Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 RNA5SP259-201ENST00000365541 109 ntBASIC2.45□□□□□ -2.02
PDGFAP04085 MIR513A1-201ENST00000385138 129 ntBASIC2.45□□□□□ -2.02
PDGFAP04085 snoU13.26-201ENST00000459452 105 ntBASIC2.45□□□□□ -2.02
PDGFAP04085 MIR4694-201ENST00000578534 80 ntBASIC2.45□□□□□ -2.02
PDGFAP04085 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
PDGFAP04085 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.44□□□□□ -2.02
PDGFAP04085 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PDGFAP04085 ZNF658B-202ENST00000615961 3375 ntBASIC2.44□□□□□ -2.02
PDGFAP04085 Y_RNA.93-201ENST00000363066 109 ntBASIC2.44□□□□□ -2.02
PDGFAP04085 Y_RNA.107-201ENST00000363190 121 ntBASIC2.44□□□□□ -2.02
PDGFAP04085 RNU6-616P-201ENST00000384353 107 ntBASIC2.44□□□□□ -2.02
PDGFAP04085 AL161935.2-201ENST00000414627 60 ntBASIC2.44□□□□□ -2.02
PDGFAP04085 SCARNA23-201ENST00000516060 130 ntBASIC2.44□□□□□ -2.02
PDGFAP04085 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.44□□□□□ -2.02
PDGFAP04085 Z97988.1-201ENST00000637697 135 ntBASIC2.44□□□□□ -2.02
PDGFAP04085 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
PDGFAP04085 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.43□□□□□ -2.02
PDGFAP04085 RNU6-1099P-201ENST00000363533 107 ntBASIC2.43□□□□□ -2.02
PDGFAP04085 Y_RNA.360-201ENST00000365512 102 ntBASIC2.43□□□□□ -2.02
PDGFAP04085 SNORA32-201ENST00000384072 121 ntBASIC2.43□□□□□ -2.02
PDGFAP04085 MIR504-201ENST00000385065 83 ntBASIC2.43□□□□□ -2.02
PDGFAP04085 Y_RNA.601-201ENST00000410500 113 ntBASIC2.43□□□□□ -2.02
PDGFAP04085 CYP3A52P-201ENST00000563326 91 ntBASIC2.43□□□□□ -2.02
PDGFAP04085 SNORD114-30-201ENST00000364448 72 ntBASIC2.42□□□□□ -2.02
PDGFAP04085 SNORA7.5-201ENST00000410672 110 ntBASIC2.42□□□□□ -2.02
PDGFAP04085 MTATP8P2-201ENST00000435212 202 ntBASIC2.42□□□□□ -2.02
PDGFAP04085 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.42□□□□□ -2.02
PDGFAP04085 RNA5SP320-201ENST00000516263 124 ntBASIC2.42□□□□□ -2.02
PDGFAP04085 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.42□□□□□ -2.02
PDGFAP04085 MIR4769-201ENST00000584126 77 ntBASIC2.42□□□□□ -2.02
PDGFAP04085 MIR4251-201ENST00000635819 61 ntBASIC2.42□□□□□ -2.02
PDGFAP04085 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
PDGFAP04085 RNU6-1131P-201ENST00000364955 107 ntBASIC2.41□□□□□ -2.02
PDGFAP04085 SNORA6-201ENST00000384033 151 ntBASIC2.41□□□□□ -2.02
PDGFAP04085 Z98742.3-201ENST00000418637 326 ntBASIC2.41□□□□□ -2.02
PDGFAP04085 AC244636.1-201ENST00000421152 228 ntBASIC2.41□□□□□ -2.02
PDGFAP04085 AC245047.7-201ENST00000440265 293 ntBASIC2.41□□□□□ -2.02
PDGFAP04085 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.41□□□□□ -2.02
PDGFAP04085 snoU13.15-201ENST00000459407 104 ntBASIC2.41□□□□□ -2.02
PDGFAP04085 RNA5SP82-201ENST00000516707 92 ntBASIC2.41□□□□□ -2.02
PDGFAP04085 AL773524.1-201ENST00000614065 229 ntBASIC2.41□□□□□ -2.02
PDGFAP04085 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
PDGFAP04085 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.41□□□□□ -2.02
PDGFAP04085 MIR26A1-201ENST00000362205 77 ntBASIC2.4□□□□□ -2.03
PDGFAP04085 RNU6-832P-201ENST00000363319 107 ntBASIC2.4□□□□□ -2.03
PDGFAP04085 Y_RNA.220-201ENST00000364244 109 ntBASIC2.4□□□□□ -2.03
PDGFAP04085 MIR605-201ENST00000385078 83 ntBASIC2.4□□□□□ -2.03
PDGFAP04085 MIR577-201ENST00000385196 96 ntBASIC2.4□□□□□ -2.03
PDGFAP04085 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
PDGFAP04085 MIR1270-201ENST00000459320 83 ntBASIC2.4□□□□□ -2.03
PDGFAP04085 RNA5SP282-201ENST00000516355 108 ntBASIC2.4□□□□□ -2.03
PDGFAP04085 SNORA9.3-201ENST00000516383 129 ntBASIC2.4□□□□□ -2.03
PDGFAP04085 SNORD111.1-201ENST00000516421 86 ntBASIC2.4□□□□□ -2.03
PDGFAP04085 RNU6-1018P-201ENST00000516577 106 ntBASIC2.4□□□□□ -2.03
PDGFAP04085 MIR4287-201ENST00000579398 78 ntBASIC2.4□□□□□ -2.03
PDGFAP04085 MIR4524B-201ENST00000581569 115 ntBASIC2.4□□□□□ -2.03
PDGFAP04085 MIR3935-201ENST00000583472 104 ntBASIC2.4□□□□□ -2.03
PDGFAP04085 AL137847.3-201ENST00000611521 109 ntBASIC2.4□□□□□ -2.03
PDGFAP04085 MIR8065-201ENST00000620577 100 ntBASIC2.4□□□□□ -2.03
PDGFAP04085 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.4□□□□□ -2.03
PDGFAP04085 RNA5SP48-201ENST00000363969 126 ntBASIC2.39□□□□□ -2.03
PDGFAP04085 RNU6-439P-201ENST00000384188 106 ntBASIC2.39□□□□□ -2.03
PDGFAP04085 RNU6-602P-201ENST00000411155 105 ntBASIC2.39□□□□□ -2.03
PDGFAP04085 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.39□□□□□ -2.03
PDGFAP04085 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
PDGFAP04085 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PDGFAP04085 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
PDGFAP04085 SNORA16B-201ENST00000364674 135 ntBASIC2.38□□□□□ -2.03
PDGFAP04085 RNU6-294P-201ENST00000364999 102 ntBASIC2.38□□□□□ -2.03
PDGFAP04085 SNORA18-201ENST00000384416 132 ntBASIC2.38□□□□□ -2.03
PDGFAP04085 MIR144-201ENST00000384886 86 ntBASIC2.38□□□□□ -2.03
PDGFAP04085 RNU6-679P-201ENST00000391003 106 ntBASIC2.38□□□□□ -2.03
PDGFAP04085 RNU7-41P-201ENST00000515917 61 ntBASIC2.38□□□□□ -2.03
PDGFAP04085 RNU6-521P-201ENST00000516663 105 ntBASIC2.38□□□□□ -2.03
PDGFAP04085 AC022254.1-201ENST00000567857 235 ntBASIC2.38□□□□□ -2.03
PDGFAP04085 MIR548AO-201ENST00000579992 96 ntBASIC2.38□□□□□ -2.03
PDGFAP04085 AL357312.1-201ENST00000603879 298 ntBASIC2.38□□□□□ -2.03
PDGFAP04085 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
PDGFAP04085 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
PDGFAP04085 RNU6-342P-201ENST00000384521 104 ntBASIC2.37□□□□□ -2.03
PDGFAP04085 RNU4-53P-201ENST00000410828 140 ntBASIC2.37□□□□□ -2.03
PDGFAP04085 MIR4713-201ENST00000582691 75 ntBASIC2.37□□□□□ -2.03
PDGFAP04085 MIR4635-201ENST00000583759 79 ntBASIC2.37□□□□□ -2.03
PDGFAP04085 MIR6895-201ENST00000613497 78 ntBASIC2.37□□□□□ -2.03
PDGFAP04085 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.37□□□□□ -2.03
PDGFAP04085 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.36□□□□□ -2.03
PDGFAP04085 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PDGFAP04085 Y_RNA.377-201ENST00000365644 108 ntBASIC2.36□□□□□ -2.03
PDGFAP04085 SNORD38B-201ENST00000384690 67 ntBASIC2.36□□□□□ -2.03
PDGFAP04085 RNU7-35P-201ENST00000517174 62 ntBASIC2.36□□□□□ -2.03
PDGFAP04085 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.36□□□□□ -2.03
PDGFAP04085 MIR3605-201ENST00000583214 100 ntBASIC2.36□□□□□ -2.03
PDGFAP04085 SNORD38B-202ENST00000625943 69 ntBASIC2.36□□□□□ -2.03
PDGFAP04085 AL512310.12-203ENST00000640543 90 ntBASIC2.36□□□□□ -2.03
PDGFAP04085 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
PDGFAP04085 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PDGFAP04085 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.35□□□□□ -2.03
PDGFAP04085 MIR488-201ENST00000365739 83 ntBASIC2.35□□□□□ -2.03
PDGFAP04085 RNU6-49P-201ENST00000384256 107 ntBASIC2.35□□□□□ -2.03
PDGFAP04085 Y_RNA.466-201ENST00000384294 113 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms