Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 Y_RNA.168-201ENST00000363740 102 ntBASIC3□□□□□ -1.93
VARSP26640 RNU1-91P-201ENST00000364746 163 ntBASIC3□□□□□ -1.93
VARSP26640 SNORD67-201ENST00000390833 111 ntBASIC3□□□□□ -1.93
VARSP26640 RNU6-602P-201ENST00000411155 105 ntBASIC3□□□□□ -1.93
VARSP26640 AC090255.1-201ENST00000495779 349 ntBASIC3□□□□□ -1.93
VARSP26640 RNU7-153P-201ENST00000516455 62 ntBASIC3□□□□□ -1.93
VARSP26640 AC021506.2-201ENST00000612354 169 ntBASIC3□□□□□ -1.93
VARSP26640 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3□□□□□ -1.93
VARSP26640 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
VARSP26640 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
VARSP26640 RNU6-1237P-201ENST00000384777 107 ntBASIC2.99□□□□□ -1.93
VARSP26640 MIR660-201ENST00000385235 97 ntBASIC2.99□□□□□ -1.93
VARSP26640 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.99□□□□□ -1.93
VARSP26640 AL513423.1-201ENST00000621695 132 ntBASIC2.99□□□□□ -1.93
VARSP26640 Z97988.1-201ENST00000637697 135 ntBASIC2.99□□□□□ -1.93
VARSP26640 MIR622-201ENST00000638396 96 ntBASIC2.99□□□□□ -1.93
VARSP26640 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.99□□□□□ -1.93
VARSP26640 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
VARSP26640 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
VARSP26640 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
VARSP26640 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
VARSP26640 SNORA7.4-201ENST00000384249 137 ntBASIC2.98□□□□□ -1.93
VARSP26640 SNORA2B-201ENST00000384583 137 ntBASIC2.98□□□□□ -1.93
VARSP26640 Y_RNA.545-201ENST00000384652 105 ntBASIC2.98□□□□□ -1.93
VARSP26640 SNORD15B-201ENST00000384714 146 ntBASIC2.98□□□□□ -1.93
VARSP26640 RN7SKP132-201ENST00000516001 208 ntBASIC2.98□□□□□ -1.93
VARSP26640 MIR3126-201ENST00000577443 74 ntBASIC2.98□□□□□ -1.93
VARSP26640 AP001362.1-201ENST00000625165 124 ntBASIC2.98□□□□□ -1.93
VARSP26640 RNU6-315P-201ENST00000362666 107 ntBASIC2.97□□□□□ -1.93
VARSP26640 MIR520A-201ENST00000384862 85 ntBASIC2.97□□□□□ -1.93
VARSP26640 RNU6-129P-201ENST00000391022 107 ntBASIC2.97□□□□□ -1.93
VARSP26640 RN7SL20P-201ENST00000488827 297 ntBASIC2.97□□□□□ -1.93
VARSP26640 RNVU1-2-201ENST00000516326 135 ntBASIC2.97□□□□□ -1.93
VARSP26640 SNORA74.3-201ENST00000517108 154 ntBASIC2.97□□□□□ -1.93
VARSP26640 RNA5SP437-201ENST00000517249 129 ntBASIC2.97□□□□□ -1.93
VARSP26640 MIR4709-201ENST00000577272 72 ntBASIC2.97□□□□□ -1.93
VARSP26640 AC006023.1-201ENST00000603944 259 ntBASIC2.97□□□□□ -1.93
VARSP26640 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.97□□□□□ -1.93
VARSP26640 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.96□□□□□ -1.94
VARSP26640 MIR1236-201ENST00000408340 102 ntBASIC2.96□□□□□ -1.94
VARSP26640 AP004217.1-201ENST00000480579 346 ntBASIC2.96□□□□□ -1.94
VARSP26640 SNORA25.13-201ENST00000516395 103 ntBASIC2.96□□□□□ -1.94
VARSP26640 CYP3A52P-201ENST00000563326 91 ntBASIC2.96□□□□□ -1.94
VARSP26640 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.96□□□□□ -1.94
VARSP26640 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
VARSP26640 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
VARSP26640 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
VARSP26640 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
VARSP26640 RNU4-32P-201ENST00000363404 141 ntBASIC2.95□□□□□ -1.94
VARSP26640 SNORA44-201ENST00000384584 132 ntBASIC2.95□□□□□ -1.94
VARSP26640 RNA5SP274-201ENST00000410484 108 ntBASIC2.95□□□□□ -1.94
VARSP26640 HMGN2P35-201ENST00000412164 270 ntBASIC2.95□□□□□ -1.94
VARSP26640 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.95□□□□□ -1.94
VARSP26640 AC087499.7-201ENST00000441958 109 ntBASIC2.95□□□□□ -1.94
VARSP26640 RN7SL429P-201ENST00000479090 223 ntBASIC2.95□□□□□ -1.94
VARSP26640 RN7SL489P-201ENST00000486185 223 ntBASIC2.95□□□□□ -1.94
VARSP26640 RN7SL327P-201ENST00000488659 223 ntBASIC2.95□□□□□ -1.94
VARSP26640 MIR4658-201ENST00000584344 65 ntBASIC2.95□□□□□ -1.94
VARSP26640 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.95□□□□□ -1.94
VARSP26640 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.95□□□□□ -1.94
VARSP26640 RN7SL853P-201ENST00000617250 223 ntBASIC2.95□□□□□ -1.94
VARSP26640 AL137790.1-201ENST00000634283 177 ntBASIC2.95□□□□□ -1.94
VARSP26640 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
VARSP26640 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
VARSP26640 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.95□□□□□ -1.94
VARSP26640 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
VARSP26640 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VARSP26640 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.94□□□□□ -1.94
VARSP26640 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
VARSP26640 Y_RNA.57-201ENST00000362806 113 ntBASIC2.94□□□□□ -1.94
VARSP26640 VTRNA1-1-201ENST00000363120 99 ntBASIC2.94□□□□□ -1.94
VARSP26640 SNORA71.1-201ENST00000364523 117 ntBASIC2.94□□□□□ -1.94
VARSP26640 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.94□□□□□ -1.94
VARSP26640 RN7SL633P-201ENST00000488974 297 ntBASIC2.94□□□□□ -1.94
VARSP26640 AC107016.2-201ENST00000547968 190 ntBASIC2.94□□□□□ -1.94
VARSP26640 SNORD14A-201ENST00000606526 91 ntBASIC2.94□□□□□ -1.94
VARSP26640 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.94□□□□□ -1.94
VARSP26640 AC008133.2-201ENST00000624540 351 ntBASIC2.94□□□□□ -1.94
VARSP26640 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
VARSP26640 AC073325.2-201ENST00000339545 159 ntBASIC2.93□□□□□ -1.94
VARSP26640 RNU6-478P-201ENST00000363904 110 ntBASIC2.93□□□□□ -1.94
VARSP26640 RNY1P13-201ENST00000365030 105 ntBASIC2.93□□□□□ -1.94
VARSP26640 RNU6-301P-201ENST00000384277 107 ntBASIC2.93□□□□□ -1.94
VARSP26640 SNORA54-201ENST00000384281 123 ntBASIC2.93□□□□□ -1.94
VARSP26640 HMGN2P3-201ENST00000433603 273 ntBASIC2.93□□□□□ -1.94
VARSP26640 HMGN2P5-201ENST00000436882 273 ntBASIC2.93□□□□□ -1.94
VARSP26640 AL450471.1-201ENST00000447509 127 ntBASIC2.93□□□□□ -1.94
VARSP26640 AC099513.1-201ENST00000490423 301 ntBASIC2.93□□□□□ -1.94
VARSP26640 AC007318.2-201ENST00000620999 243 ntBASIC2.93□□□□□ -1.94
VARSP26640 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
VARSP26640 AL161431.1-201ENST00000618966 4205 ntBASIC2.93□□□□□ -1.94
VARSP26640 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
VARSP26640 MIR22-201ENST00000362190 85 ntBASIC2.92□□□□□ -1.94
VARSP26640 RNU6-1094P-201ENST00000362416 104 ntBASIC2.92□□□□□ -1.94
VARSP26640 AL023284.1-201ENST00000403956 276 ntBASIC2.92□□□□□ -1.94
VARSP26640 AC022018.1-201ENST00000430685 241 ntBASIC2.92□□□□□ -1.94
VARSP26640 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.92□□□□□ -1.94
VARSP26640 snoU13.27-201ENST00000459278 104 ntBASIC2.92□□□□□ -1.94
VARSP26640 AC004223.1-201ENST00000479840 271 ntBASIC2.92□□□□□ -1.94
VARSP26640 AC008885.1-201ENST00000514930 301 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 202.4 ms