBASIC2.24□□□□□ -2.05
SEMA4AQ9H3S1 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.24□□□□□ -2.05
SEMA4AQ9H3S1 SNORD115-40-201ENST00000606510 82 ntBASIC2.24□□□□□ -2.05
SEMA4AQ9H3S1 MIR8070-201ENST00000616510 88 ntBASIC2.24□□□□□ -2.05
SEMA4AQ9H3S1 MALAT1.1-201ENST00000618249 95 ntBASIC2.24□□□□□ -2.05
SEMA4AQ9H3S1 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SEMA4AQ9H3S1 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SEMA4AQ9H3S1 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
SEMA4AQ9H3S1 Y_RNA.220-201ENST00000364244 109 ntBASIC2.23□□□□□ -2.05
SEMA4AQ9H3S1 RNA5SP37-201ENST00000365420 130 ntBASIC2.23□□□□□ -2.05
SEMA4AQ9H3S1 MIR221-201ENST00000385135 110 ntBASIC2.23□□□□□ -2.05
SEMA4AQ9H3S1 RNU6-816P-201ENST00000390914 107 ntBASIC2.23□□□□□ -2.05
SEMA4AQ9H3S1 RNU6-1268P-201ENST00000391214 107 ntBASIC2.23□□□□□ -2.05
SEMA4AQ9H3S1 RNU6-1239P-201ENST00000391310 107 ntBASIC2.23□□□□□ -2.05
SEMA4AQ9H3S1 AC055731.1-201ENST00000474387 401 ntBASIC2.23□□□□□ -2.05
SEMA4AQ9H3S1 RNU6-904P-201ENST00000516206 101 ntBASIC2.23□□□□□ -2.05
SEMA4AQ9H3S1 RNA5SP200-201ENST00000516360 103 ntBASIC2.23□□□□□ -2.05
SEMA4AQ9H3S1 SNORA31.10-201ENST00000516482 106 ntBASIC2.23□□□□□ -2.05
SEMA4AQ9H3S1 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.23□□□□□ -2.05
SEMA4AQ9H3S1 MIR6845-201ENST00000613182 61 ntBASIC2.23□□□□□ -2.05
SEMA4AQ9H3S1 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SEMA4AQ9H3S1 RNA5SP160-201ENST00000364866 120 ntBASIC2.22□□□□□ -2.05
SEMA4AQ9H3S1 RNU6-1134P-201ENST00000365156 101 ntBASIC2.22□□□□□ -2.05
SEMA4AQ9H3S1 Y_RNA.342-201ENST00000365352 113 ntBASIC2.22□□□□□ -2.05
SEMA4AQ9H3S1 RNU4-52P-201ENST00000384209 138 ntBASIC2.22□□□□□ -2.05
SEMA4AQ9H3S1 RNU6-1031P-201ENST00000384773 107 ntBASIC2.22□□□□□ -2.05
SEMA4AQ9H3S1 AL356379.1-201ENST00000414105 126 ntBASIC2.22□□□□□ -2.05
SEMA4AQ9H3S1 AL512326.2-201ENST00000426359 151 ntBASIC2.22□□□□□ -2.05
SEMA4AQ9H3S1 RPL23AP63-201ENST00000498752 471 ntBASIC2.22□□□□□ -2.05
SEMA4AQ9H3S1 RNU6-162P-201ENST00000516228 103 ntBASIC2.22□□□□□ -2.05
SEMA4AQ9H3S1 MIR548Z-201ENST00000584743 97 ntBASIC2.22□□□□□ -2.05
SEMA4AQ9H3S1 Y_RNA.773-201ENST00000607168 90 ntBASIC2.22□□□□□ -2.05
SEMA4AQ9H3S1 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.22□□□□□ -2.05
SEMA4AQ9H3S1 MIR1255B1-201ENST00000636325 63 ntBASIC2.22□□□□□ -2.05
SEMA4AQ9H3S1 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
SEMA4AQ9H3S1 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
SEMA4AQ9H3S1 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
SEMA4AQ9H3S1 Y_RNA.107-201ENST00000363190 121 ntBASIC2.21□□□□□ -2.06
SEMA4AQ9H3S1 Y_RNA.531-201ENST00000384589 121 ntBASIC2.21□□□□□ -2.06
SEMA4AQ9H3S1 RNA5SP212-201ENST00000391223 107 ntBASIC2.21□□□□□ -2.06
SEMA4AQ9H3S1 RNA5SP100-201ENST00000410903 110 ntBASIC2.21□□□□□ -2.06
SEMA4AQ9H3S1 RNA5SP59-201ENST00000410922 110 ntBASIC2.21□□□□□ -2.06
SEMA4AQ9H3S1 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.21□□□□□ -2.06
SEMA4AQ9H3S1 snoU13.27-201ENST00000459278 104 ntBASIC2.21□□□□□ -2.06
SEMA4AQ9H3S1 AC107297.1-201ENST00000459991 176 ntBASIC2.21□□□□□ -2.06
SEMA4AQ9H3S1 AC113410.1-201ENST00000505029 247 ntBASIC2.21□□□□□ -2.06
SEMA4AQ9H3S1 RNU6-795P-201ENST00000516323 103 ntBASIC2.21□□□□□ -2.06
SEMA4AQ9H3S1 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.21□□□□□ -2.06
SEMA4AQ9H3S1 RNU7-181P-201ENST00000517234 74 ntBASIC2.21□□□□□ -2.06
SEMA4AQ9H3S1 MIR4709-201ENST00000577272 72 ntBASIC2.21□□□□□ -2.06
SEMA4AQ9H3S1 MIR4287-201ENST00000579398 78 ntBASIC2.21□□□□□ -2.06
SEMA4AQ9H3S1 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.21□□□□□ -2.06
SEMA4AQ9H3S1 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.21□□□□□ -2.06
SEMA4AQ9H3S1 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.21□□□□□ -2.06
SEMA4AQ9H3S1 AC095038.3-201ENST00000634439 195 ntBASIC2.21□□□□□ -2.06
SEMA4AQ9H3S1 AL162726.3-218ENST00000636401 95 ntBASIC2.21□□□□□ -2.06
SEMA4AQ9H3S1 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SEMA4AQ9H3S1 RNY3P2-201ENST00000362918 102 ntBASIC2.2□□□□□ -2.06
SEMA4AQ9H3S1 Y_RNA.241-201ENST00000364470 117 ntBASIC2.2□□□□□ -2.06
SEMA4AQ9H3S1 RNA5SP138-201ENST00000365098 114 ntBASIC2.2□□□□□ -2.06
SEMA4AQ9H3S1 RNU6-163P-201ENST00000384396 106 ntBASIC2.2□□□□□ -2.06
SEMA4AQ9H3S1 RNU6-360P-201ENST00000390944 104 ntBASIC2.2□□□□□ -2.06
SEMA4AQ9H3S1 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.2□□□□□ -2.06
SEMA4AQ9H3S1 AC025033.1-201ENST00000463883 194 ntBASIC2.2□□□□□ -2.06
SEMA4AQ9H3S1 RN7SKP12-201ENST00000516275 143 ntBASIC2.2□□□□□ -2.06
SEMA4AQ9H3S1 RNA5SP437-201ENST00000517249 129 ntBASIC2.2□□□□□ -2.06
SEMA4AQ9H3S1 MIR3163-201ENST00000581592 73 ntBASIC2.2□□□□□ -2.06
SEMA4AQ9H3S1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.2□□□□□ -2.06
SEMA4AQ9H3S1 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
SEMA4AQ9H3S1 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
SEMA4AQ9H3S1 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
SEMA4AQ9H3S1 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SEMA4AQ9H3S1 AL023284.1-201ENST00000403956 276 ntBASIC2.19□□□□□ -2.06
SEMA4AQ9H3S1 HSPE1P9-201ENST00000440046 311 ntBASIC2.19□□□□□ -2.06
SEMA4AQ9H3S1 SCARNA16.3-201ENST00000516595 184 ntBASIC2.19□□□□□ -2.06
SEMA4AQ9H3S1 RNU1-40P-201ENST00000516816 164 ntBASIC2.19□□□□□ -2.06
SEMA4AQ9H3S1 RNU1-97P-201ENST00000516872 164 ntBASIC2.19□□□□□ -2.06
SEMA4AQ9H3S1 DEFB131E-201ENST00000532329 154 ntBASIC2.19□□□□□ -2.06
SEMA4AQ9H3S1 AL359821.1-201ENST00000605519 182 ntBASIC2.19□□□□□ -2.06
SEMA4AQ9H3S1 AC087741.2-201ENST00000619415 172 ntBASIC2.19□□□□□ -2.06
SEMA4AQ9H3S1 AL513423.1-201ENST00000621695 132 ntBASIC2.19□□□□□ -2.06
SEMA4AQ9H3S1 MIRLET7C-201ENST00000362160 84 ntBASIC2.18□□□□□ -2.06
SEMA4AQ9H3S1 RNU6-833P-201ENST00000363486 107 ntBASIC2.18□□□□□ -2.06
SEMA4AQ9H3S1 RNU6-424P-201ENST00000384367 105 ntBASIC2.18□□□□□ -2.06
SEMA4AQ9H3S1 MIR605-201ENST00000385078 83 ntBASIC2.18□□□□□ -2.06
SEMA4AQ9H3S1 SNORA48.3-201ENST00000391081 134 ntBASIC2.18□□□□□ -2.06
SEMA4AQ9H3S1 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.18□□□□□ -2.06
SEMA4AQ9H3S1 TRMT112P2-201ENST00000512910 132 ntBASIC2.18□□□□□ -2.06
SEMA4AQ9H3S1 RNU7-61P-201ENST00000515897 61 ntBASIC2.18□□□□□ -2.06
SEMA4AQ9H3S1 AC026421.1-201ENST00000519101 163 ntBASIC2.18□□□□□ -2.06
SEMA4AQ9H3S1 Y_RNA.818-201ENST00000618813 71 ntBASIC2.18□□□□□ -2.06
SEMA4AQ9H3S1 Y_RNA.171-201ENST00000363760 102 ntBASIC2.17□□□□□ -2.06
SEMA4AQ9H3S1 SNORA27-201ENST00000384323 126 ntBASIC2.17□□□□□ -2.06
SEMA4AQ9H3S1 RNU2-40P-201ENST00000410833 196 ntBASIC2.17□□□□□ -2.06
SEMA4AQ9H3S1 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.17□□□□□ -2.06
SEMA4AQ9H3S1 RNU6-893P-201ENST00000458841 100 ntBASIC2.17□□□□□ -2.06
SEMA4AQ9H3S1 RNU6-1258P-201ENST00000516911 111 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms