Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.02□□□□□ -1.93
H3BM21 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
H3BM21 SNORA25.4-201ENST00000363666 124 ntBASIC3.01□□□□□ -1.93
H3BM21 SNORA5B-201ENST00000363786 132 ntBASIC3.01□□□□□ -1.93
H3BM21 U8.9-201ENST00000365667 134 ntBASIC3.01□□□□□ -1.93
H3BM21 MIR1262-201ENST00000408276 93 ntBASIC3.01□□□□□ -1.93
H3BM21 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.01□□□□□ -1.93
H3BM21 SCARNA11.3-201ENST00000517276 130 ntBASIC3.01□□□□□ -1.93
H3BM21 AP000753.3-201ENST00000604083 169 ntBASIC3.01□□□□□ -1.93
H3BM21 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
H3BM21 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.01□□□□□ -1.93
H3BM21 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
H3BM21 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3□□□□□ -1.93
H3BM21 Y_RNA.12-201ENST00000362393 112 ntBASIC3□□□□□ -1.93
H3BM21 RNU6-301P-201ENST00000384277 107 ntBASIC3□□□□□ -1.93
H3BM21 SNORA54-201ENST00000384281 123 ntBASIC3□□□□□ -1.93
H3BM21 SNORD28B-201ENST00000390993 75 ntBASIC3□□□□□ -1.93
H3BM21 SNORA26.7-201ENST00000391288 122 ntBASIC3□□□□□ -1.93
H3BM21 EEF1A1P41-201ENST00000414667 207 ntBASIC3□□□□□ -1.93
H3BM21 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
H3BM21 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
H3BM21 Y_RNA.354-201ENST00000365448 111 ntBASIC2.99□□□□□ -1.93
H3BM21 MIR592-201ENST00000384959 97 ntBASIC2.99□□□□□ -1.93
H3BM21 MIR95-201ENST00000385072 81 ntBASIC2.99□□□□□ -1.93
H3BM21 U8.16-201ENST00000391279 133 ntBASIC2.99□□□□□ -1.93
H3BM21 AC092628.1-201ENST00000436250 252 ntBASIC2.99□□□□□ -1.93
H3BM21 HSPE1P24-201ENST00000450782 238 ntBASIC2.99□□□□□ -1.93
H3BM21 CYP2C59P-201ENST00000457790 269 ntBASIC2.99□□□□□ -1.93
H3BM21 SNORA48.11-201ENST00000517015 89 ntBASIC2.99□□□□□ -1.93
H3BM21 MIR3064-201ENST00000581130 66 ntBASIC2.99□□□□□ -1.93
H3BM21 MIR4536-1-201ENST00000583537 88 ntBASIC2.99□□□□□ -1.93
H3BM21 AC104996.3-201ENST00000590718 94 ntBASIC2.99□□□□□ -1.93
H3BM21 MIR7515-201ENST00000637837 67 ntBASIC2.99□□□□□ -1.93
H3BM21 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
H3BM21 SNORD21-201ENST00000383953 95 ntBASIC2.98□□□□□ -1.93
H3BM21 Y_RNA.443-201ENST00000384135 111 ntBASIC2.98□□□□□ -1.93
H3BM21 SNORA72.6-201ENST00000384520 129 ntBASIC2.98□□□□□ -1.93
H3BM21 MIR452-201ENST00000385020 85 ntBASIC2.98□□□□□ -1.93
H3BM21 MIR136-201ENST00000385207 82 ntBASIC2.98□□□□□ -1.93
H3BM21 RNA5SP274-201ENST00000410484 108 ntBASIC2.98□□□□□ -1.93
H3BM21 RNA5SP344-201ENST00000411081 104 ntBASIC2.98□□□□□ -1.93
H3BM21 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.98□□□□□ -1.93
H3BM21 AC093850.1-201ENST00000454121 251 ntBASIC2.98□□□□□ -1.93
H3BM21 RN7SL75P-201ENST00000461926 281 ntBASIC2.98□□□□□ -1.93
H3BM21 AC005908.1-201ENST00000468701 347 ntBASIC2.98□□□□□ -1.93
H3BM21 AC023790.1-201ENST00000482174 347 ntBASIC2.98□□□□□ -1.93
H3BM21 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.98□□□□□ -1.93
H3BM21 YWHAEP2-201ENST00000580066 112 ntBASIC2.98□□□□□ -1.93
H3BM21 MIR548AR-201ENST00000582191 57 ntBASIC2.98□□□□□ -1.93
H3BM21 YWHAEP3-201ENST00000582767 121 ntBASIC2.98□□□□□ -1.93
H3BM21 MIR4672-201ENST00000583126 81 ntBASIC2.98□□□□□ -1.93
H3BM21 AL033523.1-201ENST00000605153 153 ntBASIC2.98□□□□□ -1.93
H3BM21 MIR8055-201ENST00000610739 97 ntBASIC2.98□□□□□ -1.93
H3BM21 MAPK10-266ENST00000641066 6555 ntBASIC2.98□□□□□ -1.93
H3BM21 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
H3BM21 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
H3BM21 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
H3BM21 Y_RNA.36-201ENST00000362602 112 ntBASIC2.97□□□□□ -1.93
H3BM21 RNU6-330P-201ENST00000363015 107 ntBASIC2.97□□□□□ -1.93
H3BM21 Y_RNA.491-201ENST00000384417 107 ntBASIC2.97□□□□□ -1.93
H3BM21 RNU6-851P-201ENST00000384565 107 ntBASIC2.97□□□□□ -1.93
H3BM21 RNU6-1328P-201ENST00000410938 106 ntBASIC2.97□□□□□ -1.93
H3BM21 SNRPGP12-201ENST00000449481 213 ntBASIC2.97□□□□□ -1.93
H3BM21 RN7SL20P-201ENST00000488827 297 ntBASIC2.97□□□□□ -1.93
H3BM21 RNU6-667P-201ENST00000517186 102 ntBASIC2.97□□□□□ -1.93
H3BM21 AC133485.1-201ENST00000567176 124 ntBASIC2.97□□□□□ -1.93
H3BM21 AC090897.1-201ENST00000580909 226 ntBASIC2.97□□□□□ -1.93
H3BM21 MIR3199-1-201ENST00000582434 88 ntBASIC2.97□□□□□ -1.93
H3BM21 AL356280.1-201ENST00000603614 379 ntBASIC2.97□□□□□ -1.93
H3BM21 AC006023.1-201ENST00000603944 259 ntBASIC2.97□□□□□ -1.93
H3BM21 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
H3BM21 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
H3BM21 RNA5SP126-201ENST00000365092 109 ntBASIC2.96□□□□□ -1.94
H3BM21 RNU6-132P-201ENST00000383863 107 ntBASIC2.96□□□□□ -1.94
H3BM21 RNU6-895P-201ENST00000384125 103 ntBASIC2.96□□□□□ -1.94
H3BM21 RNU6-160P-201ENST00000384591 107 ntBASIC2.96□□□□□ -1.94
H3BM21 SNORA46-201ENST00000384762 135 ntBASIC2.96□□□□□ -1.94
H3BM21 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.96□□□□□ -1.94
H3BM21 MICF-203ENST00000432679 129 ntBASIC2.96□□□□□ -1.94
H3BM21 SNORA31.10-201ENST00000516482 106 ntBASIC2.96□□□□□ -1.94
H3BM21 RPL12P50-201ENST00000603116 116 ntBASIC2.96□□□□□ -1.94
H3BM21 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
H3BM21 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
H3BM21 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.95□□□□□ -1.94
H3BM21 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
H3BM21 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.95□□□□□ -1.94
H3BM21 AC073325.2-201ENST00000339545 159 ntBASIC2.95□□□□□ -1.94
H3BM21 Y_RNA.99-201ENST00000363138 105 ntBASIC2.95□□□□□ -1.94
H3BM21 SNORA38-201ENST00000363946 132 ntBASIC2.95□□□□□ -1.94
H3BM21 RNY1P13-201ENST00000365030 105 ntBASIC2.95□□□□□ -1.94
H3BM21 MIR942-201ENST00000401111 86 ntBASIC2.95□□□□□ -1.94
H3BM21 RPL23AP6-201ENST00000446637 472 ntBASIC2.95□□□□□ -1.94
H3BM21 UQCRHP3-201ENST00000451503 251 ntBASIC2.95□□□□□ -1.94
H3BM21 snoU13.16-201ENST00000459350 104 ntBASIC2.95□□□□□ -1.94
H3BM21 SNORD123-201ENST00000459473 70 ntBASIC2.95□□□□□ -1.94
H3BM21 RNU6-850P-201ENST00000516934 103 ntBASIC2.95□□□□□ -1.94
H3BM21 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.95□□□□□ -1.94
H3BM21 SNORD14A-201ENST00000606526 91 ntBASIC2.95□□□□□ -1.94
H3BM21 MIR7157-201ENST00000635801 60 ntBASIC2.95□□□□□ -1.94
H3BM21 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 198.4 ms