Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 AL023284.1-201ENST00000403956 276 ntBASIC3.49□□□□□ -1.85
PCDHGA4Q9Y5G9 AC104332.2-201ENST00000429959 156 ntBASIC3.49□□□□□ -1.85
PCDHGA4Q9Y5G9 MIR3064-201ENST00000581130 66 ntBASIC3.49□□□□□ -1.85
PCDHGA4Q9Y5G9 MIR3616-201ENST00000584070 92 ntBASIC3.49□□□□□ -1.85
PCDHGA4Q9Y5G9 NEAT1_2.1-201ENST00000620525 105 ntBASIC3.49□□□□□ -1.85
PCDHGA4Q9Y5G9 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.49□□□□□ -1.85
PCDHGA4Q9Y5G9 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHGA4Q9Y5G9 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHGA4Q9Y5G9 U8.9-201ENST00000365667 134 ntBASIC3.48□□□□□ -1.85
PCDHGA4Q9Y5G9 RNU6-949P-201ENST00000384040 107 ntBASIC3.48□□□□□ -1.85
PCDHGA4Q9Y5G9 MIR29C-201ENST00000385231 88 ntBASIC3.48□□□□□ -1.85
PCDHGA4Q9Y5G9 MIR548U-201ENST00000390728 81 ntBASIC3.48□□□□□ -1.85
PCDHGA4Q9Y5G9 AC115115.1-201ENST00000449927 248 ntBASIC3.48□□□□□ -1.85
PCDHGA4Q9Y5G9 RPS29P12-201ENST00000460178 152 ntBASIC3.48□□□□□ -1.85
PCDHGA4Q9Y5G9 AC005908.1-201ENST00000468701 347 ntBASIC3.48□□□□□ -1.85
PCDHGA4Q9Y5G9 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
PCDHGA4Q9Y5G9 AC021506.2-201ENST00000612354 169 ntBASIC3.48□□□□□ -1.85
PCDHGA4Q9Y5G9 AL662814.1-201ENST00000617364 121 ntBASIC3.48□□□□□ -1.85
PCDHGA4Q9Y5G9 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PCDHGA4Q9Y5G9 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHGA4Q9Y5G9 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHGA4Q9Y5G9 SNORD9-201ENST00000362566 104 ntBASIC3.47□□□□□ -1.85
PCDHGA4Q9Y5G9 RNU1-70P-201ENST00000362618 164 ntBASIC3.47□□□□□ -1.85
PCDHGA4Q9Y5G9 RNU1-33P-201ENST00000364249 162 ntBASIC3.47□□□□□ -1.85
PCDHGA4Q9Y5G9 Y_RNA.491-201ENST00000384417 107 ntBASIC3.47□□□□□ -1.85
PCDHGA4Q9Y5G9 SNORA48.2-201ENST00000390926 124 ntBASIC3.47□□□□□ -1.85
PCDHGA4Q9Y5G9 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHGA4Q9Y5G9 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
PCDHGA4Q9Y5G9 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.46□□□□□ -1.85
PCDHGA4Q9Y5G9 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PCDHGA4Q9Y5G9 Y_RNA.12-201ENST00000362393 112 ntBASIC3.46□□□□□ -1.86
PCDHGA4Q9Y5G9 RNU6-132P-201ENST00000383863 107 ntBASIC3.46□□□□□ -1.86
PCDHGA4Q9Y5G9 RNU7-156P-201ENST00000517214 74 ntBASIC3.46□□□□□ -1.86
PCDHGA4Q9Y5G9 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDHGA4Q9Y5G9 AC138749.4-201ENST00000563970 127 ntBASIC3.46□□□□□ -1.86
PCDHGA4Q9Y5G9 MIR548AO-201ENST00000579992 96 ntBASIC3.46□□□□□ -1.86
PCDHGA4Q9Y5G9 SCARNA4.1-201ENST00000628597 123 ntBASIC3.46□□□□□ -1.86
PCDHGA4Q9Y5G9 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDHGA4Q9Y5G9 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDHGA4Q9Y5G9 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.45□□□□□ -1.86
PCDHGA4Q9Y5G9 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PCDHGA4Q9Y5G9 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PCDHGA4Q9Y5G9 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PCDHGA4Q9Y5G9 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
PCDHGA4Q9Y5G9 WWP1P1-201ENST00000466609 2769 ntBASIC3.45□□□□□ -1.86
PCDHGA4Q9Y5G9 SNORD115-31-201ENST00000365318 82 ntBASIC3.45□□□□□ -1.86
PCDHGA4Q9Y5G9 RNU6-499P-201ENST00000365615 107 ntBASIC3.45□□□□□ -1.86
PCDHGA4Q9Y5G9 SNORA8.1-201ENST00000384250 140 ntBASIC3.45□□□□□ -1.86
PCDHGA4Q9Y5G9 MIR128-1-201ENST00000384921 82 ntBASIC3.45□□□□□ -1.86
PCDHGA4Q9Y5G9 RNA5SP120-201ENST00000410900 112 ntBASIC3.45□□□□□ -1.86
PCDHGA4Q9Y5G9 RNU6-579P-201ENST00000516879 102 ntBASIC3.45□□□□□ -1.86
PCDHGA4Q9Y5G9 RNU4ATAC9P-201ENST00000517146 126 ntBASIC3.45□□□□□ -1.86
PCDHGA4Q9Y5G9 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.45□□□□□ -1.86
PCDHGA4Q9Y5G9 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.45□□□□□ -1.86
PCDHGA4Q9Y5G9 YWHAEP2-201ENST00000580066 112 ntBASIC3.45□□□□□ -1.86
PCDHGA4Q9Y5G9 MIR4764-201ENST00000580680 88 ntBASIC3.45□□□□□ -1.86
PCDHGA4Q9Y5G9 YWHAEP3-201ENST00000582767 121 ntBASIC3.45□□□□□ -1.86
PCDHGA4Q9Y5G9 SNORD92-201ENST00000585078 85 ntBASIC3.45□□□□□ -1.86
PCDHGA4Q9Y5G9 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.45□□□□□ -1.86
PCDHGA4Q9Y5G9 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHGA4Q9Y5G9 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHGA4Q9Y5G9 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.44□□□□□ -1.86
PCDHGA4Q9Y5G9 AL161722.3-201ENST00000605789 2983 ntBASIC3.44□□□□□ -1.86
PCDHGA4Q9Y5G9 SNORD36A-201ENST00000362874 73 ntBASIC3.44□□□□□ -1.86
PCDHGA4Q9Y5G9 MIR887-201ENST00000401258 79 ntBASIC3.44□□□□□ -1.86
PCDHGA4Q9Y5G9 BX276092.1-201ENST00000427368 251 ntBASIC3.44□□□□□ -1.86
PCDHGA4Q9Y5G9 AC005326.1-201ENST00000429197 123 ntBASIC3.44□□□□□ -1.86
PCDHGA4Q9Y5G9 AL356274.2-201ENST00000624379 3752 ntBASIC3.43□□□□□ -1.86
PCDHGA4Q9Y5G9 SNORA38.1-201ENST00000364172 131 ntBASIC3.43□□□□□ -1.86
PCDHGA4Q9Y5G9 RNA5SP42-201ENST00000364278 115 ntBASIC3.43□□□□□ -1.86
PCDHGA4Q9Y5G9 RNU6-283P-201ENST00000364788 107 ntBASIC3.43□□□□□ -1.86
PCDHGA4Q9Y5G9 Y_RNA.283-201ENST00000364798 112 ntBASIC3.43□□□□□ -1.86
PCDHGA4Q9Y5G9 SNORD21-201ENST00000383953 95 ntBASIC3.43□□□□□ -1.86
PCDHGA4Q9Y5G9 RNU6-243P-201ENST00000391140 107 ntBASIC3.43□□□□□ -1.86
PCDHGA4Q9Y5G9 RNU6-1254P-201ENST00000391266 104 ntBASIC3.43□□□□□ -1.86
PCDHGA4Q9Y5G9 RNU6-141P-201ENST00000410499 105 ntBASIC3.43□□□□□ -1.86
PCDHGA4Q9Y5G9 AC006989.1-201ENST00000427212 131 ntBASIC3.43□□□□□ -1.86
PCDHGA4Q9Y5G9 RNU6-75P-201ENST00000515944 104 ntBASIC3.43□□□□□ -1.86
PCDHGA4Q9Y5G9 MIR4709-201ENST00000577272 72 ntBASIC3.43□□□□□ -1.86
PCDHGA4Q9Y5G9 AC005520.4-201ENST00000604337 90 ntBASIC3.43□□□□□ -1.86
PCDHGA4Q9Y5G9 MIR7851-201ENST00000610611 160 ntBASIC3.43□□□□□ -1.86
PCDHGA4Q9Y5G9 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHGA4Q9Y5G9 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.42□□□□□ -1.86
PCDHGA4Q9Y5G9 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHGA4Q9Y5G9 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
PCDHGA4Q9Y5G9 RNU6-461P-201ENST00000364195 107 ntBASIC3.42□□□□□ -1.86
PCDHGA4Q9Y5G9 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
PCDHGA4Q9Y5G9 AC019129.1-201ENST00000403786 261 ntBASIC3.42□□□□□ -1.86
PCDHGA4Q9Y5G9 RNU2-7P-201ENST00000410794 178 ntBASIC3.42□□□□□ -1.86
PCDHGA4Q9Y5G9 BX510359.4-201ENST00000423750 193 ntBASIC3.42□□□□□ -1.86
PCDHGA4Q9Y5G9 RNU2-27P-201ENST00000516185 142 ntBASIC3.42□□□□□ -1.86
PCDHGA4Q9Y5G9 MIR8057-201ENST00000620957 69 ntBASIC3.42□□□□□ -1.86
PCDHGA4Q9Y5G9 AP003355.3-201ENST00000623465 114 ntBASIC3.42□□□□□ -1.86
PCDHGA4Q9Y5G9 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHGA4Q9Y5G9 MIR9-2-201ENST00000384838 87 ntBASIC3.41□□□□□ -1.86
PCDHGA4Q9Y5G9 MIR520A-201ENST00000384862 85 ntBASIC3.41□□□□□ -1.86
PCDHGA4Q9Y5G9 HMGN2P39-201ENST00000398005 273 ntBASIC3.41□□□□□ -1.86
PCDHGA4Q9Y5G9 RNA5SP344-201ENST00000411081 104 ntBASIC3.41□□□□□ -1.86
PCDHGA4Q9Y5G9 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDHGA4Q9Y5G9 SNORA70.18-201ENST00000516696 98 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 482.7 ms