Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 RNU4-53P-201ENST00000410828 140 ntBASIC3.14□□□□□ -1.91
ALDH1A1P00352 AC092185.1-201ENST00000491371 97 ntBASIC3.14□□□□□ -1.91
ALDH1A1P00352 RNU7-12P-201ENST00000516030 62 ntBASIC3.14□□□□□ -1.91
ALDH1A1P00352 Y_RNA.676-201ENST00000516393 96 ntBASIC3.14□□□□□ -1.91
ALDH1A1P00352 MIR8055-201ENST00000610739 97 ntBASIC3.14□□□□□ -1.91
ALDH1A1P00352 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ALDH1A1P00352 AC245060.5-201ENST00000610778 3293 ntBASIC3.13□□□□□ -1.91
ALDH1A1P00352 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
ALDH1A1P00352 RNU6-23P-201ENST00000363283 107 ntBASIC3.13□□□□□ -1.91
ALDH1A1P00352 RNA5SP133-201ENST00000363368 119 ntBASIC3.13□□□□□ -1.91
ALDH1A1P00352 SNORD114-10-201ENST00000363409 72 ntBASIC3.13□□□□□ -1.91
ALDH1A1P00352 Y_RNA.168-201ENST00000363740 102 ntBASIC3.13□□□□□ -1.91
ALDH1A1P00352 SNORD21-201ENST00000383953 95 ntBASIC3.13□□□□□ -1.91
ALDH1A1P00352 AC108210.2-201ENST00000503681 201 ntBASIC3.13□□□□□ -1.91
ALDH1A1P00352 RNU7-79P-201ENST00000516082 62 ntBASIC3.13□□□□□ -1.91
ALDH1A1P00352 RNU1-143P-201ENST00000516296 146 ntBASIC3.13□□□□□ -1.91
ALDH1A1P00352 RNU7-137P-201ENST00000516788 62 ntBASIC3.13□□□□□ -1.91
ALDH1A1P00352 MIR3134-201ENST00000579433 74 ntBASIC3.13□□□□□ -1.91
ALDH1A1P00352 U1.23-201ENST00000610293 146 ntBASIC3.13□□□□□ -1.91
ALDH1A1P00352 RNU1-68P-201ENST00000615382 146 ntBASIC3.13□□□□□ -1.91
ALDH1A1P00352 MIR8065-201ENST00000620577 100 ntBASIC3.13□□□□□ -1.91
ALDH1A1P00352 U1.39-201ENST00000621562 146 ntBASIC3.13□□□□□ -1.91
ALDH1A1P00352 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ALDH1A1P00352 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
ALDH1A1P00352 RNU6-1019P-201ENST00000364424 107 ntBASIC3.12□□□□□ -1.91
ALDH1A1P00352 SNORD38.2-201ENST00000384470 69 ntBASIC3.12□□□□□ -1.91
ALDH1A1P00352 MIR512-1-201ENST00000384913 84 ntBASIC3.12□□□□□ -1.91
ALDH1A1P00352 RNU6-447P-201ENST00000410293 104 ntBASIC3.12□□□□□ -1.91
ALDH1A1P00352 RNU6-1118P-201ENST00000410382 104 ntBASIC3.12□□□□□ -1.91
ALDH1A1P00352 RNU6-1076P-201ENST00000410397 104 ntBASIC3.12□□□□□ -1.91
ALDH1A1P00352 RNU6-355P-201ENST00000410427 104 ntBASIC3.12□□□□□ -1.91
ALDH1A1P00352 RNU6-791P-201ENST00000410467 104 ntBASIC3.12□□□□□ -1.91
ALDH1A1P00352 RNU6-705P-201ENST00000410601 104 ntBASIC3.12□□□□□ -1.91
ALDH1A1P00352 RNU6-1100P-201ENST00000410691 104 ntBASIC3.12□□□□□ -1.91
ALDH1A1P00352 RNU6-860P-201ENST00000410860 104 ntBASIC3.12□□□□□ -1.91
ALDH1A1P00352 RNU6-1217P-201ENST00000411276 104 ntBASIC3.12□□□□□ -1.91
ALDH1A1P00352 RNU6-785P-201ENST00000411324 104 ntBASIC3.12□□□□□ -1.91
ALDH1A1P00352 RNA5SP282-201ENST00000516355 108 ntBASIC3.12□□□□□ -1.91
ALDH1A1P00352 RNU6-557P-201ENST00000516842 110 ntBASIC3.12□□□□□ -1.91
ALDH1A1P00352 U6.90-201ENST00000614007 104 ntBASIC3.12□□□□□ -1.91
ALDH1A1P00352 AC105081.1-201ENST00000617727 106 ntBASIC3.12□□□□□ -1.91
ALDH1A1P00352 U6.70-201ENST00000620287 104 ntBASIC3.12□□□□□ -1.91
ALDH1A1P00352 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.11□□□□□ -1.91
ALDH1A1P00352 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ALDH1A1P00352 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ALDH1A1P00352 MIR26A1-201ENST00000362205 77 ntBASIC3.11□□□□□ -1.91
ALDH1A1P00352 MIR148B-201ENST00000362252 99 ntBASIC3.11□□□□□ -1.91
ALDH1A1P00352 MIRLET7A1-201ENST00000362295 80 ntBASIC3.11□□□□□ -1.91
ALDH1A1P00352 SNORA40.18-201ENST00000391200 128 ntBASIC3.11□□□□□ -1.91
ALDH1A1P00352 RNU6-1086P-201ENST00000410930 100 ntBASIC3.11□□□□□ -1.91
ALDH1A1P00352 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.11□□□□□ -1.91
ALDH1A1P00352 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.11□□□□□ -1.91
ALDH1A1P00352 SCARNA18B-201ENST00000458806 135 ntBASIC3.11□□□□□ -1.91
ALDH1A1P00352 RNU7-48P-201ENST00000458875 63 ntBASIC3.11□□□□□ -1.91
ALDH1A1P00352 SNORD4B-201ENST00000459083 72 ntBASIC3.11□□□□□ -1.91
ALDH1A1P00352 SNORD123-201ENST00000459473 70 ntBASIC3.11□□□□□ -1.91
ALDH1A1P00352 RNA5SP380-201ENST00000517190 98 ntBASIC3.11□□□□□ -1.91
ALDH1A1P00352 MTND5P40-201ENST00000559945 246 ntBASIC3.11□□□□□ -1.91
ALDH1A1P00352 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ALDH1A1P00352 AC108206.1-201ENST00000570186 4159 ntBASIC3.1□□□□□ -1.91
ALDH1A1P00352 Y_RNA.98-201ENST00000363109 102 ntBASIC3.1□□□□□ -1.91
ALDH1A1P00352 Y_RNA.537-201ENST00000384626 109 ntBASIC3.1□□□□□ -1.91
ALDH1A1P00352 AL603825.1-201ENST00000438481 80 ntBASIC3.1□□□□□ -1.91
ALDH1A1P00352 AC234781.5-201ENST00000508429 271 ntBASIC3.1□□□□□ -1.91
ALDH1A1P00352 SNORA64.4-201ENST00000516632 81 ntBASIC3.1□□□□□ -1.91
ALDH1A1P00352 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
ALDH1A1P00352 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
ALDH1A1P00352 RNA5SP383-201ENST00000362934 120 ntBASIC3.09□□□□□ -1.91
ALDH1A1P00352 RNU4-32P-201ENST00000363404 141 ntBASIC3.09□□□□□ -1.91
ALDH1A1P00352 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
ALDH1A1P00352 AL356320.1-201ENST00000429616 163 ntBASIC3.09□□□□□ -1.91
ALDH1A1P00352 AL591806.2-201ENST00000433122 173 ntBASIC3.09□□□□□ -1.91
ALDH1A1P00352 snoU13.16-201ENST00000459350 104 ntBASIC3.09□□□□□ -1.91
ALDH1A1P00352 AC069114.2-201ENST00000604699 304 ntBASIC3.09□□□□□ -1.91
ALDH1A1P00352 U4.3-201ENST00000621047 82 ntBASIC3.09□□□□□ -1.91
ALDH1A1P00352 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
ALDH1A1P00352 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ALDH1A1P00352 RNU6-602P-201ENST00000411155 105 ntBASIC3.08□□□□□ -1.92
ALDH1A1P00352 AC093850.1-201ENST00000454121 251 ntBASIC3.08□□□□□ -1.92
ALDH1A1P00352 AC125388.1-201ENST00000459631 156 ntBASIC3.08□□□□□ -1.92
ALDH1A1P00352 AC104027.1-201ENST00000521887 300 ntBASIC3.08□□□□□ -1.92
ALDH1A1P00352 AC005786.1-201ENST00000588553 154 ntBASIC3.08□□□□□ -1.92
ALDH1A1P00352 AP001362.1-201ENST00000625165 124 ntBASIC3.08□□□□□ -1.92
ALDH1A1P00352 Z97988.1-201ENST00000637697 135 ntBASIC3.08□□□□□ -1.92
ALDH1A1P00352 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
ALDH1A1P00352 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
ALDH1A1P00352 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
ALDH1A1P00352 HSBP1P2-201ENST00000299671 229 ntBASIC3.07□□□□□ -1.92
ALDH1A1P00352 RNU6-686P-201ENST00000364839 107 ntBASIC3.07□□□□□ -1.92
ALDH1A1P00352 RNU6-411P-201ENST00000384451 107 ntBASIC3.07□□□□□ -1.92
ALDH1A1P00352 MIR1265-201ENST00000408444 86 ntBASIC3.07□□□□□ -1.92
ALDH1A1P00352 RN7SKP223-201ENST00000410582 62 ntBASIC3.07□□□□□ -1.92
ALDH1A1P00352 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC3.07□□□□□ -1.92
ALDH1A1P00352 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.07□□□□□ -1.92
ALDH1A1P00352 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
ALDH1A1P00352 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
ALDH1A1P00352 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.06□□□□□ -1.92
ALDH1A1P00352 RNA5SP289-201ENST00000362332 137 ntBASIC3.06□□□□□ -1.92
ALDH1A1P00352 SNORA63.2-201ENST00000362603 126 ntBASIC3.06□□□□□ -1.92
ALDH1A1P00352 Y_RNA.340-201ENST00000365330 92 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 165.7 ms