Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 AC012493.3-201ENST00000604494 112 ntBASIC1.84□□□□□ -2.11
SDHAP31040 GHRLOS.1-201ENST00000610995 70 ntBASIC1.84□□□□□ -2.11
SDHAP31040 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
SDHAP31040 MIR6715A-201ENST00000615929 79 ntBASIC1.84□□□□□ -2.11
SDHAP31040 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
SDHAP31040 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.84□□□□□ -2.12
SDHAP31040 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
SDHAP31040 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.83□□□□□ -2.12
SDHAP31040 MIR3937-201ENST00000580135 106 ntBASIC1.83□□□□□ -2.12
SDHAP31040 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.83□□□□□ -2.12
SDHAP31040 MIR6717-201ENST00000622747 73 ntBASIC1.83□□□□□ -2.12
SDHAP31040 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.83□□□□□ -2.12
SDHAP31040 SNORA22.1-201ENST00000362701 134 ntBASIC1.82□□□□□ -2.12
SDHAP31040 RNA5SP48-201ENST00000363969 126 ntBASIC1.82□□□□□ -2.12
SDHAP31040 RPS3AP1-201ENST00000413190 320 ntBASIC1.82□□□□□ -2.12
SDHAP31040 HMGN1P33-201ENST00000432945 451 ntBASIC1.82□□□□□ -2.12
SDHAP31040 RPL39P39-201ENST00000455840 151 ntBASIC1.82□□□□□ -2.12
SDHAP31040 RNU7-113P-201ENST00000459273 62 ntBASIC1.82□□□□□ -2.12
SDHAP31040 MIR3935-201ENST00000583472 104 ntBASIC1.82□□□□□ -2.12
SDHAP31040 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.82□□□□□ -2.12
SDHAP31040 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SDHAP31040 Y_RNA.81-201ENST00000362997 102 ntBASIC1.81□□□□□ -2.12
SDHAP31040 SNORD1A-201ENST00000364968 72 ntBASIC1.81□□□□□ -2.12
SDHAP31040 RNU6-44P-201ENST00000384045 107 ntBASIC1.81□□□□□ -2.12
SDHAP31040 SNORA67.3-201ENST00000384366 140 ntBASIC1.81□□□□□ -2.12
SDHAP31040 RNU6-880P-201ENST00000384526 107 ntBASIC1.81□□□□□ -2.12
SDHAP31040 RNA5SP489-201ENST00000410986 109 ntBASIC1.81□□□□□ -2.12
SDHAP31040 MTATP6P29-201ENST00000415057 132 ntBASIC1.81□□□□□ -2.12
SDHAP31040 POLR2J4-204ENST00000418424 324 ntBASIC1.81□□□□□ -2.12
SDHAP31040 AL512326.2-201ENST00000426359 151 ntBASIC1.81□□□□□ -2.12
SDHAP31040 AC004812.1-201ENST00000540773 146 ntBASIC1.81□□□□□ -2.12
SDHAP31040 AC022523.2-201ENST00000561045 150 ntBASIC1.81□□□□□ -2.12
SDHAP31040 CYP3A52P-201ENST00000563326 91 ntBASIC1.81□□□□□ -2.12
SDHAP31040 MIR3198-2-201ENST00000577868 80 ntBASIC1.81□□□□□ -2.12
SDHAP31040 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.81□□□□□ -2.12
SDHAP31040 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SDHAP31040 Y_RNA.35-201ENST00000362601 101 ntBASIC1.8□□□□□ -2.12
SDHAP31040 SNORD33-201ENST00000362761 85 ntBASIC1.8□□□□□ -2.12
SDHAP31040 RNU6-1065P-201ENST00000384513 106 ntBASIC1.8□□□□□ -2.12
SDHAP31040 SNORA26.6-201ENST00000391256 115 ntBASIC1.8□□□□□ -2.12
SDHAP31040 IGKV3-31-201ENST00000523109 329 ntBASIC1.8□□□□□ -2.12
SDHAP31040 AC007012.1-201ENST00000567192 175 ntBASIC1.8□□□□□ -2.12
SDHAP31040 MIR1273D-201ENST00000577266 86 ntBASIC1.8□□□□□ -2.12
SDHAP31040 MIR548AO-201ENST00000579992 96 ntBASIC1.8□□□□□ -2.12
SDHAP31040 AL096840.1-201ENST00000603287 93 ntBASIC1.8□□□□□ -2.12
SDHAP31040 AL161722.3-201ENST00000605789 2983 ntBASIC1.8□□□□□ -2.12
SDHAP31040 AL590808.1-201ENST00000618696 141 ntBASIC1.8□□□□□ -2.12
SDHAP31040 RNY4P6-201ENST00000363667 96 ntBASIC1.79□□□□□ -2.12
SDHAP31040 Y_RNA.171-201ENST00000363760 102 ntBASIC1.79□□□□□ -2.12
SDHAP31040 Y_RNA.531-201ENST00000384589 121 ntBASIC1.79□□□□□ -2.12
SDHAP31040 RNU6-1104P-201ENST00000384723 104 ntBASIC1.79□□□□□ -2.12
SDHAP31040 MIR1261-201ENST00000408659 82 ntBASIC1.79□□□□□ -2.12
SDHAP31040 RNA5SP425-201ENST00000410336 112 ntBASIC1.79□□□□□ -2.12
SDHAP31040 Z98742.3-201ENST00000418637 326 ntBASIC1.79□□□□□ -2.12
SDHAP31040 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SDHAP31040 Y_RNA.709-201ENST00000516952 92 ntBASIC1.79□□□□□ -2.12
SDHAP31040 RNU6-250P-201ENST00000516958 103 ntBASIC1.79□□□□□ -2.12
SDHAP31040 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.79□□□□□ -2.12
SDHAP31040 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.79□□□□□ -2.12
SDHAP31040 MIR3163-201ENST00000581592 73 ntBASIC1.79□□□□□ -2.12
SDHAP31040 AC064859.1-201ENST00000624741 174 ntBASIC1.79□□□□□ -2.12
SDHAP31040 MIR219B-201ENST00000637023 88 ntBASIC1.79□□□□□ -2.12
SDHAP31040 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.78□□□□□ -2.12
SDHAP31040 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.78□□□□□ -2.12
SDHAP31040 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
SDHAP31040 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
SDHAP31040 SNORA70B-201ENST00000384210 135 ntBASIC1.78□□□□□ -2.12
SDHAP31040 AC009474.2-201ENST00000451383 136 ntBASIC1.78□□□□□ -2.12
SDHAP31040 RN7SL274P-201ENST00000492268 272 ntBASIC1.78□□□□□ -2.12
SDHAP31040 RNA5SP33-201ENST00000516687 98 ntBASIC1.78□□□□□ -2.12
SDHAP31040 RNU7-6P-201ENST00000516845 62 ntBASIC1.78□□□□□ -2.12
SDHAP31040 MIR3192-201ENST00000584920 77 ntBASIC1.78□□□□□ -2.12
SDHAP31040 SNRPGP19-201ENST00000603826 189 ntBASIC1.78□□□□□ -2.12
SDHAP31040 MIR8055-201ENST00000610739 97 ntBASIC1.78□□□□□ -2.12
SDHAP31040 AL096861.1-201ENST00000610899 123 ntBASIC1.78□□□□□ -2.12
SDHAP31040 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SDHAP31040 MIR302D-201ENST00000362275 68 ntBASIC1.77□□□□□ -2.13
SDHAP31040 Y_RNA.354-201ENST00000365448 111 ntBASIC1.77□□□□□ -2.13
SDHAP31040 SNORA22-201ENST00000383907 134 ntBASIC1.77□□□□□ -2.13
SDHAP31040 Y_RNA.430-201ENST00000384081 110 ntBASIC1.77□□□□□ -2.13
SDHAP31040 SNORA64-201ENST00000384674 134 ntBASIC1.77□□□□□ -2.13
SDHAP31040 RNU6-589P-201ENST00000516485 107 ntBASIC1.77□□□□□ -2.13
SDHAP31040 Y_RNA.783-201ENST00000613546 102 ntBASIC1.77□□□□□ -2.13
SDHAP31040 MIR6841-201ENST00000637129 72 ntBASIC1.77□□□□□ -2.13
SDHAP31040 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.77□□□□□ -2.13
SDHAP31040 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.77□□□□□ -2.13
SDHAP31040 MT-TI-201ENST00000387365 69 ntBASIC1.76□□□□□ -2.13
SDHAP31040 RNY4P18-201ENST00000391107 89 ntBASIC1.76□□□□□ -2.13
SDHAP31040 SUMO2P12-201ENST00000405924 140 ntBASIC1.76□□□□□ -2.13
SDHAP31040 SNORA3.2-201ENST00000408221 125 ntBASIC1.76□□□□□ -2.13
SDHAP31040 RN7SKP223-201ENST00000410582 62 ntBASIC1.76□□□□□ -2.13
SDHAP31040 AC113410.1-201ENST00000505029 247 ntBASIC1.76□□□□□ -2.13
SDHAP31040 RNU6-412P-201ENST00000516434 106 ntBASIC1.76□□□□□ -2.13
SDHAP31040 RNU6-1258P-201ENST00000516911 111 ntBASIC1.76□□□□□ -2.13
SDHAP31040 MIR5089-201ENST00000580047 84 ntBASIC1.76□□□□□ -2.13
SDHAP31040 Z97988.1-201ENST00000637697 135 ntBASIC1.76□□□□□ -2.13
SDHAP31040 SNORA25.3-201ENST00000363205 127 ntBASIC1.75□□□□□ -2.13
SDHAP31040 Y_RNA.299-201ENST00000364973 94 ntBASIC1.75□□□□□ -2.13
SDHAP31040 SNORD38B-201ENST00000384690 67 ntBASIC1.75□□□□□ -2.13
SDHAP31040 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms