Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-0.84□□□□□ -2.54
COL6A3P12111 AC008507.4-201ENST00000585464 127 ntBASIC-0.84□□□□□ -2.54
COL6A3P12111 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.84□□□□□ -2.54
COL6A3P12111 RNU4-1-201ENST00000363925 141 ntBASIC-0.84□□□□□ -2.54
COL6A3P12111 RNU6-560P-201ENST00000364007 108 ntBASIC-0.84□□□□□ -2.54
COL6A3P12111 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.84□□□□□ -2.54
COL6A3P12111 RNY1P13-201ENST00000365030 105 ntBASIC-0.84□□□□□ -2.54
COL6A3P12111 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.84□□□□□ -2.54
COL6A3P12111 MIR1284-201ENST00000408337 120 ntBASIC-0.84□□□□□ -2.54
COL6A3P12111 RNU6-938P-201ENST00000411285 103 ntBASIC-0.84□□□□□ -2.54
COL6A3P12111 AC108059.2-201ENST00000434626 151 ntBASIC-0.84□□□□□ -2.54
COL6A3P12111 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-0.84□□□□□ -2.54
COL6A3P12111 RNU7-116P-201ENST00000516940 62 ntBASIC-0.84□□□□□ -2.54
COL6A3P12111 MIR548AG2-201ENST00000581228 64 ntBASIC-0.84□□□□□ -2.54
COL6A3P12111 MIR2681-201ENST00000581814 105 ntBASIC-0.84□□□□□ -2.54
COL6A3P12111 AL138960.2-201ENST00000625145 535 ntBASIC-0.84□□□□□ -2.54
COL6A3P12111 SNORD115-30-201ENST00000364117 82 ntBASIC-0.85□□□□□ -2.55
COL6A3P12111 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.85□□□□□ -2.55
COL6A3P12111 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.85□□□□□ -2.55
COL6A3P12111 RNU6-54P-201ENST00000365563 107 ntBASIC-0.85□□□□□ -2.55
COL6A3P12111 AL078595.1-201ENST00000404458 226 ntBASIC-0.85□□□□□ -2.55
COL6A3P12111 Y_RNA.591-201ENST00000410228 104 ntBASIC-0.85□□□□□ -2.55
COL6A3P12111 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-0.85□□□□□ -2.55
COL6A3P12111 MTATP6P13-201ENST00000438531 667 ntBASIC-0.85□□□□□ -2.55
COL6A3P12111 RPL22P17-201ENST00000438729 315 ntBASIC-0.85□□□□□ -2.55
COL6A3P12111 RNU6-1102P-201ENST00000516149 96 ntBASIC-0.85□□□□□ -2.55
COL6A3P12111 AC127455.1-201ENST00000565496 145 ntBASIC-0.85□□□□□ -2.55
COL6A3P12111 MIR5693-201ENST00000577722 73 ntBASIC-0.85□□□□□ -2.55
COL6A3P12111 AL008718.3-201ENST00000610217 321 ntBASIC-0.85□□□□□ -2.55
COL6A3P12111 RNY1P12-201ENST00000364251 105 ntBASIC-0.85□□□□□ -2.55
COL6A3P12111 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.85□□□□□ -2.55
COL6A3P12111 RNU6-601P-201ENST00000384540 107 ntBASIC-0.85□□□□□ -2.55
COL6A3P12111 AL603914.1-201ENST00000401964 204 ntBASIC-0.85□□□□□ -2.55
COL6A3P12111 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-0.85□□□□□ -2.55
COL6A3P12111 AC023449.1-201ENST00000454464 154 ntBASIC-0.85□□□□□ -2.55
COL6A3P12111 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.85□□□□□ -2.55
COL6A3P12111 MIR466-201ENST00000580653 84 ntBASIC-0.85□□□□□ -2.55
COL6A3P12111 AL080274.1-201ENST00000605565 220 ntBASIC-0.85□□□□□ -2.55
COL6A3P12111 MIR410-201ENST00000362222 80 ntBASIC-0.86□□□□□ -2.55
COL6A3P12111 SNORD115.1-201ENST00000391109 76 ntBASIC-0.86□□□□□ -2.55
COL6A3P12111 RNU6-757P-201ENST00000410334 100 ntBASIC-0.86□□□□□ -2.55
COL6A3P12111 UBE2V1P12-201ENST00000503954 474 ntBASIC-0.86□□□□□ -2.55
COL6A3P12111 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.86□□□□□ -2.55
COL6A3P12111 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.86□□□□□ -2.55
COL6A3P12111 MIR3674-201ENST00000636576 68 ntBASIC-0.86□□□□□ -2.55
COL6A3P12111 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.86□□□□□ -2.55
COL6A3P12111 RNU6-746P-201ENST00000384112 109 ntBASIC-0.86□□□□□ -2.55
COL6A3P12111 SNORA40.2-201ENST00000390847 128 ntBASIC-0.86□□□□□ -2.55
COL6A3P12111 MTND3P9-201ENST00000429526 346 ntBASIC-0.86□□□□□ -2.55
COL6A3P12111 MTND3P23-201ENST00000431980 347 ntBASIC-0.86□□□□□ -2.55
COL6A3P12111 AC009961.2-201ENST00000435771 251 ntBASIC-0.86□□□□□ -2.55
COL6A3P12111 SNORA40.9-201ENST00000515895 93 ntBASIC-0.86□□□□□ -2.55
COL6A3P12111 MIR3920-201ENST00000581751 86 ntBASIC-0.86□□□□□ -2.55
COL6A3P12111 AC098479.1-201ENST00000609225 154 ntBASIC-0.86□□□□□ -2.55
COL6A3P12111 SNORD115-33-201ENST00000363723 82 ntBASIC-0.86□□□□□ -2.55
COL6A3P12111 RNU6-266P-201ENST00000364225 107 ntBASIC-0.86□□□□□ -2.55
COL6A3P12111 RNU6-831P-201ENST00000384548 107 ntBASIC-0.86□□□□□ -2.55
COL6A3P12111 BX295541.1-201ENST00000417774 250 ntBASIC-0.86□□□□□ -2.55
COL6A3P12111 SNORD36C-201ENST00000516733 66 ntBASIC-0.86□□□□□ -2.55
COL6A3P12111 RNU6-1003P-201ENST00000517099 105 ntBASIC-0.86□□□□□ -2.55
COL6A3P12111 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.87□□□□□ -2.55
COL6A3P12111 Y_RNA.134-201ENST00000363435 105 ntBASIC-0.87□□□□□ -2.55
COL6A3P12111 MIR519E-201ENST00000385075 84 ntBASIC-0.87□□□□□ -2.55
COL6A3P12111 SNORA26.4-201ENST00000391188 123 ntBASIC-0.87□□□□□ -2.55
COL6A3P12111 AL031003.1-201ENST00000404229 172 ntBASIC-0.87□□□□□ -2.55
COL6A3P12111 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-0.87□□□□□ -2.55
COL6A3P12111 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-0.87□□□□□ -2.55
COL6A3P12111 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.87□□□□□ -2.55
COL6A3P12111 RNY1P16-201ENST00000363063 111 ntBASIC-0.87□□□□□ -2.55
COL6A3P12111 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.87□□□□□ -2.55
COL6A3P12111 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.87□□□□□ -2.55
COL6A3P12111 RNU6-468P-201ENST00000384003 109 ntBASIC-0.87□□□□□ -2.55
COL6A3P12111 RNU6-192P-201ENST00000391253 100 ntBASIC-0.87□□□□□ -2.55
COL6A3P12111 MTCO2P30-201ENST00000503662 364 ntBASIC-0.87□□□□□ -2.55
COL6A3P12111 SCARNA24.1-201ENST00000516465 137 ntBASIC-0.87□□□□□ -2.55
COL6A3P12111 AC055872.1-201ENST00000570978 278 ntBASIC-0.87□□□□□ -2.55
COL6A3P12111 MIR4500-201ENST00000579472 76 ntBASIC-0.87□□□□□ -2.55
COL6A3P12111 RN7SKP299-201ENST00000606679 301 ntBASIC-0.87□□□□□ -2.55
COL6A3P12111 AC022140.2-201ENST00000623500 188 ntBASIC-0.87□□□□□ -2.55
COL6A3P12111 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.88□□□□□ -2.55
COL6A3P12111 RNU6-207P-201ENST00000384137 107 ntBASIC-0.88□□□□□ -2.55
COL6A3P12111 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.88□□□□□ -2.55
COL6A3P12111 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.88□□□□□ -2.55
COL6A3P12111 AC097510.1-201ENST00000510945 133 ntBASIC-0.88□□□□□ -2.55
COL6A3P12111 AP003357.1-201ENST00000604497 148 ntBASIC-0.88□□□□□ -2.55
COL6A3P12111 AC122108.2-201ENST00000611946 526 ntBASIC-0.88□□□□□ -2.55
COL6A3P12111 MIR6773-201ENST00000612812 74 ntBASIC-0.88□□□□□ -2.55
COL6A3P12111 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.88□□□□□ -2.55
COL6A3P12111 MIR181A1-201ENST00000385026 110 ntBASIC-0.88□□□□□ -2.55
COL6A3P12111 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.88□□□□□ -2.55
COL6A3P12111 SNORA36B-201ENST00000410438 131 ntBASIC-0.88□□□□□ -2.55
COL6A3P12111 RNU6-1114P-201ENST00000516022 107 ntBASIC-0.88□□□□□ -2.55
COL6A3P12111 RNU6-551P-201ENST00000516661 103 ntBASIC-0.88□□□□□ -2.55
COL6A3P12111 MTND4LP18-201ENST00000526864 291 ntBASIC-0.88□□□□□ -2.55
COL6A3P12111 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-0.88□□□□□ -2.55
COL6A3P12111 AL049861.1-201ENST00000603130 150 ntBASIC-0.88□□□□□ -2.55
COL6A3P12111 AL133215.3-201ENST00000609801 448 ntBASIC-0.88□□□□□ -2.55
COL6A3P12111 SNORD114-10-201ENST00000363409 72 ntBASIC-0.88□□□□□ -2.55
COL6A3P12111 MIR582-201ENST00000365731 98 ntBASIC-0.88□□□□□ -2.55
COL6A3P12111 SNORA18-201ENST00000384416 132 ntBASIC-0.88□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms