Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 HSPE1P19-201ENST00000603327 295 ntBASIC1.93□□□□□ -2.1
GABREP78334 AL137067.1-201ENST00000615933 120 ntBASIC1.93□□□□□ -2.1
GABREP78334 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
GABREP78334 Y_RNA.291-201ENST00000364886 113 ntBASIC1.92□□□□□ -2.1
GABREP78334 RNU6-1065P-201ENST00000384513 106 ntBASIC1.92□□□□□ -2.1
GABREP78334 Y_RNA.525-201ENST00000384570 113 ntBASIC1.92□□□□□ -2.1
GABREP78334 SNORA22C-201ENST00000384614 134 ntBASIC1.92□□□□□ -2.1
GABREP78334 MIR934-201ENST00000401241 83 ntBASIC1.92□□□□□ -2.1
GABREP78334 RNU7-45P-201ENST00000459460 63 ntBASIC1.92□□□□□ -2.1
GABREP78334 RNU7-41P-201ENST00000515917 61 ntBASIC1.92□□□□□ -2.1
GABREP78334 RNU6-772P-201ENST00000516042 105 ntBASIC1.92□□□□□ -2.1
GABREP78334 RNU6-659P-201ENST00000516454 104 ntBASIC1.92□□□□□ -2.1
GABREP78334 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
GABREP78334 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
GABREP78334 RNU1-40P-201ENST00000516816 164 ntBASIC1.91□□□□□ -2.1
GABREP78334 RNU1-97P-201ENST00000516872 164 ntBASIC1.91□□□□□ -2.1
GABREP78334 MIR4781-201ENST00000585250 76 ntBASIC1.91□□□□□ -2.1
GABREP78334 AC021443.1-201ENST00000604478 211 ntBASIC1.91□□□□□ -2.1
GABREP78334 MIR4251-201ENST00000635819 61 ntBASIC1.91□□□□□ -2.1
GABREP78334 RNA5SP37-201ENST00000365420 130 ntBASIC1.9□□□□□ -2.11
GABREP78334 Y_RNA.617-201ENST00000410920 90 ntBASIC1.9□□□□□ -2.11
GABREP78334 RNU7-73P-201ENST00000458743 63 ntBASIC1.9□□□□□ -2.11
GABREP78334 snoU13.16-201ENST00000459350 104 ntBASIC1.9□□□□□ -2.11
GABREP78334 SNORA31.4-201ENST00000516049 129 ntBASIC1.9□□□□□ -2.11
GABREP78334 RNU6-781P-201ENST00000516377 101 ntBASIC1.9□□□□□ -2.11
GABREP78334 RNU6-250P-201ENST00000516958 103 ntBASIC1.9□□□□□ -2.11
GABREP78334 AC021613.1-201ENST00000623880 111 ntBASIC1.9□□□□□ -2.11
GABREP78334 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.9□□□□□ -2.11
GABREP78334 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.89□□□□□ -2.11
GABREP78334 RNU6-913P-201ENST00000390913 95 ntBASIC1.89□□□□□ -2.11
GABREP78334 MIR1263-201ENST00000408324 86 ntBASIC1.89□□□□□ -2.11
GABREP78334 RPL39P39-201ENST00000455840 151 ntBASIC1.89□□□□□ -2.11
GABREP78334 IGKV1-22-201ENST00000524313 326 ntBASIC1.89□□□□□ -2.11
GABREP78334 AL359881.1-201ENST00000602916 267 ntBASIC1.89□□□□□ -2.11
GABREP78334 snoU13.31-201ENST00000607291 104 ntBASIC1.89□□□□□ -2.11
GABREP78334 MIR378A-201ENST00000362177 66 ntBASIC1.88□□□□□ -2.11
GABREP78334 SNORD58C-201ENST00000365223 64 ntBASIC1.88□□□□□ -2.11
GABREP78334 SNORA17.3-201ENST00000391159 129 ntBASIC1.88□□□□□ -2.11
GABREP78334 MIR1287-201ENST00000408492 90 ntBASIC1.88□□□□□ -2.11
GABREP78334 AC027119.1-201ENST00000440877 241 ntBASIC1.88□□□□□ -2.11
GABREP78334 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.88□□□□□ -2.11
GABREP78334 DNAJC19P9-201ENST00000555084 351 ntBASIC1.88□□□□□ -2.11
GABREP78334 MIR3152-201ENST00000579801 74 ntBASIC1.88□□□□□ -2.11
GABREP78334 MIR4285-201ENST00000581001 85 ntBASIC1.88□□□□□ -2.11
GABREP78334 SNRPGP19-201ENST00000603826 189 ntBASIC1.88□□□□□ -2.11
GABREP78334 AL096861.1-201ENST00000610899 123 ntBASIC1.88□□□□□ -2.11
GABREP78334 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
GABREP78334 RNA5SP48-201ENST00000363969 126 ntBASIC1.87□□□□□ -2.11
GABREP78334 RNA5SP205-201ENST00000364653 136 ntBASIC1.87□□□□□ -2.11
GABREP78334 RNA5SP261-201ENST00000410536 106 ntBASIC1.87□□□□□ -2.11
GABREP78334 RNU7-164P-201ENST00000459221 62 ntBASIC1.87□□□□□ -2.11
GABREP78334 Y_RNA.712-201ENST00000517011 92 ntBASIC1.87□□□□□ -2.11
GABREP78334 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.87□□□□□ -2.11
GABREP78334 MIR4305-201ENST00000583252 102 ntBASIC1.87□□□□□ -2.11
GABREP78334 MIR3192-201ENST00000584920 77 ntBASIC1.87□□□□□ -2.11
GABREP78334 AL020996.3-201ENST00000606617 222 ntBASIC1.87□□□□□ -2.11
GABREP78334 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
GABREP78334 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
GABREP78334 RNA5SP190-201ENST00000365222 118 ntBASIC1.86□□□□□ -2.11
GABREP78334 RNU6-1190P-201ENST00000410811 104 ntBASIC1.86□□□□□ -2.11
GABREP78334 AC025033.1-201ENST00000463883 194 ntBASIC1.86□□□□□ -2.11
GABREP78334 RPL30P7-201ENST00000479312 323 ntBASIC1.86□□□□□ -2.11
GABREP78334 MIR548AO-201ENST00000579992 96 ntBASIC1.86□□□□□ -2.11
GABREP78334 MIR4422-201ENST00000581938 83 ntBASIC1.86□□□□□ -2.11
GABREP78334 MIR3935-201ENST00000583472 104 ntBASIC1.86□□□□□ -2.11
GABREP78334 MIR5002-201ENST00000584713 97 ntBASIC1.86□□□□□ -2.11
GABREP78334 MIR7111-201ENST00000619751 72 ntBASIC1.86□□□□□ -2.11
GABREP78334 SNORA1.1-201ENST00000364671 133 ntBASIC1.85□□□□□ -2.11
GABREP78334 RNU6-1319P-201ENST00000390855 104 ntBASIC1.85□□□□□ -2.11
GABREP78334 RNU6-747P-201ENST00000390928 104 ntBASIC1.85□□□□□ -2.11
GABREP78334 RNU6-241P-201ENST00000391148 104 ntBASIC1.85□□□□□ -2.11
GABREP78334 RNU1-78P-201ENST00000391248 165 ntBASIC1.85□□□□□ -2.11
GABREP78334 RNU6-177P-201ENST00000411257 104 ntBASIC1.85□□□□□ -2.11
GABREP78334 Y_RNA.630-201ENST00000411370 108 ntBASIC1.85□□□□□ -2.11
GABREP78334 HMGN1P33-201ENST00000432945 451 ntBASIC1.85□□□□□ -2.11
GABREP78334 SNORD13-201ENST00000459299 104 ntBASIC1.85□□□□□ -2.11
GABREP78334 SNORA25.15-201ENST00000516487 89 ntBASIC1.85□□□□□ -2.11
GABREP78334 MIR3683-201ENST00000580847 82 ntBASIC1.85□□□□□ -2.11
GABREP78334 AC025166.1-201ENST00000612411 163 ntBASIC1.85□□□□□ -2.11
GABREP78334 MIR6717-201ENST00000622747 73 ntBASIC1.85□□□□□ -2.11
GABREP78334 MIR3914-2-201ENST00000637339 95 ntBASIC1.85□□□□□ -2.11
GABREP78334 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.84□□□□□ -2.11
GABREP78334 MIR337-201ENST00000362281 93 ntBASIC1.84□□□□□ -2.11
GABREP78334 AC003989.2-201ENST00000440224 169 ntBASIC1.84□□□□□ -2.11
GABREP78334 AC009474.2-201ENST00000451383 136 ntBASIC1.84□□□□□ -2.11
GABREP78334 RNY4P20-201ENST00000516678 93 ntBASIC1.84□□□□□ -2.11
GABREP78334 RNA5SP364-201ENST00000516938 78 ntBASIC1.84□□□□□ -2.11
GABREP78334 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.84□□□□□ -2.11
GABREP78334 MIR3664-201ENST00000579074 99 ntBASIC1.84□□□□□ -2.11
GABREP78334 Y_RNA.298-201ENST00000364960 107 ntBASIC1.83□□□□□ -2.12
GABREP78334 Y_RNA.528-201ENST00000384575 108 ntBASIC1.83□□□□□ -2.12
GABREP78334 RNA5SP144-201ENST00000410846 116 ntBASIC1.83□□□□□ -2.12
GABREP78334 RNA5SP136-201ENST00000410906 107 ntBASIC1.83□□□□□ -2.12
GABREP78334 AL022718.1-201ENST00000412004 84 ntBASIC1.83□□□□□ -2.12
GABREP78334 AL512310.8-201ENST00000550183 120 ntBASIC1.83□□□□□ -2.12
GABREP78334 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
GABREP78334 SNORA25.3-201ENST00000363205 127 ntBASIC1.82□□□□□ -2.12
GABREP78334 Y_RNA.346-201ENST00000365385 112 ntBASIC1.82□□□□□ -2.12
GABREP78334 SNORA26.6-201ENST00000391256 115 ntBASIC1.82□□□□□ -2.12
GABREP78334 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 233 ms