Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PCDHGC4Q9Y5F7 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.83□□□□□ -1.96
PCDHGC4Q9Y5F7 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
PCDHGC4Q9Y5F7 RNU6-633P-201ENST00000362612 103 ntBASIC2.82□□□□□ -1.96
PCDHGC4Q9Y5F7 RNU6-776P-201ENST00000364403 104 ntBASIC2.82□□□□□ -1.96
PCDHGC4Q9Y5F7 RNU6-1022P-201ENST00000365049 104 ntBASIC2.82□□□□□ -1.96
PCDHGC4Q9Y5F7 MIR206-201ENST00000384872 86 ntBASIC2.82□□□□□ -1.96
PCDHGC4Q9Y5F7 MIR29C-201ENST00000385231 88 ntBASIC2.82□□□□□ -1.96
PCDHGC4Q9Y5F7 RNU6-1307P-201ENST00000391012 103 ntBASIC2.82□□□□□ -1.96
PCDHGC4Q9Y5F7 AC087499.2-201ENST00000432861 149 ntBASIC2.82□□□□□ -1.96
PCDHGC4Q9Y5F7 HMGN1P33-201ENST00000432945 451 ntBASIC2.82□□□□□ -1.96
PCDHGC4Q9Y5F7 SNORD123-201ENST00000459473 70 ntBASIC2.82□□□□□ -1.96
PCDHGC4Q9Y5F7 AC079600.2-201ENST00000550076 130 ntBASIC2.82□□□□□ -1.96
PCDHGC4Q9Y5F7 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
PCDHGC4Q9Y5F7 MIR449A-201ENST00000362113 91 ntBASIC2.81□□□□□ -1.96
PCDHGC4Q9Y5F7 RNU6-342P-201ENST00000384521 104 ntBASIC2.81□□□□□ -1.96
PCDHGC4Q9Y5F7 Y_RNA.607-201ENST00000410597 98 ntBASIC2.81□□□□□ -1.96
PCDHGC4Q9Y5F7 RPS29P28-201ENST00000446439 141 ntBASIC2.81□□□□□ -1.96
PCDHGC4Q9Y5F7 AC003982.1-202ENST00000469928 248 ntBASIC2.81□□□□□ -1.96
PCDHGC4Q9Y5F7 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.81□□□□□ -1.96
PCDHGC4Q9Y5F7 RN7SKP132-201ENST00000516001 208 ntBASIC2.81□□□□□ -1.96
PCDHGC4Q9Y5F7 SEPT14P17-201ENST00000617978 177 ntBASIC2.81□□□□□ -1.96
PCDHGC4Q9Y5F7 SNORD3E-202ENST00000627253 216 ntBASIC2.81□□□□□ -1.96
PCDHGC4Q9Y5F7 AC108206.1-201ENST00000570186 4159 ntBASIC2.81□□□□□ -1.96
PCDHGC4Q9Y5F7 AL161431.1-201ENST00000618966 4205 ntBASIC2.8□□□□□ -1.96
PCDHGC4Q9Y5F7 RNU1-112P-201ENST00000364401 164 ntBASIC2.8□□□□□ -1.96
PCDHGC4Q9Y5F7 RNA5SP126-201ENST00000365092 109 ntBASIC2.8□□□□□ -1.96
PCDHGC4Q9Y5F7 MIR34C-201ENST00000384831 77 ntBASIC2.8□□□□□ -1.96
PCDHGC4Q9Y5F7 MIR597-201ENST00000384968 97 ntBASIC2.8□□□□□ -1.96
PCDHGC4Q9Y5F7 AL445685.2-201ENST00000422551 342 ntBASIC2.8□□□□□ -1.96
PCDHGC4Q9Y5F7 AC245047.7-201ENST00000440265 293 ntBASIC2.8□□□□□ -1.96
PCDHGC4Q9Y5F7 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.8□□□□□ -1.96
PCDHGC4Q9Y5F7 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.8□□□□□ -1.96
PCDHGC4Q9Y5F7 AC104984.5-201ENST00000586878 94 ntBASIC2.8□□□□□ -1.96
PCDHGC4Q9Y5F7 AL449363.1-201ENST00000617815 186 ntBASIC2.8□□□□□ -1.96
PCDHGC4Q9Y5F7 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
PCDHGC4Q9Y5F7 AL355596.1-201ENST00000565399 3996 ntBASIC2.8□□□□□ -1.96
PCDHGC4Q9Y5F7 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PCDHGC4Q9Y5F7 AC005336.3-201ENST00000623833 2679 ntBASIC2.79□□□□□ -1.96
PCDHGC4Q9Y5F7 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.79□□□□□ -1.96
PCDHGC4Q9Y5F7 RNU11-3P-201ENST00000391111 133 ntBASIC2.79□□□□□ -1.96
PCDHGC4Q9Y5F7 AL138827.1-201ENST00000402666 306 ntBASIC2.79□□□□□ -1.96
PCDHGC4Q9Y5F7 AC073261.1-201ENST00000429409 121 ntBASIC2.79□□□□□ -1.96
PCDHGC4Q9Y5F7 AC105272.1-201ENST00000438604 198 ntBASIC2.79□□□□□ -1.96
PCDHGC4Q9Y5F7 SCARNA16.3-201ENST00000516595 184 ntBASIC2.79□□□□□ -1.96
PCDHGC4Q9Y5F7 RNU6-56P-201ENST00000516986 93 ntBASIC2.79□□□□□ -1.96
PCDHGC4Q9Y5F7 MIR4672-201ENST00000583126 81 ntBASIC2.79□□□□□ -1.96
PCDHGC4Q9Y5F7 RNU1-109P-201ENST00000383960 147 ntBASIC2.78□□□□□ -1.96
PCDHGC4Q9Y5F7 MIR526A1-201ENST00000384897 85 ntBASIC2.78□□□□□ -1.96
PCDHGC4Q9Y5F7 GTF3AP2-201ENST00000557014 266 ntBASIC2.78□□□□□ -1.96
PCDHGC4Q9Y5F7 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.78□□□□□ -1.96
PCDHGC4Q9Y5F7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.78□□□□□ -1.96
PCDHGC4Q9Y5F7 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PCDHGC4Q9Y5F7 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
PCDHGC4Q9Y5F7 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.77□□□□□ -1.97
PCDHGC4Q9Y5F7 MIR26A1-201ENST00000362205 77 ntBASIC2.77□□□□□ -1.97
PCDHGC4Q9Y5F7 RNU1-91P-201ENST00000364746 163 ntBASIC2.77□□□□□ -1.97
PCDHGC4Q9Y5F7 Y_RNA.316-201ENST00000365118 111 ntBASIC2.77□□□□□ -1.97
PCDHGC4Q9Y5F7 Y_RNA.537-201ENST00000384626 109 ntBASIC2.77□□□□□ -1.97
PCDHGC4Q9Y5F7 Y_RNA.567-201ENST00000384736 106 ntBASIC2.77□□□□□ -1.97
PCDHGC4Q9Y5F7 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.77□□□□□ -1.97
PCDHGC4Q9Y5F7 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.77□□□□□ -1.97
PCDHGC4Q9Y5F7 RN7SL499P-201ENST00000481141 276 ntBASIC2.77□□□□□ -1.97
PCDHGC4Q9Y5F7 RNU7-35P-201ENST00000517174 62 ntBASIC2.77□□□□□ -1.97
PCDHGC4Q9Y5F7 MIR6715A-201ENST00000615929 79 ntBASIC2.77□□□□□ -1.97
PCDHGC4Q9Y5F7 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PCDHGC4Q9Y5F7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PCDHGC4Q9Y5F7 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.76□□□□□ -1.97
PCDHGC4Q9Y5F7 RNU6-1244P-201ENST00000363614 108 ntBASIC2.76□□□□□ -1.97
PCDHGC4Q9Y5F7 RNU6-1067P-201ENST00000384752 107 ntBASIC2.76□□□□□ -1.97
PCDHGC4Q9Y5F7 MIR627-201ENST00000384979 97 ntBASIC2.76□□□□□ -1.97
PCDHGC4Q9Y5F7 AC104389.3-201ENST00000445629 235 ntBASIC2.76□□□□□ -1.97
PCDHGC4Q9Y5F7 Z96811.1-201ENST00000445880 108 ntBASIC2.76□□□□□ -1.97
PCDHGC4Q9Y5F7 RNU1-98P-201ENST00000458992 160 ntBASIC2.76□□□□□ -1.97
PCDHGC4Q9Y5F7 MIR3126-201ENST00000577443 74 ntBASIC2.76□□□□□ -1.97
PCDHGC4Q9Y5F7 MIR3605-201ENST00000583214 100 ntBASIC2.76□□□□□ -1.97
PCDHGC4Q9Y5F7 MIR8055-201ENST00000610739 97 ntBASIC2.76□□□□□ -1.97
PCDHGC4Q9Y5F7 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
PCDHGC4Q9Y5F7 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
PCDHGC4Q9Y5F7 RNU6-865P-201ENST00000364772 107 ntBASIC2.75□□□□□ -1.97
PCDHGC4Q9Y5F7 Y_RNA.448-201ENST00000384185 108 ntBASIC2.75□□□□□ -1.97
PCDHGC4Q9Y5F7 MIR548G-201ENST00000408442 89 ntBASIC2.75□□□□□ -1.97
PCDHGC4Q9Y5F7 RNU2-7P-201ENST00000410794 178 ntBASIC2.75□□□□□ -1.97
PCDHGC4Q9Y5F7 snoU13.16-201ENST00000459350 104 ntBASIC2.75□□□□□ -1.97
PCDHGC4Q9Y5F7 SNORD67.1-201ENST00000516618 108 ntBASIC2.75□□□□□ -1.97
PCDHGC4Q9Y5F7 AC021506.2-201ENST00000612354 169 ntBASIC2.75□□□□□ -1.97
PCDHGC4Q9Y5F7 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
PCDHGC4Q9Y5F7 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
PCDHGC4Q9Y5F7 Y_RNA.94-201ENST00000363068 106 ntBASIC2.74□□□□□ -1.97
PCDHGC4Q9Y5F7 SNORD115-27-201ENST00000364430 82 ntBASIC2.74□□□□□ -1.97
PCDHGC4Q9Y5F7 RNA5SP21-201ENST00000410917 96 ntBASIC2.74□□□□□ -1.97
PCDHGC4Q9Y5F7 RNU6-1086P-201ENST00000410930 100 ntBASIC2.74□□□□□ -1.97
PCDHGC4Q9Y5F7 RNA5SP344-201ENST00000411081 104 ntBASIC2.74□□□□□ -1.97
PCDHGC4Q9Y5F7 SPINT5P-201ENST00000448174 155 ntBASIC2.74□□□□□ -1.97
PCDHGC4Q9Y5F7 RNA5SP356-201ENST00000515972 94 ntBASIC2.74□□□□□ -1.97
PCDHGC4Q9Y5F7 RNVU1-2-201ENST00000516326 135 ntBASIC2.74□□□□□ -1.97
PCDHGC4Q9Y5F7 SNORA9.3-201ENST00000516383 129 ntBASIC2.74□□□□□ -1.97
PCDHGC4Q9Y5F7 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.74□□□□□ -1.97
PCDHGC4Q9Y5F7 RNU6-90P-201ENST00000606352 106 ntBASIC2.74□□□□□ -1.97
PCDHGC4Q9Y5F7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms