Protein–RNA interactions for Protein: Q8NA58

PNLDC1, Poly(A)-specific ribonuclease PNLDC1, humanhuman

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNLDC1Q8NA58 DEFB122-202ENST00000569013 197 ntBASIC1.6□□□□□ -2.15
PNLDC1Q8NA58 AC021443.1-201ENST00000604478 211 ntBASIC1.6□□□□□ -2.15
PNLDC1Q8NA58 MIR4791-201ENST00000607666 84 ntBASIC1.6□□□□□ -2.15
PNLDC1Q8NA58 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.6□□□□□ -2.15
PNLDC1Q8NA58 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
PNLDC1Q8NA58 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.59□□□□□ -2.15
PNLDC1Q8NA58 Y_RNA.35-201ENST00000362601 101 ntBASIC1.59□□□□□ -2.15
PNLDC1Q8NA58 RNU6-1104P-201ENST00000384723 104 ntBASIC1.59□□□□□ -2.15
PNLDC1Q8NA58 MIR548A3-201ENST00000385297 97 ntBASIC1.59□□□□□ -2.15
PNLDC1Q8NA58 SNORD41-201ENST00000386967 70 ntBASIC1.59□□□□□ -2.15
PNLDC1Q8NA58 RNU6-1190P-201ENST00000410811 104 ntBASIC1.59□□□□□ -2.15
PNLDC1Q8NA58 RPL23AP6-201ENST00000446637 472 ntBASIC1.59□□□□□ -2.15
PNLDC1Q8NA58 Y_RNA.649-201ENST00000459077 103 ntBASIC1.59□□□□□ -2.15
PNLDC1Q8NA58 AC107297.1-201ENST00000459991 176 ntBASIC1.59□□□□□ -2.15
PNLDC1Q8NA58 COX6CP6-201ENST00000490840 228 ntBASIC1.59□□□□□ -2.15
PNLDC1Q8NA58 RNU7-123P-201ENST00000515911 60 ntBASIC1.59□□□□□ -2.15
PNLDC1Q8NA58 Y_RNA.709-201ENST00000516952 92 ntBASIC1.59□□□□□ -2.15
PNLDC1Q8NA58 RNU6-958P-201ENST00000516995 106 ntBASIC1.59□□□□□ -2.15
PNLDC1Q8NA58 MIR3683-201ENST00000580847 82 ntBASIC1.59□□□□□ -2.15
PNLDC1Q8NA58 MIR4305-201ENST00000583252 102 ntBASIC1.59□□□□□ -2.15
PNLDC1Q8NA58 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.59□□□□□ -2.15
PNLDC1Q8NA58 AC243994.1-201ENST00000618627 109 ntBASIC1.59□□□□□ -2.15
PNLDC1Q8NA58 MIR7843-201ENST00000622274 79 ntBASIC1.59□□□□□ -2.15
PNLDC1Q8NA58 AC021613.1-201ENST00000623880 111 ntBASIC1.59□□□□□ -2.15
PNLDC1Q8NA58 AL391516.1-201ENST00000554380 2449 ntBASIC1.59□□□□□ -2.16
PNLDC1Q8NA58 Y_RNA.537-201ENST00000384626 109 ntBASIC1.58□□□□□ -2.16
PNLDC1Q8NA58 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
PNLDC1Q8NA58 RNA5SP144-201ENST00000410846 116 ntBASIC1.58□□□□□ -2.16
PNLDC1Q8NA58 POLR2J4-204ENST00000418424 324 ntBASIC1.58□□□□□ -2.16
PNLDC1Q8NA58 AC063976.4-201ENST00000421971 163 ntBASIC1.58□□□□□ -2.16
PNLDC1Q8NA58 RNU7-73P-201ENST00000458743 63 ntBASIC1.58□□□□□ -2.16
PNLDC1Q8NA58 MIR4764-201ENST00000580680 88 ntBASIC1.58□□□□□ -2.16
PNLDC1Q8NA58 MIR6841-201ENST00000637129 72 ntBASIC1.58□□□□□ -2.16
PNLDC1Q8NA58 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
PNLDC1Q8NA58 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
PNLDC1Q8NA58 MIR302D-201ENST00000362275 68 ntBASIC1.57□□□□□ -2.16
PNLDC1Q8NA58 Y_RNA.198-201ENST00000364013 98 ntBASIC1.57□□□□□ -2.16
PNLDC1Q8NA58 RNA5SP259-201ENST00000365541 109 ntBASIC1.57□□□□□ -2.16
PNLDC1Q8NA58 SNORD116-21-201ENST00000384507 92 ntBASIC1.57□□□□□ -2.16
PNLDC1Q8NA58 MIR548A1-201ENST00000385041 97 ntBASIC1.57□□□□□ -2.16
PNLDC1Q8NA58 RNU6-1319P-201ENST00000390855 104 ntBASIC1.57□□□□□ -2.16
PNLDC1Q8NA58 RNU6-747P-201ENST00000390928 104 ntBASIC1.57□□□□□ -2.16
PNLDC1Q8NA58 RNU6-241P-201ENST00000391148 104 ntBASIC1.57□□□□□ -2.16
PNLDC1Q8NA58 RNU6-177P-201ENST00000411257 104 ntBASIC1.57□□□□□ -2.16
PNLDC1Q8NA58 RNU7-164P-201ENST00000459221 62 ntBASIC1.57□□□□□ -2.16
PNLDC1Q8NA58 RNU7-43P-201ENST00000516554 64 ntBASIC1.57□□□□□ -2.16
PNLDC1Q8NA58 RNU6-295P-201ENST00000516901 104 ntBASIC1.57□□□□□ -2.16
PNLDC1Q8NA58 RNU6-1258P-201ENST00000516911 111 ntBASIC1.57□□□□□ -2.16
PNLDC1Q8NA58 RNU6-250P-201ENST00000516958 103 ntBASIC1.57□□□□□ -2.16
PNLDC1Q8NA58 AC022523.2-201ENST00000561045 150 ntBASIC1.57□□□□□ -2.16
PNLDC1Q8NA58 MIR4419B-201ENST00000577260 68 ntBASIC1.57□□□□□ -2.16
PNLDC1Q8NA58 AL020996.3-201ENST00000606617 222 ntBASIC1.57□□□□□ -2.16
PNLDC1Q8NA58 MIR8074-201ENST00000615081 81 ntBASIC1.57□□□□□ -2.16
PNLDC1Q8NA58 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.57□□□□□ -2.16
PNLDC1Q8NA58 AL121890.5-201ENST00000620848 304 ntBASIC1.57□□□□□ -2.16
PNLDC1Q8NA58 SNORA70.7-201ENST00000384159 133 ntBASIC1.56□□□□□ -2.16
PNLDC1Q8NA58 MIR1289-2-201ENST00000408360 111 ntBASIC1.56□□□□□ -2.16
PNLDC1Q8NA58 RNU7-67P-201ENST00000459003 62 ntBASIC1.56□□□□□ -2.16
PNLDC1Q8NA58 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.56□□□□□ -2.16
PNLDC1Q8NA58 RNU7-53P-201ENST00000516705 60 ntBASIC1.56□□□□□ -2.16
PNLDC1Q8NA58 MIR8055-201ENST00000610739 97 ntBASIC1.56□□□□□ -2.16
PNLDC1Q8NA58 AC008133.2-201ENST00000624540 351 ntBASIC1.56□□□□□ -2.16
PNLDC1Q8NA58 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.56□□□□□ -2.16
PNLDC1Q8NA58 MIR302B-201ENST00000362188 73 ntBASIC1.55□□□□□ -2.16
PNLDC1Q8NA58 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
PNLDC1Q8NA58 U8.13-201ENST00000390842 128 ntBASIC1.55□□□□□ -2.16
PNLDC1Q8NA58 SNORA26.9-201ENST00000391322 122 ntBASIC1.55□□□□□ -2.16
PNLDC1Q8NA58 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.55□□□□□ -2.16
PNLDC1Q8NA58 AL512326.2-201ENST00000426359 151 ntBASIC1.55□□□□□ -2.16
PNLDC1Q8NA58 HMGN2P23-201ENST00000456759 269 ntBASIC1.55□□□□□ -2.16
PNLDC1Q8NA58 AC005908.1-201ENST00000468701 347 ntBASIC1.55□□□□□ -2.16
PNLDC1Q8NA58 RNU7-41P-201ENST00000515917 61 ntBASIC1.55□□□□□ -2.16
PNLDC1Q8NA58 RNU6-548P-201ENST00000517083 115 ntBASIC1.55□□□□□ -2.16
PNLDC1Q8NA58 MIR6717-201ENST00000622747 73 ntBASIC1.55□□□□□ -2.16
PNLDC1Q8NA58 RNU6-755P-201ENST00000364400 103 ntBASIC1.54□□□□□ -2.16
PNLDC1Q8NA58 SNORA51.10-201ENST00000384418 136 ntBASIC1.54□□□□□ -2.16
PNLDC1Q8NA58 RNU6-880P-201ENST00000384526 107 ntBASIC1.54□□□□□ -2.16
PNLDC1Q8NA58 Y_RNA.549-201ENST00000384657 102 ntBASIC1.54□□□□□ -2.16
PNLDC1Q8NA58 MIR520C-201ENST00000385005 87 ntBASIC1.54□□□□□ -2.16
PNLDC1Q8NA58 SNORA40.18-201ENST00000391200 128 ntBASIC1.54□□□□□ -2.16
PNLDC1Q8NA58 HMGN1P33-201ENST00000432945 451 ntBASIC1.54□□□□□ -2.16
PNLDC1Q8NA58 AL035470.1-201ENST00000622571 220 ntBASIC1.54□□□□□ -2.16
PNLDC1Q8NA58 SNORA63.4-201ENST00000362763 126 ntBASIC1.53□□□□□ -2.16
PNLDC1Q8NA58 Y_RNA.171-201ENST00000363760 102 ntBASIC1.53□□□□□ -2.16
PNLDC1Q8NA58 SNORD48-201ENST00000364953 64 ntBASIC1.53□□□□□ -2.16
PNLDC1Q8NA58 Y_RNA.430-201ENST00000384081 110 ntBASIC1.53□□□□□ -2.16
PNLDC1Q8NA58 snoU13.23-201ENST00000458863 104 ntBASIC1.53□□□□□ -2.16
PNLDC1Q8NA58 snoU13.25-201ENST00000458945 104 ntBASIC1.53□□□□□ -2.16
PNLDC1Q8NA58 snoU13.16-201ENST00000459350 104 ntBASIC1.53□□□□□ -2.16
PNLDC1Q8NA58 RNU6-922P-201ENST00000516753 99 ntBASIC1.53□□□□□ -2.16
PNLDC1Q8NA58 AC004812.1-201ENST00000540773 146 ntBASIC1.53□□□□□ -2.16
PNLDC1Q8NA58 DNAJC19P9-201ENST00000555084 351 ntBASIC1.53□□□□□ -2.16
PNLDC1Q8NA58 AC007012.1-201ENST00000567192 175 ntBASIC1.53□□□□□ -2.16
PNLDC1Q8NA58 MIR3192-201ENST00000584920 77 ntBASIC1.53□□□□□ -2.16
PNLDC1Q8NA58 AL513534.2-201ENST00000603836 250 ntBASIC1.53□□□□□ -2.16
PNLDC1Q8NA58 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.17
PNLDC1Q8NA58 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.52□□□□□ -2.17
PNLDC1Q8NA58 RNU6-153P-201ENST00000364422 104 ntBASIC1.52□□□□□ -2.17
PNLDC1Q8NA58 Y_RNA.281-201ENST00000364774 94 ntBASIC1.52□□□□□ -2.17
PNLDC1Q8NA58 AL451046.2-201ENST00000403074 277 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 233.9 ms