Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 MRPL35P3-201ENST00000421557 364 ntBASIC2.67□□□□□ -1.98
HOXD8P13378 RPS12P2-201ENST00000439728 269 ntBASIC2.67□□□□□ -1.98
HOXD8P13378 AC026436.1-201ENST00000510537 270 ntBASIC2.67□□□□□ -1.98
HOXD8P13378 RNU6-1258P-201ENST00000516911 111 ntBASIC2.67□□□□□ -1.98
HOXD8P13378 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.67□□□□□ -1.98
HOXD8P13378 AC022254.1-201ENST00000567857 235 ntBASIC2.67□□□□□ -1.98
HOXD8P13378 MIR5007-201ENST00000583098 95 ntBASIC2.67□□□□□ -1.98
HOXD8P13378 AC096720.1-201ENST00000604441 183 ntBASIC2.67□□□□□ -1.98
HOXD8P13378 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HOXD8P13378 RNU6-228P-201ENST00000362700 106 ntBASIC2.66□□□□□ -1.98
HOXD8P13378 Y_RNA.593-201ENST00000410292 98 ntBASIC2.66□□□□□ -1.98
HOXD8P13378 RNU6-1190P-201ENST00000410811 104 ntBASIC2.66□□□□□ -1.98
HOXD8P13378 HMGN2P35-201ENST00000412164 270 ntBASIC2.66□□□□□ -1.98
HOXD8P13378 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.66□□□□□ -1.98
HOXD8P13378 snoU13.27-201ENST00000459278 104 ntBASIC2.66□□□□□ -1.98
HOXD8P13378 SNORD123-201ENST00000459473 70 ntBASIC2.66□□□□□ -1.98
HOXD8P13378 RNA5SP437-201ENST00000517249 129 ntBASIC2.66□□□□□ -1.98
HOXD8P13378 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.66□□□□□ -1.98
HOXD8P13378 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
HOXD8P13378 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.65□□□□□ -1.99
HOXD8P13378 Y_RNA.4-201ENST00000362333 112 ntBASIC2.65□□□□□ -1.99
HOXD8P13378 VTRNA1-1-201ENST00000363120 99 ntBASIC2.65□□□□□ -1.99
HOXD8P13378 RNU6-679P-201ENST00000391003 106 ntBASIC2.65□□□□□ -1.99
HOXD8P13378 RPL39P39-201ENST00000455840 151 ntBASIC2.65□□□□□ -1.99
HOXD8P13378 RNU2-13P-201ENST00000515909 113 ntBASIC2.65□□□□□ -1.99
HOXD8P13378 RNU6-521P-201ENST00000516663 105 ntBASIC2.65□□□□□ -1.99
HOXD8P13378 RNA5SP481-201ENST00000516814 122 ntBASIC2.65□□□□□ -1.99
HOXD8P13378 AC021506.2-201ENST00000612354 169 ntBASIC2.65□□□□□ -1.99
HOXD8P13378 AL513423.1-201ENST00000621695 132 ntBASIC2.65□□□□□ -1.99
HOXD8P13378 MIR6717-201ENST00000622747 73 ntBASIC2.65□□□□□ -1.99
HOXD8P13378 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
HOXD8P13378 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
HOXD8P13378 SNORD115-2-201ENST00000362842 82 ntBASIC2.64□□□□□ -1.99
HOXD8P13378 SNORD115-20-201ENST00000365099 82 ntBASIC2.64□□□□□ -1.99
HOXD8P13378 MIR660-201ENST00000385235 97 ntBASIC2.64□□□□□ -1.99
HOXD8P13378 SNORA48.1-201ENST00000390879 135 ntBASIC2.64□□□□□ -1.99
HOXD8P13378 SNORD28B-201ENST00000390993 75 ntBASIC2.64□□□□□ -1.99
HOXD8P13378 AL451046.2-201ENST00000403074 277 ntBASIC2.64□□□□□ -1.99
HOXD8P13378 MIR1283-2-201ENST00000408621 87 ntBASIC2.64□□□□□ -1.99
HOXD8P13378 SUMO1P4-201ENST00000429430 302 ntBASIC2.64□□□□□ -1.99
HOXD8P13378 MIR548AR-201ENST00000582191 57 ntBASIC2.64□□□□□ -1.99
HOXD8P13378 RNU6-60P-201ENST00000364792 103 ntBASIC2.63□□□□□ -1.99
HOXD8P13378 RNU6-1276P-201ENST00000365372 104 ntBASIC2.63□□□□□ -1.99
HOXD8P13378 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
HOXD8P13378 RNU6-279P-201ENST00000391297 101 ntBASIC2.63□□□□□ -1.99
HOXD8P13378 RNA5SP270-201ENST00000411361 118 ntBASIC2.63□□□□□ -1.99
HOXD8P13378 AC022137.1-201ENST00000483735 151 ntBASIC2.63□□□□□ -1.99
HOXD8P13378 SCARNA16.3-201ENST00000516595 184 ntBASIC2.63□□□□□ -1.99
HOXD8P13378 MIR4658-201ENST00000584344 65 ntBASIC2.63□□□□□ -1.99
HOXD8P13378 MIR548Z-201ENST00000584743 97 ntBASIC2.63□□□□□ -1.99
HOXD8P13378 FAM106DP-201ENST00000586416 501 ntBASIC2.63□□□□□ -1.99
HOXD8P13378 AL020996.3-201ENST00000606617 222 ntBASIC2.63□□□□□ -1.99
HOXD8P13378 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.63□□□□□ -1.99
HOXD8P13378 MIR6841-201ENST00000637129 72 ntBASIC2.63□□□□□ -1.99
HOXD8P13378 AL161431.1-201ENST00000618966 4205 ntBASIC2.63□□□□□ -1.99
HOXD8P13378 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HOXD8P13378 SNORA1.1-201ENST00000364671 133 ntBASIC2.62□□□□□ -1.99
HOXD8P13378 RNU6-675P-201ENST00000384236 104 ntBASIC2.62□□□□□ -1.99
HOXD8P13378 RNU6-913P-201ENST00000390913 95 ntBASIC2.62□□□□□ -1.99
HOXD8P13378 RPL23AP6-201ENST00000446637 472 ntBASIC2.62□□□□□ -1.99
HOXD8P13378 RNU7-73P-201ENST00000458743 63 ntBASIC2.62□□□□□ -1.99
HOXD8P13378 Y_RNA.705-201ENST00000516862 110 ntBASIC2.62□□□□□ -1.99
HOXD8P13378 Z82195.2-201ENST00000612348 18351 ntBASIC2.62□□□□□ -1.99
HOXD8P13378 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HOXD8P13378 Y_RNA.95-201ENST00000363079 95 ntBASIC2.61□□□□□ -1.99
HOXD8P13378 Y_RNA.164-201ENST00000363709 102 ntBASIC2.61□□□□□ -1.99
HOXD8P13378 Y_RNA.226-201ENST00000364337 114 ntBASIC2.61□□□□□ -1.99
HOXD8P13378 SNORD114-30-201ENST00000364448 72 ntBASIC2.61□□□□□ -1.99
HOXD8P13378 RNU6-1201P-201ENST00000384227 107 ntBASIC2.61□□□□□ -1.99
HOXD8P13378 MIR526A1-201ENST00000384897 85 ntBASIC2.61□□□□□ -1.99
HOXD8P13378 MIR1255A-201ENST00000408338 113 ntBASIC2.61□□□□□ -1.99
HOXD8P13378 RNA5SP501-201ENST00000410990 112 ntBASIC2.61□□□□□ -1.99
HOXD8P13378 RNA5SP458-201ENST00000516188 119 ntBASIC2.61□□□□□ -1.99
HOXD8P13378 AC019288.1-201ENST00000557918 224 ntBASIC2.61□□□□□ -1.99
HOXD8P13378 AC091304.10-201ENST00000641554 121 ntBASIC2.61□□□□□ -1.99
HOXD8P13378 SNORA26.6-201ENST00000391256 115 ntBASIC2.6□□□□□ -1.99
HOXD8P13378 HMGN1P33-201ENST00000432945 451 ntBASIC2.6□□□□□ -1.99
HOXD8P13378 RNU6-65P-201ENST00000516332 98 ntBASIC2.6□□□□□ -1.99
HOXD8P13378 RNU6-1018P-201ENST00000516577 106 ntBASIC2.6□□□□□ -1.99
HOXD8P13378 MIR5194-201ENST00000582634 120 ntBASIC2.6□□□□□ -1.99
HOXD8P13378 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HOXD8P13378 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
HOXD8P13378 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HOXD8P13378 AL442644.1-201ENST00000454390 3105 ntBASIC2.59□□□□□ -1.99
HOXD8P13378 RNU6-112P-201ENST00000363599 104 ntBASIC2.59□□□□□ -1.99
HOXD8P13378 Y_RNA.244-201ENST00000364484 109 ntBASIC2.59□□□□□ -1.99
HOXD8P13378 Y_RNA.377-201ENST00000365644 108 ntBASIC2.59□□□□□ -1.99
HOXD8P13378 Y_RNA.430-201ENST00000384081 110 ntBASIC2.59□□□□□ -1.99
HOXD8P13378 SNORA24-201ENST00000384096 131 ntBASIC2.59□□□□□ -1.99
HOXD8P13378 SNORD116-22-201ENST00000384430 92 ntBASIC2.59□□□□□ -1.99
HOXD8P13378 HMGN2P39-201ENST00000398005 273 ntBASIC2.59□□□□□ -1.99
HOXD8P13378 RNA5SP225-201ENST00000410874 135 ntBASIC2.59□□□□□ -1.99
HOXD8P13378 BTF3P4-201ENST00000418852 495 ntBASIC2.59□□□□□ -1.99
HOXD8P13378 AC245047.7-201ENST00000440265 293 ntBASIC2.59□□□□□ -1.99
HOXD8P13378 AL353813.1-201ENST00000440700 253 ntBASIC2.59□□□□□ -1.99
HOXD8P13378 RNU6-826P-201ENST00000516827 104 ntBASIC2.59□□□□□ -1.99
HOXD8P13378 SUB1P4-201ENST00000566062 339 ntBASIC2.59□□□□□ -1.99
HOXD8P13378 AL353997.5-201ENST00000618886 171 ntBASIC2.59□□□□□ -1.99
HOXD8P13378 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
HOXD8P13378 RNU1-51P-201ENST00000365345 176 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms