Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AL031003.1-201ENST00000404229 172 ntBASIC-3.37□□□□□ -2.95
LINC01549A6NIU2 RNU6-1114P-201ENST00000516022 107 ntBASIC-3.37□□□□□ -2.95
LINC01549A6NIU2 RNU6-1247P-201ENST00000516622 98 ntBASIC-3.37□□□□□ -2.95
LINC01549A6NIU2 RNU6-1006P-201ENST00000516998 103 ntBASIC-3.37□□□□□ -2.95
LINC01549A6NIU2 U2.17-201ENST00000611454 95 ntBASIC-3.37□□□□□ -2.95
LINC01549A6NIU2 RNU6-83P-201ENST00000384568 112 ntBASIC-3.38□□□□□ -2.95
LINC01549A6NIU2 RNU4-70P-201ENST00000384579 139 ntBASIC-3.38□□□□□ -2.95
LINC01549A6NIU2 SNORD11-201ENST00000459124 84 ntBASIC-3.38□□□□□ -2.95
LINC01549A6NIU2 RNU6-287P-201ENST00000516230 98 ntBASIC-3.38□□□□□ -2.95
LINC01549A6NIU2 AC060788.1-201ENST00000521318 469 ntBASIC-3.38□□□□□ -2.95
LINC01549A6NIU2 AL359881.1-201ENST00000602916 267 ntBASIC-3.38□□□□□ -2.95
LINC01549A6NIU2 AL669831.3-213ENST00000636676 183 ntBASIC-3.38□□□□□ -2.95
LINC01549A6NIU2 Y_RNA.239-201ENST00000364444 113 ntBASIC-3.39□□□□□ -2.95
LINC01549A6NIU2 Y_RNA.353-201ENST00000365440 108 ntBASIC-3.39□□□□□ -2.95
LINC01549A6NIU2 RNU6-1329P-201ENST00000365664 107 ntBASIC-3.39□□□□□ -2.95
LINC01549A6NIU2 MRPL42P2-201ENST00000403169 426 ntBASIC-3.39□□□□□ -2.95
LINC01549A6NIU2 MIR548I2-201ENST00000408348 149 ntBASIC-3.39□□□□□ -2.95
LINC01549A6NIU2 Y_RNA.601-201ENST00000410500 113 ntBASIC-3.39□□□□□ -2.95
LINC01549A6NIU2 AF228730.4-201ENST00000421457 183 ntBASIC-3.39□□□□□ -2.95
LINC01549A6NIU2 RNU6-625P-201ENST00000459412 107 ntBASIC-3.39□□□□□ -2.95
LINC01549A6NIU2 MIR4723-201ENST00000585070 81 ntBASIC-3.39□□□□□ -2.95
LINC01549A6NIU2 RNU6-924P-201ENST00000362926 108 ntBASIC-3.4□□□□□ -2.95
LINC01549A6NIU2 RNU6-1310P-201ENST00000384153 107 ntBASIC-3.4□□□□□ -2.95
LINC01549A6NIU2 MIR507-201ENST00000385234 94 ntBASIC-3.4□□□□□ -2.95
LINC01549A6NIU2 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-3.4□□□□□ -2.95
LINC01549A6NIU2 RNU6-168P-201ENST00000516189 101 ntBASIC-3.4□□□□□ -2.95
LINC01549A6NIU2 RNU6-1220P-201ENST00000517126 108 ntBASIC-3.4□□□□□ -2.95
LINC01549A6NIU2 AC122108.2-201ENST00000611946 526 ntBASIC-3.4□□□□□ -2.95
LINC01549A6NIU2 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-3.4□□□□□ -2.95
LINC01549A6NIU2 SEPT14P19-203ENST00000633205 211 ntBASIC-3.4□□□□□ -2.95
LINC01549A6NIU2 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-3.4□□□□□ -2.95
LINC01549A6NIU2 MIR342-201ENST00000362212 99 ntBASIC-3.41□□□□□ -2.96
LINC01549A6NIU2 Y_RNA.346-201ENST00000365385 112 ntBASIC-3.41□□□□□ -2.96
LINC01549A6NIU2 RNU2-31P-201ENST00000516954 155 ntBASIC-3.41□□□□□ -2.96
LINC01549A6NIU2 AP003181.2-201ENST00000528941 181 ntBASIC-3.41□□□□□ -2.96
LINC01549A6NIU2 AC127455.1-201ENST00000565496 145 ntBASIC-3.41□□□□□ -2.96
LINC01549A6NIU2 MIR6888-201ENST00000621977 67 ntBASIC-3.41□□□□□ -2.96
LINC01549A6NIU2 RNU5F-6P-201ENST00000362979 116 ntBASIC-3.42□□□□□ -2.96
LINC01549A6NIU2 Y_RNA.436-201ENST00000384097 102 ntBASIC-3.42□□□□□ -2.96
LINC01549A6NIU2 RNU6-1145P-201ENST00000384246 107 ntBASIC-3.42□□□□□ -2.96
LINC01549A6NIU2 RNU6-933P-201ENST00000384424 107 ntBASIC-3.42□□□□□ -2.96
LINC01549A6NIU2 Y_RNA.578-201ENST00000390903 88 ntBASIC-3.42□□□□□ -2.96
LINC01549A6NIU2 Y_RNA.587-201ENST00000391210 103 ntBASIC-3.42□□□□□ -2.96
LINC01549A6NIU2 SNORD63B-201ENST00000411005 70 ntBASIC-3.42□□□□□ -2.96
LINC01549A6NIU2 AC112204.1-201ENST00000502591 103 ntBASIC-3.42□□□□□ -2.96
LINC01549A6NIU2 RNU6-118P-201ENST00000516552 102 ntBASIC-3.42□□□□□ -2.96
LINC01549A6NIU2 MIR4703-201ENST00000577728 79 ntBASIC-3.42□□□□□ -2.96
LINC01549A6NIU2 Y_RNA.175-201ENST00000363794 111 ntBASIC-3.43□□□□□ -2.96
LINC01549A6NIU2 Y_RNA.215-201ENST00000364204 112 ntBASIC-3.43□□□□□ -2.96
LINC01549A6NIU2 RNU6-809P-201ENST00000384461 107 ntBASIC-3.43□□□□□ -2.96
LINC01549A6NIU2 AL353691.2-201ENST00000443795 59 ntBASIC-3.43□□□□□ -2.96
LINC01549A6NIU2 MIR4756-201ENST00000577874 78 ntBASIC-3.43□□□□□ -2.96
LINC01549A6NIU2 AP003357.1-201ENST00000604497 148 ntBASIC-3.43□□□□□ -2.96
LINC01549A6NIU2 AL357078.3-201ENST00000607528 618 ntBASIC-3.43□□□□□ -2.96
LINC01549A6NIU2 SNORA22.1-201ENST00000362701 134 ntBASIC-3.44□□□□□ -2.96
LINC01549A6NIU2 SNORA20-201ENST00000384662 132 ntBASIC-3.44□□□□□ -2.96
LINC01549A6NIU2 RNU7-35P-201ENST00000517174 62 ntBASIC-3.44□□□□□ -2.96
LINC01549A6NIU2 MIR548H3-201ENST00000408771 118 ntBASIC-3.45□□□□□ -2.96
LINC01549A6NIU2 AL365203.2-201ENST00000423444 196 ntBASIC-3.45□□□□□ -2.96
LINC01549A6NIU2 MTND2P3-201ENST00000452458 470 ntBASIC-3.45□□□□□ -2.96
LINC01549A6NIU2 AC024909.2-201ENST00000553035 286 ntBASIC-3.45□□□□□ -2.96
LINC01549A6NIU2 Y_RNA.103-201ENST00000363171 102 ntBASIC-3.46□□□□□ -2.96
LINC01549A6NIU2 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-3.46□□□□□ -2.96
LINC01549A6NIU2 RNU6-397P-201ENST00000516226 104 ntBASIC-3.46□□□□□ -2.96
LINC01549A6NIU2 Y_RNA.97-201ENST00000363094 102 ntBASIC-3.47□□□□□ -2.96
LINC01549A6NIU2 SNORD114-4-201ENST00000363962 75 ntBASIC-3.47□□□□□ -2.96
LINC01549A6NIU2 Y_RNA.212-201ENST00000364177 102 ntBASIC-3.47□□□□□ -2.96
LINC01549A6NIU2 Y_RNA.284-201ENST00000364806 102 ntBASIC-3.47□□□□□ -2.96
LINC01549A6NIU2 RNU6-169P-201ENST00000365336 107 ntBASIC-3.47□□□□□ -2.96
LINC01549A6NIU2 Y_RNA.440-201ENST00000384120 114 ntBASIC-3.47□□□□□ -2.96
LINC01549A6NIU2 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-3.47□□□□□ -2.96
LINC01549A6NIU2 AC009961.2-201ENST00000435771 251 ntBASIC-3.47□□□□□ -2.96
LINC01549A6NIU2 RNU6-1333P-201ENST00000516162 93 ntBASIC-3.47□□□□□ -2.96
LINC01549A6NIU2 SNORD27.1-201ENST00000516319 72 ntBASIC-3.47□□□□□ -2.96
LINC01549A6NIU2 AC124303.1-201ENST00000605703 360 ntBASIC-3.47□□□□□ -2.96
LINC01549A6NIU2 RNU4-50P-201ENST00000364361 141 ntBASIC-3.48□□□□□ -2.97
LINC01549A6NIU2 SNORD115-22-201ENST00000364456 82 ntBASIC-3.48□□□□□ -2.97
LINC01549A6NIU2 MIR1278-201ENST00000408753 81 ntBASIC-3.48□□□□□ -2.97
LINC01549A6NIU2 MTND3P21-201ENST00000433774 331 ntBASIC-3.48□□□□□ -2.97
LINC01549A6NIU2 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-3.48□□□□□ -2.97
LINC01549A6NIU2 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-3.48□□□□□ -2.97
LINC01549A6NIU2 AC006386.1-201ENST00000619436 415 ntBASIC-3.48□□□□□ -2.97
LINC01549A6NIU2 USP9YP23-201ENST00000455085 407 ntBASIC-3.49□□□□□ -2.97
LINC01549A6NIU2 RNU1-54P-201ENST00000517181 120 ntBASIC-3.49□□□□□ -2.97
LINC01549A6NIU2 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-3.49□□□□□ -2.97
LINC01549A6NIU2 Y_RNA.27-201ENST00000362540 103 ntBASIC-3.5□□□□□ -2.97
LINC01549A6NIU2 RNU4-10P-201ENST00000364383 140 ntBASIC-3.5□□□□□ -2.97
LINC01549A6NIU2 MIR216B-201ENST00000390186 82 ntBASIC-3.5□□□□□ -2.97
LINC01549A6NIU2 RNU7-137P-201ENST00000516788 62 ntBASIC-3.5□□□□□ -2.97
LINC01549A6NIU2 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-3.5□□□□□ -2.97
LINC01549A6NIU2 MIR548O2-201ENST00000616090 70 ntBASIC-3.5□□□□□ -2.97
LINC01549A6NIU2 RNU5B-4P-201ENST00000363508 111 ntBASIC-3.51□□□□□ -2.97
LINC01549A6NIU2 MTND3P23-201ENST00000431980 347 ntBASIC-3.51□□□□□ -2.97
LINC01549A6NIU2 AC016550.1-201ENST00000505348 785 ntBASIC-3.51□□□□□ -2.97
LINC01549A6NIU2 RNU6-1028P-201ENST00000517164 93 ntBASIC-3.51□□□□□ -2.97
LINC01549A6NIU2 AC103705.1-201ENST00000619013 241 ntBASIC-3.51□□□□□ -2.97
LINC01549A6NIU2 Y_RNA.10-201ENST00000362371 110 ntBASIC-3.52□□□□□ -2.97
LINC01549A6NIU2 RNU6-170P-201ENST00000362832 104 ntBASIC-3.52□□□□□ -2.97
LINC01549A6NIU2 SNORD116-9-201ENST00000384000 95 ntBASIC-3.52□□□□□ -2.97
LINC01549A6NIU2 SNORD116-3-201ENST00000384287 95 ntBASIC-3.52□□□□□ -2.97
Retrieved 100 of 98,524 protein–RNA pairs in 212.5 ms