Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 AC055731.1-201ENST00000474387 401 ntBASIC5.19□□□□□ -1.58
MSH5O43196 RNU2-58P-201ENST00000516403 183 ntBASIC5.19□□□□□ -1.58
MSH5O43196 MIR548AL-201ENST00000578416 97 ntBASIC5.19□□□□□ -1.58
MSH5O43196 MIR4264-201ENST00000583520 66 ntBASIC5.19□□□□□ -1.58
MSH5O43196 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
MSH5O43196 AC027290.2-201ENST00000623210 18662 ntBASIC5.19□□□□□ -1.58
MSH5O43196 LINC02471-203ENST00000641941 4752 ntBASIC5.19□□□□□ -1.58
MSH5O43196 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
MSH5O43196 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
MSH5O43196 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC5.18□□□□□ -1.58
MSH5O43196 U2.7-201ENST00000619197 100 ntBASIC5.18□□□□□ -1.58
MSH5O43196 U6.105-201ENST00000637379 88 ntBASIC5.18□□□□□ -1.58
MSH5O43196 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
MSH5O43196 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
MSH5O43196 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC5.17□□□□□ -1.58
MSH5O43196 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
MSH5O43196 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
MSH5O43196 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
MSH5O43196 AC099513.1-201ENST00000490423 301 ntBASIC5.17□□□□□ -1.58
MSH5O43196 AC104619.4-201ENST00000510773 249 ntBASIC5.17□□□□□ -1.58
MSH5O43196 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC5.17□□□□□ -1.58
MSH5O43196 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
MSH5O43196 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
MSH5O43196 SNORA60-201ENST00000362396 134 ntBASIC5.16□□□□□ -1.58
MSH5O43196 RNU6-1162P-201ENST00000384443 104 ntBASIC5.16□□□□□ -1.58
MSH5O43196 RN7SL293P-201ENST00000481765 281 ntBASIC5.16□□□□□ -1.58
MSH5O43196 RNU6-419P-201ENST00000517030 63 ntBASIC5.16□□□□□ -1.58
MSH5O43196 AC025627.2-201ENST00000576220 160 ntBASIC5.16□□□□□ -1.58
MSH5O43196 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
MSH5O43196 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
MSH5O43196 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC5.15□□□□□ -1.58
MSH5O43196 RNU1-70P-201ENST00000362618 164 ntBASIC5.15□□□□□ -1.59
MSH5O43196 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
MSH5O43196 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
MSH5O43196 AL035423.1-201ENST00000420331 213 ntBASIC5.15□□□□□ -1.59
MSH5O43196 SNORA31.26-201ENST00000517250 137 ntBASIC5.15□□□□□ -1.59
MSH5O43196 IGLVVI-22-1-201ENST00000521183 211 ntBASIC5.15□□□□□ -1.59
MSH5O43196 MIR5684-201ENST00000585074 65 ntBASIC5.15□□□□□ -1.59
MSH5O43196 MIR3922-201ENST00000585192 84 ntBASIC5.15□□□□□ -1.59
MSH5O43196 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
MSH5O43196 AC244205.2-202ENST00000635781 342 ntBASIC5.15□□□□□ -1.59
MSH5O43196 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
MSH5O43196 RNU6-822P-201ENST00000362707 106 ntBASIC5.14□□□□□ -1.59
MSH5O43196 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
MSH5O43196 MIR1179-201ENST00000408703 91 ntBASIC5.14□□□□□ -1.59
MSH5O43196 SNORD42B-201ENST00000458893 67 ntBASIC5.14□□□□□ -1.59
MSH5O43196 RPL29P14-201ENST00000495837 428 ntBASIC5.14□□□□□ -1.59
MSH5O43196 RNA5SP179-201ENST00000517284 121 ntBASIC5.14□□□□□ -1.59
MSH5O43196 AC138907.6-201ENST00000568401 126 ntBASIC5.14□□□□□ -1.59
MSH5O43196 AC138869.1-201ENST00000568623 124 ntBASIC5.14□□□□□ -1.59
MSH5O43196 MIR4709-201ENST00000577272 72 ntBASIC5.14□□□□□ -1.59
MSH5O43196 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC5.14□□□□□ -1.59
MSH5O43196 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
MSH5O43196 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
MSH5O43196 SNORD35B-201ENST00000363660 87 ntBASIC5.13□□□□□ -1.59
MSH5O43196 RNU6-396P-201ENST00000365369 105 ntBASIC5.13□□□□□ -1.59
MSH5O43196 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC5.13□□□□□ -1.59
MSH5O43196 AC087499.8-201ENST00000578406 226 ntBASIC5.13□□□□□ -1.59
MSH5O43196 AP000942.3-201ENST00000603702 160 ntBASIC5.13□□□□□ -1.59
MSH5O43196 AC091167.4-201ENST00000605079 184 ntBASIC5.13□□□□□ -1.59
MSH5O43196 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC5.13□□□□□ -1.59
MSH5O43196 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
MSH5O43196 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
MSH5O43196 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
MSH5O43196 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
MSH5O43196 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC5.12□□□□□ -1.59
MSH5O43196 Y_RNA.325-201ENST00000365171 122 ntBASIC5.12□□□□□ -1.59
MSH5O43196 SNORA3.3-201ENST00000408712 125 ntBASIC5.12□□□□□ -1.59
MSH5O43196 S100A11P1-201ENST00000477525 312 ntBASIC5.12□□□□□ -1.59
MSH5O43196 AC023141.11-201ENST00000508864 202 ntBASIC5.12□□□□□ -1.59
MSH5O43196 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
MSH5O43196 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
MSH5O43196 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
MSH5O43196 RNA5SP48-201ENST00000363969 126 ntBASIC5.11□□□□□ -1.59
MSH5O43196 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC5.11□□□□□ -1.59
MSH5O43196 MIR7975-201ENST00000619350 68 ntBASIC5.11□□□□□ -1.59
MSH5O43196 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC5.11□□□□□ -1.59
MSH5O43196 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
MSH5O43196 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
MSH5O43196 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
MSH5O43196 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5.1□□□□□ -1.59
MSH5O43196 MIR424-201ENST00000362227 98 ntBASIC5.1□□□□□ -1.59
MSH5O43196 Y_RNA.13-201ENST00000362403 112 ntBASIC5.1□□□□□ -1.59
MSH5O43196 SNORD115-44-201ENST00000365391 82 ntBASIC5.1□□□□□ -1.59
MSH5O43196 ARF4P2-201ENST00000430209 526 ntBASIC5.1□□□□□ -1.59
MSH5O43196 MIR3186-201ENST00000577404 85 ntBASIC5.1□□□□□ -1.59
MSH5O43196 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.09□□□□□ -1.59
MSH5O43196 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC5.09□□□□□ -1.59
MSH5O43196 IPO8P1-201ENST00000455509 3109 ntBASIC5.09□□□□□ -1.59
MSH5O43196 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
MSH5O43196 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
MSH5O43196 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
MSH5O43196 MIR521-2-201ENST00000384818 87 ntBASIC5.08□□□□□ -1.6
MSH5O43196 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC5.08□□□□□ -1.6
MSH5O43196 uc_338.32-201ENST00000615087 172 ntBASIC5.08□□□□□ -1.6
MSH5O43196 AL449363.1-201ENST00000617815 186 ntBASIC5.08□□□□□ -1.6
MSH5O43196 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC5.07□□□□□ -1.6
MSH5O43196 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
MSH5O43196 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
MSH5O43196 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 176.3 ms